RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 PLEKHG5O94827 1062 aa9.76□□□□□ -0.85
ZNF28-201ENST00000339844 KLHL34Q8N239 644 aa9.76□□□□□ -0.85
ZNF28-201ENST00000339844 UHRF1BP1LA0JNW5 1464 aa9.76□□□□□ -0.85
ZNF28-201ENST00000339844 ABCC2Q92887 1545 aa9.76□□□□□ -0.85
ZNF28-201ENST00000339844 ARHGAP35Q9NRY4 1499 aa9.75□□□□□ -0.85
ZNF28-201ENST00000339844 MIER1Q8N108 512 aa9.75□□□□□ -0.85
ZNF28-201ENST00000339844 EFCAB5A4FU69 1503 aa9.75□□□□□ -0.85
ZNF28-201ENST00000339844 ABCA8O94911 1581 aa9.75□□□□□ -0.85
ZNF28-201ENST00000339844 SPDYE1Q8NFV5 336 aaPredicted RBP9.74□□□□□ -0.85
ZNF28-201ENST00000339844 NPM1P06748 294 aaKnown RBP eCLIP9.73□□□□□ -0.85
ZNF28-201ENST00000339844 CLEC11AQ9Y240 323 aa9.73□□□□□ -0.85
ZNF28-201ENST00000339844 KDM5BQ9UGL1 1544 aa9.72□□□□□ -0.85
ZNF28-201ENST00000339844 PELP1Q8IZL8 1130 aaKnown RBP9.72□□□□□ -0.85
ZNF28-201ENST00000339844 MAPKBP1O60336 1514 aa9.72□□□□□ -0.85
ZNF28-201ENST00000339844 ARID3CA6NKF2 412 aa9.71□□□□□ -0.86
ZNF28-201ENST00000339844 CLIP1P30622 1438 aa9.69□□□□□ -0.86
ZNF28-201ENST00000339844 ZCCHC11Q5TAX3 1644 aaKnown RBP9.69□□□□□ -0.86
ZNF28-201ENST00000339844 ASXL2Q76L83 1435 aa9.69□□□□□ -0.86
ZNF28-201ENST00000339844 IFNLR1Q8IU57 520 aaPredicted RBP9.69□□□□□ -0.86
ZNF28-201ENST00000339844 RAPGEF6Q8TEU7 1601 aa9.69□□□□□ -0.86
ZNF28-201ENST00000339844 ATP10BO94823 1461 aa9.68□□□□□ -0.86
ZNF28-201ENST00000339844 NUP153P49790 1475 aaKnown RBP9.68□□□□□ -0.86
ZNF28-201ENST00000339844 ABCC10Q5T3U5 1492 aa9.68□□□□□ -0.86
ZNF28-201ENST00000339844 REM2Q8IYK8 340 aaPredicted RBP9.68□□□□□ -0.86
ZNF28-201ENST00000339844 CEP162Q5TB80 1403 aa9.66□□□□□ -0.86
ZNF28-201ENST00000339844 FAM69CQ0P6D2 419 aa9.66□□□□□ -0.86
ZNF28-201ENST00000339844 DIP2BQ9P265 1576 aa9.66□□□□□ -0.86
ZNF28-201ENST00000339844 KIF13AQ9H1H9 1805 aa9.66□□□□□ -0.86
ZNF28-201ENST00000339844 FMN1Q68DA7 1419 aa9.65□□□□□ -0.86
ZNF28-201ENST00000339844 PRR29P0C7W0 189 aa9.65□□□□□ -0.86
ZNF28-201ENST00000339844 ZBTB47Q9UFB7 747 aaPredicted RBP9.65□□□□□ -0.86
ZNF28-201ENST00000339844 WDR7Q9Y4E6 1490 aa9.64□□□□□ -0.87
ZNF28-201ENST00000339844 EPRSP07814 1512 aaKnown RBP9.63□□□□□ -0.87
ZNF28-201ENST00000339844 SPOCK2Q92563 424 aa9.63□□□□□ -0.87
ZNF28-201ENST00000339844 CDK13Q14004 1512 aaKnown RBP9.62□□□□□ -0.87
ZNF28-201ENST00000339844 ATP1B4Q9UN42 357 aaPredicted RBP9.62□□□□□ -0.87
ZNF28-201ENST00000339844 PCF11O94913 1555 aaKnown RBP9.62□□□□□ -0.87
ZNF28-201ENST00000339844 KCNH8Q96L42 1107 aa9.61□□□□□ -0.87
ZNF28-201ENST00000339844 CASKIN1Q8WXD9 1431 aa9.61□□□□□ -0.87
ZNF28-201ENST00000339844 GLI2P10070 1586 aa9.61□□□□□ -0.87
ZNF28-201ENST00000339844 HECW1Q76N89 1606 aa9.6□□□□□ -0.87
ZNF28-201ENST00000339844 LRRIQ1Q96JM4 1722 aa9.59□□□□□ -0.87
ZNF28-201ENST00000339844 PLEKHD1A6NEE1 506 aa9.57□□□□□ -0.88
ZNF28-201ENST00000339844 FYCO1Q9BQS8 1478 aa9.57□□□□□ -0.88
ZNF28-201ENST00000339844 TSPOAP1O95153 1857 aa9.57□□□□□ -0.88
ZNF28-201ENST00000339844 MAP3K4Q9Y6R4 1608 aa9.56□□□□□ -0.88
ZNF28-201ENST00000339844 PPRC1Q5VV67 1664 aaKnown RBP9.56□□□□□ -0.88
ZNF28-201ENST00000339844 PITPNM1O00562 1244 aa9.56□□□□□ -0.88
ZNF28-201ENST00000339844 CD109Q6YHK3 1445 aa9.55□□□□□ -0.88
ZNF28-201ENST00000339844 MAGI3Q5TCQ9 1506 aa9.54□□□□□ -0.88
ZNF28-201ENST00000339844 VPS8Q8N3P4 1428 aa9.54□□□□□ -0.88
ZNF28-201ENST00000339844 CCDC18Q5T9S5 1454 aa9.53□□□□□ -0.88
ZNF28-201ENST00000339844 ABCA9Q8IUA7 1624 aa9.53□□□□□ -0.88
ZNF28-201ENST00000339844 TROQ12816 1431 aaPredicted RBP9.53□□□□□ -0.88
ZNF28-201ENST00000339844 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.52□□□□□ -0.88
ZNF28-201ENST00000339844 CFAP43Q8NDM7 1665 aa9.52□□□□□ -0.89
ZNF28-201ENST00000339844 HAX1O00165 279 aa9.52□□□□□ -0.89
ZNF28-201ENST00000339844 CDK11AQ9UQ88 783 aaPredicted RBP9.52□□□□□ -0.89
ZNF28-201ENST00000339844 KIF14Q15058 1648 aa9.52□□□□□ -0.89
ZNF28-201ENST00000339844 TTC37Q6PGP7 1564 aa9.51□□□□□ -0.89
ZNF28-201ENST00000339844 COL17A1Q9UMD9 1497 aaPredicted RBP9.51□□□□□ -0.89
ZNF28-201ENST00000339844 CIZ1Q9ULV3 898 aaPredicted RBP9.5□□□□□ -0.89
ZNF28-201ENST00000339844 TEX14Q8IWB6 1497 aa9.5□□□□□ -0.89
ZNF28-201ENST00000339844 CCER1Q8TC90 406 aaPredicted RBP9.49□□□□□ -0.89
ZNF28-201ENST00000339844 PIP4P2Q8N4L2 257 aa9.48□□□□□ -0.89
ZNF28-201ENST00000339844 KDM6BO15054 1643 aa9.48□□□□□ -0.89
ZNF28-201ENST00000339844 CREBZFQ9NS37 354 aa9.47□□□□□ -0.89
ZNF28-201ENST00000339844 PLCH2O75038 1416 aa9.47□□□□□ -0.89
ZNF28-201ENST00000339844 TIAM1Q13009 1591 aa9.46□□□□□ -0.89
ZNF28-201ENST00000339844 MTUS2Q5JR59 1369 aa9.46□□□□□ -0.9
ZNF28-201ENST00000339844 ECM2O94769 699 aaPredicted RBP9.45□□□□□ -0.9
ZNF28-201ENST00000339844 KANK4Q5T7N3 995 aaPredicted RBP9.45□□□□□ -0.9
ZNF28-201ENST00000339844 FANCAO15360 1455 aa9.45□□□□□ -0.9
ZNF28-201ENST00000339844 NEO1Q92859 1461 aa9.45□□□□□ -0.9
ZNF28-201ENST00000339844 EHBP1L1Q8N3D4 1523 aa9.44□□□□□ -0.9
ZNF28-201ENST00000339844 ARAP3Q8WWN8 1544 aa9.43□□□□□ -0.9
ZNF28-201ENST00000339844 AKNAQ7Z591 1439 aa9.43□□□□□ -0.9
ZNF28-201ENST00000339844 CENPBP07199 599 aaPredicted RBP9.43□□□□□ -0.9
ZNF28-201ENST00000339844 PKD2Q13563 968 aa9.43□□□□□ -0.9
ZNF28-201ENST00000339844 MYO5CQ9NQX4 1742 aa9.42□□□□□ -0.9
ZNF28-201ENST00000339844 MAP3K1Q13233 1512 aa9.42□□□□□ -0.9
ZNF28-201ENST00000339844 GPATCH8Q9UKJ3 1502 aaKnown RBP9.42□□□□□ -0.9
ZNF28-201ENST00000339844 LRRC9Q6ZRR7 1453 aa9.42□□□□□ -0.9
ZNF28-201ENST00000339844 PHLDB1Q86UU1 1377 aa9.42□□□□□ -0.9
ZNF28-201ENST00000339844 ACIN1Q9UKV3 1341 aaKnown RBP9.42□□□□□ -0.9
ZNF28-201ENST00000339844 RAPGEF3O95398 923 aa9.42□□□□□ -0.9
ZNF28-201ENST00000339844 ARHGAP5Q13017 1502 aa9.41□□□□□ -0.9
ZNF28-201ENST00000339844 GSE1Q14687 1217 aa9.41□□□□□ -0.9
ZNF28-201ENST00000339844 DCAF8Q5TAQ9 597 aa9.41□□□□□ -0.9
ZNF28-201ENST00000339844 EFCAB2Q5VUJ9 269 aa9.41□□□□□ -0.9
ZNF28-201ENST00000339844 CDC42BPAQ5VT25 1732 aa9.41□□□□□ -0.9
ZNF28-201ENST00000339844 CDC42BPBQ9Y5S2 1711 aa9.41□□□□□ -0.9
ZNF28-201ENST00000339844 PREX2Q70Z35 1606 aa9.41□□□□□ -0.9
ZNF28-201ENST00000339844 NCOA2Q15596 1464 aa9.4□□□□□ -0.9
ZNF28-201ENST00000339844 CCNB3Q8WWL7 1395 aa9.4□□□□□ -0.9
ZNF28-201ENST00000339844 DIEXFQ68CQ4 756 aaKnown RBP9.4□□□□□ -0.9
ZNF28-201ENST00000339844 FRMPD1Q5SYB0 1578 aa9.4□□□□□ -0.9
ZNF28-201ENST00000339844 ADGRL1O94910 1474 aa9.4□□□□□ -0.91
ZNF28-201ENST00000339844 SCAPERQ9BY12 1400 aa9.39□□□□□ -0.91
ZNF28-201ENST00000339844 CFAP74Q9C0B2 1584 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms