RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 KCNH8Q96L42 1107 aa10.79□□□□□ -0.68
SRFBP1-201ENST00000339397 UACAQ9BZF9 1416 aa10.78□□□□□ -0.68
SRFBP1-201ENST00000339397 DAPK1P53355 1430 aa10.78□□□□□ -0.68
SRFBP1-201ENST00000339397 SHROOM2Q13796 1616 aa10.78□□□□□ -0.68
SRFBP1-201ENST00000339397 HNRNPMP52272 730 aaKnown RBP eCLIP10.76□□□□□ -0.697e-7■■■■□ 20.7
SRFBP1-201ENST00000339397 CLASP1Q7Z460 1538 aa10.75□□□□□ -0.69
SRFBP1-201ENST00000339397 CAMSAP2Q08AD1 1489 aa10.75□□□□□ -0.69
SRFBP1-201ENST00000339397 ABCC10Q5T3U5 1492 aa10.75□□□□□ -0.69
SRFBP1-201ENST00000339397 DENND4BO75064 1496 aaPredicted RBP10.74□□□□□ -0.69
SRFBP1-201ENST00000339397 HIRIP3Q9BW71 556 aaPredicted RBP10.74□□□□□ -0.69
SRFBP1-201ENST00000339397 MPHOSPH9Q99550 1183 aa10.73□□□□□ -0.69
SRFBP1-201ENST00000339397 MIER1Q8N108 512 aa10.71□□□□□ -0.69
SRFBP1-201ENST00000339397 AKNAQ7Z591 1439 aa10.71□□□□□ -0.69
SRFBP1-201ENST00000339397 DNMT1P26358 1616 aaKnown RBP10.71□□□□□ -0.69
SRFBP1-201ENST00000339397 ADCY10Q96PN6 1610 aa10.71□□□□□ -0.7
SRFBP1-201ENST00000339397 PPP1R15AO75807 674 aaPredicted RBP10.71□□□□□ -0.7
SRFBP1-201ENST00000339397 NCOA1Q15788 1441 aa10.71□□□□□ -0.7
SRFBP1-201ENST00000339397 CDC42BPAQ5VT25 1732 aa10.71□□□□□ -0.7
SRFBP1-201ENST00000339397 ABCC2Q92887 1545 aa10.7□□□□□ -0.7
SRFBP1-201ENST00000339397 OSCARQ8IYS5 282 aa10.69□□□□□ -0.7
SRFBP1-201ENST00000339397 ROCK1Q13464 1354 aa10.69□□□□□ -0.7
SRFBP1-201ENST00000339397 PLPPR3Q6T4P5 718 aa10.68□□□□□ -0.7
SRFBP1-201ENST00000339397 SLC4A1APQ9BWU0 796 aaKnown RBP10.68□□□□□ -0.7
SRFBP1-201ENST00000339397 GCC2Q8IWJ2 1684 aa10.67□□□□□ -0.7
SRFBP1-201ENST00000339397 TSPY4P0CV99 314 aa10.67□□□□□ -0.7
SRFBP1-201ENST00000339397 TSPY10P0CW01 314 aa10.67□□□□□ -0.7
SRFBP1-201ENST00000339397 ITSN2Q9NZM3 1697 aa10.66□□□□□ -0.7
SRFBP1-201ENST00000339397 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.66□□□□□ -0.7
SRFBP1-201ENST00000339397 TONSLQ96HA7 1378 aa10.66□□□□□ -0.7
SRFBP1-201ENST00000339397 TTC37Q6PGP7 1564 aa10.66□□□□□ -0.7
SRFBP1-201ENST00000339397 MBD5Q9P267 1494 aa10.66□□□□□ -0.7
SRFBP1-201ENST00000339397 CDC42BPBQ9Y5S2 1711 aa10.65□□□□□ -0.7
SRFBP1-201ENST00000339397 C9orf84Q5VXU9 1444 aa10.64□□□□□ -0.71
SRFBP1-201ENST00000339397 ANKRD30AQ9BXX3 1397 aa10.64□□□□□ -0.71
SRFBP1-201ENST00000339397 KDM5BQ9UGL1 1544 aa10.63□□□□□ -0.71
SRFBP1-201ENST00000339397 SAMD9LQ8IVG5 1584 aa10.63□□□□□ -0.71
SRFBP1-201ENST00000339397 ZCCHC11Q5TAX3 1644 aaKnown RBP10.63□□□□□ -0.71
SRFBP1-201ENST00000339397 TIMELESSQ9UNS1 1208 aa10.63□□□□□ -0.71
SRFBP1-201ENST00000339397 ANKRD50Q9ULJ7 1429 aa10.63□□□□□ -0.71
SRFBP1-201ENST00000339397 L3MBTL2Q969R5 705 aa10.63□□□□□ -0.71
SRFBP1-201ENST00000339397 ARHGAP5Q13017 1502 aa10.62□□□□□ -0.71
SRFBP1-201ENST00000339397 ANKRD30BQ9BXX2 1392 aa10.62□□□□□ -0.71
SRFBP1-201ENST00000339397 PKD2Q13563 968 aa10.62□□□□□ -0.71
SRFBP1-201ENST00000339397 UHRF1BP1LA0JNW5 1464 aa10.61□□□□□ -0.71
SRFBP1-201ENST00000339397 ADGRL2O95490 1459 aa10.61□□□□□ -0.71
SRFBP1-201ENST00000339397 KIF15Q9NS87 1388 aa10.61□□□□□ -0.71
SRFBP1-201ENST00000339397 YTHDC1Q96MU7 727 aaKnown RBP10.61□□□□□ -0.71
SRFBP1-201ENST00000339397 ARHGEF12Q9NZN5 1544 aa10.61□□□□□ -0.71
SRFBP1-201ENST00000339397 PZPP20742 1482 aa10.61□□□□□ -0.71
SRFBP1-201ENST00000339397 SYCP2Q9BX26 1530 aa10.6□□□□□ -0.71
SRFBP1-201ENST00000339397 AFAP1Q8N556 730 aa10.6□□□□□ -0.71
SRFBP1-201ENST00000339397 NUP155O75694 1391 aa10.6□□□□□ -0.71
SRFBP1-201ENST00000339397 PREX2Q70Z35 1606 aa10.6□□□□□ -0.71
SRFBP1-201ENST00000339397 CROCC2H7BZ55 1655 aa10.59□□□□□ -0.71
SRFBP1-201ENST00000339397 DDX10Q13206 875 aaKnown RBP10.59□□□□□ -0.71
SRFBP1-201ENST00000339397 PLCH2O75038 1416 aa10.58□□□□□ -0.72
SRFBP1-201ENST00000339397 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.58□□□□□ -0.72
SRFBP1-201ENST00000339397 EFCAB2Q5VUJ9 269 aa10.58□□□□□ -0.72
SRFBP1-201ENST00000339397 CCDC141Q6ZP82 1450 aa10.57□□□□□ -0.72
SRFBP1-201ENST00000339397 NBPF8Q3BBV2 869 aa10.57□□□□□ -0.72
SRFBP1-201ENST00000339397 TRAPPC8Q9Y2L5 1435 aa10.57□□□□□ -0.72
SRFBP1-201ENST00000339397 ADGBQ8N7X0 1667 aa10.57□□□□□ -0.72
SRFBP1-201ENST00000339397 SHANK2Q9UPX8 1470 aa10.56□□□□□ -0.72
SRFBP1-201ENST00000339397 RSPH4AQ5TD94 716 aa10.55□□□□□ -0.72
SRFBP1-201ENST00000339397 ARHGEF5Q12774 1597 aa10.55□□□□□ -0.72
SRFBP1-201ENST00000339397 ASXL2Q76L83 1435 aa10.55□□□□□ -0.72
SRFBP1-201ENST00000339397 WDR7Q9Y4E6 1490 aa10.55□□□□□ -0.72
SRFBP1-201ENST00000339397 MYO5CQ9NQX4 1742 aa10.54□□□□□ -0.72
SRFBP1-201ENST00000339397 CYB5RLQ6IPT4 315 aa10.54□□□□□ -0.72
SRFBP1-201ENST00000339397 RPRD2Q5VT52 1461 aaKnown RBP10.53□□□□□ -0.72
SRFBP1-201ENST00000339397 PLEKHH2Q8IVE3 1493 aa10.53□□□□□ -0.72
SRFBP1-201ENST00000339397 ZNF326Q5BKZ1 582 aaKnown RBP10.53□□□□□ -0.72
SRFBP1-201ENST00000339397 KIAA1107Q9UPP5 1409 aa10.53□□□□□ -0.72
SRFBP1-201ENST00000339397 NPM1P06748 294 aaKnown RBP eCLIP10.52□□□□□ -0.72
SRFBP1-201ENST00000339397 HSPA5P11021 654 aaKnown RBP10.51□□□□□ -0.73
SRFBP1-201ENST00000339397 MYT1LQ9UL68 1186 aa10.5□□□□□ -0.73
SRFBP1-201ENST00000339397 TEX14Q8IWB6 1497 aa10.5□□□□□ -0.73
SRFBP1-201ENST00000339397 SPAG9O60271 1321 aaKnown RBP10.5□□□□□ -0.73
SRFBP1-201ENST00000339397 C11orf95C9JLR9 678 aaPredicted RBP10.5□□□□□ -0.73
SRFBP1-201ENST00000339397 KDM2AQ9Y2K7 1162 aa10.5□□□□□ -0.73
SRFBP1-201ENST00000339397 FANCAO15360 1455 aa10.49□□□□□ -0.73
SRFBP1-201ENST00000339397 ABCC1P33527 1531 aa10.49□□□□□ -0.73
SRFBP1-201ENST00000339397 RGL3Q3MIN7 710 aa10.48□□□□□ -0.73
SRFBP1-201ENST00000339397 ACIN1Q9UKV3 1341 aaKnown RBP10.48□□□□□ -0.73
SRFBP1-201ENST00000339397 SCAPERQ9BY12 1400 aa10.48□□□□□ -0.73
SRFBP1-201ENST00000339397 SCAF1Q9H7N4 1312 aaKnown RBP10.47□□□□□ -0.73
SRFBP1-201ENST00000339397 FAM135AQ9P2D6 1515 aa10.47□□□□□ -0.73
SRFBP1-201ENST00000339397 EIF4G2P78344 907 aaKnown RBP eCLIP10.46□□□□□ -0.73
SRFBP1-201ENST00000339397 WASHC2AQ641Q2 1341 aa10.46□□□□□ -0.74
SRFBP1-201ENST00000339397 DCAF11Q8TEB1 546 aa10.46□□□□□ -0.74
SRFBP1-201ENST00000339397 MAST1Q9Y2H9 1570 aa10.45□□□□□ -0.74
SRFBP1-201ENST00000339397 ADGRL1O94910 1474 aa10.45□□□□□ -0.74
SRFBP1-201ENST00000339397 PLA2R1Q13018 1463 aa10.45□□□□□ -0.74
SRFBP1-201ENST00000339397 ABCA9Q8IUA7 1624 aa10.45□□□□□ -0.74
SRFBP1-201ENST00000339397 KDM5DQ9BY66 1539 aa10.44□□□□□ -0.74
SRFBP1-201ENST00000339397 CD109Q6YHK3 1445 aa10.44□□□□□ -0.74
SRFBP1-201ENST00000339397 KIF3BO15066 747 aa10.44□□□□□ -0.74
SRFBP1-201ENST00000339397 RAPGEF3O95398 923 aa10.44□□□□□ -0.74
SRFBP1-201ENST00000339397 DUOX2Q9NRD8 1548 aa10.42□□□□□ -0.74
SRFBP1-201ENST00000339397 PLXNC1O60486 1568 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms