RNA–Protein interactions for RNA: ENST00000340592.9

GRIA1-202, Transcript of glutamate ionotropic receptor AMPA type subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GRIA1, Length 3,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1-202ENST00000340592 PTPRKQ15262 1439 aa13.24□□□□□ -0.29
GRIA1-202ENST00000340592 ASXL2Q76L83 1435 aa13.24□□□□□ -0.29
GRIA1-202ENST00000340592 MIA2Q96PC5 1412 aa13.24□□□□□ -0.29
GRIA1-202ENST00000340592 NEUROD1Q13562 356 aa13.24□□□□□ -0.29
GRIA1-202ENST00000340592 KDM5BQ9UGL1 1544 aa13.22□□□□□ -0.29
GRIA1-202ENST00000340592 FAM69CQ0P6D2 419 aa13.22□□□□□ -0.29
GRIA1-202ENST00000340592 PTPN23Q9H3S7 1636 aa13.22□□□□□ -0.29
GRIA1-202ENST00000340592 UHRF1BP1LA0JNW5 1464 aa13.22□□□□□ -0.29
GRIA1-202ENST00000340592 ARHGAP5Q13017 1502 aa13.21□□□□□ -0.29
GRIA1-202ENST00000340592 AFAP1Q8N556 730 aa13.2□□□□□ -0.3
GRIA1-202ENST00000340592 ADCY10Q96PN6 1610 aa13.2□□□□□ -0.3
GRIA1-202ENST00000340592 WDR7Q9Y4E6 1490 aa13.19□□□□□ -0.3
GRIA1-202ENST00000340592 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.19□□□□□ -0.3
GRIA1-202ENST00000340592 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.19□□□□□ -0.3
GRIA1-202ENST00000340592 CAMSAP2Q08AD1 1489 aa13.19□□□□□ -0.3
GRIA1-202ENST00000340592 ZCCHC11Q5TAX3 1644 aaKnown RBP13.18□□□□□ -0.3
GRIA1-202ENST00000340592 NCBP3Q53F19 620 aaKnown RBP13.18□□□□□ -0.3
GRIA1-202ENST00000340592 ABCC5O15440 1437 aa13.17□□□□□ -0.3
GRIA1-202ENST00000340592 ABCC10Q5T3U5 1492 aa13.17□□□□□ -0.3
GRIA1-202ENST00000340592 DAPK1P53355 1430 aa13.17□□□□□ -0.3
GRIA1-202ENST00000340592 PLEKHG5O94827 1062 aa13.17□□□□□ -0.3
GRIA1-202ENST00000340592 TRHP20396 242 aaPredicted RBP13.16□□□□□ -0.3
GRIA1-202ENST00000340592 DHX57Q6P158 1386 aaKnown RBP13.15□□□□□ -0.3
GRIA1-202ENST00000340592 FOXD1Q16676 465 aa13.15□□□□□ -0.3
GRIA1-202ENST00000340592 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.15□□□□□ -0.3
GRIA1-202ENST00000340592 SIN3AQ96ST3 1273 aa13.15□□□□□ -0.3
GRIA1-202ENST00000340592 RIMBP3CA6NJZ7 1639 aa13.14□□□□□ -0.31
GRIA1-202ENST00000340592 RIMBP3BA6NNM3 1639 aa13.14□□□□□ -0.31
GRIA1-202ENST00000340592 RIMBP3Q9UFD9 1639 aa13.14□□□□□ -0.31
GRIA1-202ENST00000340592 ANKRD30AQ9BXX3 1397 aa13.14□□□□□ -0.31
GRIA1-202ENST00000340592 SLC4A1APQ9BWU0 796 aaKnown RBP13.14□□□□□ -0.31
GRIA1-202ENST00000340592 NAIPQ13075 1403 aa13.13□□□□□ -0.31
GRIA1-202ENST00000340592 CD109Q6YHK3 1445 aa13.13□□□□□ -0.31
GRIA1-202ENST00000340592 PLCH2O75038 1416 aa13.13□□□□□ -0.31
GRIA1-202ENST00000340592 TCOF1Q13428 1488 aaKnown RBP13.13□□□□□ -0.31
GRIA1-202ENST00000340592 TTC37Q6PGP7 1564 aa13.13□□□□□ -0.31
GRIA1-202ENST00000340592 SPAG9O60271 1321 aaKnown RBP13.13□□□□□ -0.31
GRIA1-202ENST00000340592 RSPH4AQ5TD94 716 aa13.12□□□□□ -0.31
GRIA1-202ENST00000340592 HFM1A2PYH4 1435 aa13.12□□□□□ -0.31
GRIA1-202ENST00000340592 RAPGEF3O95398 923 aa13.11□□□□□ -0.31
GRIA1-202ENST00000340592 C9orf84Q5VXU9 1444 aa13.11□□□□□ -0.31
GRIA1-202ENST00000340592 PLPPR3Q6T4P5 718 aa13.1□□□□□ -0.31
GRIA1-202ENST00000340592 FANCAO15360 1455 aa13.09□□□□□ -0.31
GRIA1-202ENST00000340592 SCAPERQ9BY12 1400 aa13.09□□□□□ -0.31
GRIA1-202ENST00000340592 KIF15Q9NS87 1388 aa13.09□□□□□ -0.31
GRIA1-202ENST00000340592 SYCP2Q9BX26 1530 aa13.08□□□□□ -0.32
GRIA1-202ENST00000340592 ITSN2Q9NZM3 1697 aa13.08□□□□□ -0.32
GRIA1-202ENST00000340592 MPHOSPH9Q99550 1183 aa13.08□□□□□ -0.32
GRIA1-202ENST00000340592 NCOA1Q15788 1441 aa13.08□□□□□ -0.32
GRIA1-202ENST00000340592 AKNAQ7Z591 1439 aa13.07□□□□□ -0.32
GRIA1-202ENST00000340592 TRAPPC8Q9Y2L5 1435 aa13.06□□□□□ -0.32
GRIA1-202ENST00000340592 CCDC141Q6ZP82 1450 aa13.06□□□□□ -0.32
GRIA1-202ENST00000340592 NUP155O75694 1391 aa13.06□□□□□ -0.32
GRIA1-202ENST00000340592 ANKRD50Q9ULJ7 1429 aa13.06□□□□□ -0.32
GRIA1-202ENST00000340592 CDC42BPAQ5VT25 1732 aa13.06□□□□□ -0.32
GRIA1-202ENST00000340592 ADGRL1O94910 1474 aa13.05□□□□□ -0.32
GRIA1-202ENST00000340592 MBD5Q9P267 1494 aa13.04□□□□□ -0.32
GRIA1-202ENST00000340592 ROCK1Q13464 1354 aa13.04□□□□□ -0.32
GRIA1-202ENST00000340592 KIF3BO15066 747 aa13.04□□□□□ -0.32
GRIA1-202ENST00000340592 PKD2Q13563 968 aa13.04□□□□□ -0.32
GRIA1-202ENST00000340592 PLEKHH2Q8IVE3 1493 aa13.03□□□□□ -0.32
GRIA1-202ENST00000340592 SAMD9LQ8IVG5 1584 aa13.03□□□□□ -0.32
GRIA1-202ENST00000340592 DNMT1P26358 1616 aaKnown RBP13.02□□□□□ -0.33
GRIA1-202ENST00000340592 GGT6Q6P531 493 aa13.02□□□□□ -0.33
GRIA1-202ENST00000340592 ARHGEF12Q9NZN5 1544 aa13.02□□□□□ -0.33
GRIA1-202ENST00000340592 PREX2Q70Z35 1606 aa13.01□□□□□ -0.33
GRIA1-202ENST00000340592 KIAA1107Q9UPP5 1409 aa13□□□□□ -0.33
GRIA1-202ENST00000340592 MYO5CQ9NQX4 1742 aa13□□□□□ -0.33
GRIA1-202ENST00000340592 CDC42BPBQ9Y5S2 1711 aa13□□□□□ -0.33
GRIA1-202ENST00000340592 CLSPNQ9HAW4 1339 aa13□□□□□ -0.33
GRIA1-202ENST00000340592 DNAJC5Q9H3Z4 198 aa13□□□□□ -0.33
GRIA1-202ENST00000340592 TONSLQ96HA7 1378 aa12.99□□□□□ -0.33
GRIA1-202ENST00000340592 ZNF326Q5BKZ1 582 aaKnown RBP12.99□□□□□ -0.33
GRIA1-202ENST00000340592 RTN4Q9NQC3 1192 aaKnown RBP12.98□□□□□ -0.33
GRIA1-202ENST00000340592 SCAF1Q9H7N4 1312 aaKnown RBP12.98□□□□□ -0.33
GRIA1-202ENST00000340592 MLECQ14165 292 aa12.97□□□□□ -0.33
GRIA1-202ENST00000340592 KDM6BO15054 1643 aa12.97□□□□□ -0.33
GRIA1-202ENST00000340592 ABCA9Q8IUA7 1624 aa12.94□□□□□ -0.34
GRIA1-202ENST00000340592 RGL3Q3MIN7 710 aa12.94□□□□□ -0.34
GRIA1-202ENST00000340592 ABCC1P33527 1531 aa12.93□□□□□ -0.34
GRIA1-202ENST00000340592 MAPKBP1O60336 1514 aa12.93□□□□□ -0.34
GRIA1-202ENST00000340592 DENND4BO75064 1496 aaPredicted RBP12.93□□□□□ -0.34
GRIA1-202ENST00000340592 SHANK2Q9UPX8 1470 aa12.93□□□□□ -0.34
GRIA1-202ENST00000340592 ARID4BQ4LE39 1312 aaPredicted RBP12.93□□□□□ -0.34
GRIA1-202ENST00000340592 ADGRL2O95490 1459 aa12.92□□□□□ -0.34
GRIA1-202ENST00000340592 KDM2AQ9Y2K7 1162 aa12.91□□□□□ -0.34
GRIA1-202ENST00000340592 ARHGEF5Q12774 1597 aa12.91□□□□□ -0.34
GRIA1-202ENST00000340592 HIRIP3Q9BW71 556 aaPredicted RBP12.91□□□□□ -0.34
GRIA1-202ENST00000340592 ZNF518AQ6AHZ1 1483 aa12.9□□□□□ -0.34
GRIA1-202ENST00000340592 TSPOAP1O95153 1857 aa12.9□□□□□ -0.34
GRIA1-202ENST00000340592 ACIN1Q9UKV3 1341 aaKnown RBP12.9□□□□□ -0.34
GRIA1-202ENST00000340592 CHGAP10645 457 aaKnown RBP12.89□□□□□ -0.35
GRIA1-202ENST00000340592 WASHC2CQ9Y4E1 1318 aa12.88□□□□□ -0.35
GRIA1-202ENST00000340592 L3MBTL2Q969R5 705 aa12.88□□□□□ -0.35
GRIA1-202ENST00000340592 KANK1Q14678 1352 aa12.88□□□□□ -0.35
GRIA1-202ENST00000340592 POGZQ7Z3K3 1410 aa12.87□□□□□ -0.35
GRIA1-202ENST00000340592 ARAP3Q8WWN8 1544 aa12.87□□□□□ -0.35
GRIA1-202ENST00000340592 DHX29Q7Z478 1369 aaKnown RBP12.87□□□□□ -0.35
GRIA1-202ENST00000340592 NEO1Q92859 1461 aa12.86□□□□□ -0.35
GRIA1-202ENST00000340592 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms