RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 CUX1P39880 1505 aa15.72■□□□□ 0.11
CDH5-201ENST00000341529 TMF1P82094 1093 aa15.71■□□□□ 0.11
CDH5-201ENST00000341529 PRKRIP1Q9H875 184 aaPredicted RBP15.71■□□□□ 0.11
CDH5-201ENST00000341529 RTN4Q9NQC3 1192 aaKnown RBP15.71■□□□□ 0.11
CDH5-201ENST00000341529 U2SURPO15042 1029 aaKnown RBP15.7■□□□□ 0.1
CDH5-201ENST00000341529 STK26Q9P289 416 aa15.7■□□□□ 0.1
CDH5-201ENST00000341529 CCDC18Q5T9S5 1454 aa15.69■□□□□ 0.1
CDH5-201ENST00000341529 ZBTB7CA1YPR0 619 aa15.69■□□□□ 0.1
CDH5-201ENST00000341529 ROCK2O75116 1388 aaKnown RBP15.69■□□□□ 0.1
CDH5-201ENST00000341529 CARMIL2Q6F5E8 1435 aa15.68■□□□□ 0.1
CDH5-201ENST00000341529 SOX12O15370 315 aa15.67■□□□□ 0.1
CDH5-201ENST00000341529 CYB5RLQ6IPT4 315 aa15.66■□□□□ 0.1
CDH5-201ENST00000341529 NOP58Q9Y2X3 529 aaKnown RBP15.66■□□□□ 0.1
CDH5-201ENST00000341529 TRHP20396 242 aaPredicted RBP15.66■□□□□ 0.1
CDH5-201ENST00000341529 CCDC146Q8IYE0 955 aa15.66■□□□□ 0.1
CDH5-201ENST00000341529 PLIN1O60240 522 aa15.66■□□□□ 0.1
CDH5-201ENST00000341529 C14orf37Q86TY3 774 aa15.65■□□□□ 0.1
CDH5-201ENST00000341529 RCAN3Q9UKA8 241 aa15.65■□□□□ 0.1
CDH5-201ENST00000341529 ANKRD30AQ9BXX3 1397 aa15.65■□□□□ 0.1
CDH5-201ENST00000341529 LRRC9Q6ZRR7 1453 aa15.64■□□□□ 0.09
CDH5-201ENST00000341529 KIF3BO15066 747 aa15.64■□□□□ 0.09
CDH5-201ENST00000341529 CDCA8Q53HL2 280 aa15.64■□□□□ 0.09
CDH5-201ENST00000341529 FGD6Q6ZV73 1430 aa15.64■□□□□ 0.09
CDH5-201ENST00000341529 CCDC184Q52MB2 194 aa15.63■□□□□ 0.09
CDH5-201ENST00000341529 POGKQ9P215 609 aa15.63■□□□□ 0.09
CDH5-201ENST00000341529 WASHC2AQ641Q2 1341 aa15.62■□□□□ 0.09
CDH5-201ENST00000341529 PRXQ9BXM0 1461 aa15.62■□□□□ 0.09
CDH5-201ENST00000341529 POLA1P09884 1462 aaPredicted RBP15.61■□□□□ 0.09
CDH5-201ENST00000341529 CFAP53Q96M91 514 aa15.6■□□□□ 0.09
CDH5-201ENST00000341529 UNC13AQ9UPW8 1703 aa15.6■□□□□ 0.09
CDH5-201ENST00000341529 FTSJ3Q8IY81 847 aaKnown RBP15.6■□□□□ 0.09
CDH5-201ENST00000341529 NUDCQ9Y266 331 aa15.6■□□□□ 0.09
CDH5-201ENST00000341529 KTN1Q86UP2 1357 aaKnown RBP15.59■□□□□ 0.09
CDH5-201ENST00000341529 SRPK2P78362 688 aaKnown RBP15.59■□□□□ 0.09
CDH5-201ENST00000341529 EFCAB2Q5VUJ9 269 aa15.58■□□□□ 0.08
CDH5-201ENST00000341529 MORC1Q86VD1 984 aa15.58■□□□□ 0.08
CDH5-201ENST00000341529 PANK3Q9H999 370 aa15.58■□□□□ 0.08
CDH5-201ENST00000341529 PTPRGP23470 1445 aa15.58■□□□□ 0.08
CDH5-201ENST00000341529 SPRYD3Q8NCJ5 442 aa15.58■□□□□ 0.08
CDH5-201ENST00000341529 TOPBP1Q92547 1522 aa15.58■□□□□ 0.08
CDH5-201ENST00000341529 KIF7Q2M1P5 1343 aa15.57■□□□□ 0.08
CDH5-201ENST00000341529 NBPF8Q3BBV2 869 aa15.57■□□□□ 0.08
CDH5-201ENST00000341529 CLUAP1Q96AJ1 413 aa15.57■□□□□ 0.08
CDH5-201ENST00000341529 USP47Q96K76 1375 aa15.56■□□□□ 0.08
CDH5-201ENST00000341529 RRP7AQ9Y3A4 280 aaKnown RBP15.56■□□□□ 0.08
CDH5-201ENST00000341529 RRBP1Q9P2E9 1410 aaKnown RBP15.56■□□□□ 0.08
CDH5-201ENST00000341529 TPRNQ4KMQ1 711 aa15.54■□□□□ 0.08
CDH5-201ENST00000341529 EXOC6Q8TAG9 804 aa15.54■□□□□ 0.08
CDH5-201ENST00000341529 TRAK1Q9UPV9 953 aa15.54■□□□□ 0.08
CDH5-201ENST00000341529 NLRP13Q86W25 1043 aa15.54■□□□□ 0.08
CDH5-201ENST00000341529 MAPK8IP3Q9UPT6 1336 aa15.54■□□□□ 0.08
CDH5-201ENST00000341529 MYOM3Q5VTT5 1437 aa15.53■□□□□ 0.08
CDH5-201ENST00000341529 DEKP35659 375 aaKnown RBP15.52■□□□□ 0.08
CDH5-201ENST00000341529 U2AF1L5P0DN76 240 aaPredicted RBP15.52■□□□□ 0.07
CDH5-201ENST00000341529 U2AF1Q01081 240 aaKnown RBP eCLIP15.52■□□□□ 0.07
CDH5-201ENST00000341529 NCOA2Q15596 1464 aa15.52■□□□□ 0.07
CDH5-201ENST00000341529 RALBP1Q15311 655 aa15.52■□□□□ 0.07
CDH5-201ENST00000341529 BCL2L13Q9BXK5 485 aa15.52■□□□□ 0.07
CDH5-201ENST00000341529 TOP2BQ02880 1626 aa15.51■□□□□ 0.07
CDH5-201ENST00000341529 SPAG9O60271 1321 aaKnown RBP15.5■□□□□ 0.07
CDH5-201ENST00000341529 SLC4A3P48751 1232 aa15.5■□□□□ 0.07
CDH5-201ENST00000341529 UACAQ9BZF9 1416 aa15.5■□□□□ 0.07
CDH5-201ENST00000341529 CCDC7Q96M83 1385 aa15.49■□□□□ 0.07
CDH5-201ENST00000341529 AFAP1Q8N556 730 aa15.49■□□□□ 0.07
CDH5-201ENST00000341529 HMGXB3Q12766 1538 aa15.48■□□□□ 0.07
CDH5-201ENST00000341529 NUTM2FA1L443 756 aa15.48■□□□□ 0.07
CDH5-201ENST00000341529 DDRGK1Q96HY6 314 aa15.48■□□□□ 0.07
CDH5-201ENST00000341529 NBPF1Q3BBV0 1214 aa15.47■□□□□ 0.07
CDH5-201ENST00000341529 LMOD2Q6P5Q4 547 aa15.47■□□□□ 0.07
CDH5-201ENST00000341529 MYH16Q9H6N6 1097 aa15.47■□□□□ 0.07
CDH5-201ENST00000341529 WDR97A6NE52 1622 aa15.47■□□□□ 0.07
CDH5-201ENST00000341529 C11orf95C9JLR9 678 aaPredicted RBP15.46■□□□□ 0.07
CDH5-201ENST00000341529 APBB1O00213 710 aa15.46■□□□□ 0.07
CDH5-201ENST00000341529 CASKIN1Q8WXD9 1431 aa15.46■□□□□ 0.07
CDH5-201ENST00000341529 ZBED9Q6R2W3 1325 aa15.45■□□□□ 0.06
CDH5-201ENST00000341529 KANK1Q14678 1352 aa15.45■□□□□ 0.06
CDH5-201ENST00000341529 CDCA7LQ96GN5 454 aa15.45■□□□□ 0.06
CDH5-201ENST00000341529 SLKQ9H2G2 1235 aaPredicted RBP15.45■□□□□ 0.06
CDH5-201ENST00000341529 CCDC144AA2RUR9 1427 aa15.44■□□□□ 0.06
CDH5-201ENST00000341529 BECN1Q14457 450 aa15.44■□□□□ 0.06
CDH5-201ENST00000341529 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
CDH5-201ENST00000341529 MYBBP1AQ9BQG0 1328 aaKnown RBP15.43■□□□□ 0.06
CDH5-201ENST00000341529 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
CDH5-201ENST00000341529 A0A0G2JS52 829 aa15.43■□□□□ 0.06
CDH5-201ENST00000341529 GOLGA2Q08379 1002 aa15.43■□□□□ 0.06
CDH5-201ENST00000341529 APAF1O14727 1248 aa15.43■□□□□ 0.06
CDH5-201ENST00000341529 PRG4Q92954 1404 aaPredicted RBP15.42■□□□□ 0.06
CDH5-201ENST00000341529 CRBNQ96SW2 442 aa15.41■□□□□ 0.06
CDH5-201ENST00000341529 PRDM2Q13029 1718 aa15.41■□□□□ 0.06
CDH5-201ENST00000341529 GRIN2BQ13224 1484 aa15.41■□□□□ 0.06
CDH5-201ENST00000341529 KIF15Q9NS87 1388 aa15.4■□□□□ 0.06
CDH5-201ENST00000341529 NCLP19338 710 aaKnown RBP15.4■□□□□ 0.06
CDH5-201ENST00000341529 ZNF608Q9ULD9 1512 aaPredicted RBP15.4■□□□□ 0.06
CDH5-201ENST00000341529 WASHC2CQ9Y4E1 1318 aa15.39■□□□□ 0.06
CDH5-201ENST00000341529 ELL2O00472 640 aaPredicted RBP15.39■□□□□ 0.05
CDH5-201ENST00000341529 SNAPC4Q5SXM2 1469 aa15.39■□□□□ 0.05
CDH5-201ENST00000341529 ERICH6BQ5W0A0 696 aa15.39■□□□□ 0.05
CDH5-201ENST00000341529 RRP1P56182 461 aaKnown RBP15.38■□□□□ 0.05
CDH5-201ENST00000341529 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.38■□□□□ 0.05
CDH5-201ENST00000341529 ANP32BQ92688 251 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms