RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 RBM19Q9Y4C8 960 aaKnown RBP4.3□□□□□ -1.72
SOCS4-201ENST00000339298 PABPN1Q86U42 306 aaKnown RBP eCLIP4.3□□□□□ -1.72
SOCS4-201ENST00000339298 ZMYND15Q9H091 742 aa4.3□□□□□ -1.72
SOCS4-201ENST00000339298 CCDC82Q8N4S0 544 aa4.3□□□□□ -1.72
SOCS4-201ENST00000339298 PYGBP11216 843 aa4.29□□□□□ -1.72
SOCS4-201ENST00000339298 PAF1Q8N7H5 531 aa4.29□□□□□ -1.72
SOCS4-201ENST00000339298 FAM212AQ96EL1 285 aa4.29□□□□□ -1.72
SOCS4-201ENST00000339298 MSH5O43196 834 aa4.29□□□□□ -1.72
SOCS4-201ENST00000339298 CALR3Q96L12 384 aaKnown RBP4.29□□□□□ -1.72
SOCS4-201ENST00000339298 CSB-PGBD3P0DP91 1061 aa4.29□□□□□ -1.72
SOCS4-201ENST00000339298 ESF1Q9H501 851 aaKnown RBP4.29□□□□□ -1.72
SOCS4-201ENST00000339298 NPM1P06748 294 aaKnown RBP eCLIP4.29□□□□□ -1.72
SOCS4-201ENST00000339298 MAP10Q9P2G4 905 aa4.29□□□□□ -1.72
SOCS4-201ENST00000339298 MTMR7Q9Y216 660 aa4.28□□□□□ -1.72
SOCS4-201ENST00000339298 FAM9BQ8IZU0 186 aa4.28□□□□□ -1.72
SOCS4-201ENST00000339298 CANXP27824 592 aaKnown RBP4.28□□□□□ -1.72
SOCS4-201ENST00000339298 ZNF428Q96B54 188 aa4.28□□□□□ -1.72
SOCS4-201ENST00000339298 POLR3EQ9NVU0 708 aa4.28□□□□□ -1.72
SOCS4-201ENST00000339298 NUTM2BA6NNL0 878 aaPredicted RBP4.28□□□□□ -1.72
SOCS4-201ENST00000339298 NUTM2EB1AL46 878 aaPredicted RBP4.28□□□□□ -1.72
SOCS4-201ENST00000339298 NUTM2DQ5VT03 806 aaPredicted RBP4.28□□□□□ -1.72
SOCS4-201ENST00000339298 NUTM2AQ8IVF1 878 aaPredicted RBP4.28□□□□□ -1.72
SOCS4-201ENST00000339298 PSME1Q06323 249 aa4.27□□□□□ -1.73
SOCS4-201ENST00000339298 PCMTD1Q96MG8 357 aaPredicted RBP4.27□□□□□ -1.73
SOCS4-201ENST00000339298 GPIHBP1Q8IV16 184 aa4.27□□□□□ -1.73
SOCS4-201ENST00000339298 PTMAP06454 111 aaKnown RBP4.27□□□□□ -1.73
SOCS4-201ENST00000339298 TRIM63Q969Q1 353 aa4.27□□□□□ -1.73
SOCS4-201ENST00000339298 PRDM10Q9NQV6 1147 aa4.27□□□□□ -1.73
SOCS4-201ENST00000339298 MYO15BQ96JP2 1530 aa4.27□□□□□ -1.73
SOCS4-201ENST00000339298 RYDENQ9NUL5 291 aaKnown RBP4.27□□□□□ -1.73
SOCS4-201ENST00000339298 TNNT3P45378 269 aaPredicted RBP4.26□□□□□ -1.73
SOCS4-201ENST00000339298 PRM3Q9NNZ6 103 aa4.26□□□□□ -1.73
SOCS4-201ENST00000339298 RNF216Q9NWF9 866 aaPredicted RBP4.26□□□□□ -1.73
SOCS4-201ENST00000339298 AK7Q96M32 723 aa4.26□□□□□ -1.73
SOCS4-201ENST00000339298 ANP32CO43423 234 aa4.26□□□□□ -1.73
SOCS4-201ENST00000339298 UPF1Q92900 1129 aaKnown RBP eCLIP4.26□□□□□ -1.73
SOCS4-201ENST00000339298 ABL1P00519 1130 aa4.26□□□□□ -1.73
SOCS4-201ENST00000339298 PLCD4Q9BRC7 762 aa4.25□□□□□ -1.73
SOCS4-201ENST00000339298 CLUAP1Q96AJ1 413 aa4.25□□□□□ -1.73
SOCS4-201ENST00000339298 ATF5Q9Y2D1 282 aaPredicted RBP4.25□□□□□ -1.73
SOCS4-201ENST00000339298 PKD2Q13563 968 aa4.25□□□□□ -1.73
SOCS4-201ENST00000339298 NPHP1O15259 732 aa4.25□□□□□ -1.73
SOCS4-201ENST00000339298 DNTTIP2Q5QJE6 756 aaKnown RBP4.25□□□□□ -1.73
SOCS4-201ENST00000339298 ZNF592Q92610 1267 aa4.25□□□□□ -1.73
SOCS4-201ENST00000339298 TTC16Q8NEE8 873 aa4.24□□□□□ -1.73
SOCS4-201ENST00000339298 CCAR1Q8IX12 1150 aaKnown RBP4.24□□□□□ -1.73
SOCS4-201ENST00000339298 PCGF6Q9BYE7 350 aa4.24□□□□□ -1.73
SOCS4-201ENST00000339298 FAM50AQ14320 339 aaKnown RBP4.24□□□□□ -1.73
SOCS4-201ENST00000339298 WDR78Q5VTH9 848 aa4.24□□□□□ -1.73
SOCS4-201ENST00000339298 ZNF330Q9Y3S2 320 aaPredicted RBP4.24□□□□□ -1.73
SOCS4-201ENST00000339298 MFAP1P55081 439 aaKnown RBP4.23□□□□□ -1.73
SOCS4-201ENST00000339298 LARP6Q9BRS8 491 aaKnown RBP4.23□□□□□ -1.73
SOCS4-201ENST00000339298 ATXN8OSP0DMR3 200 aa4.23□□□□□ -1.73
SOCS4-201ENST00000339298 PMFBP1Q8TBY8 1022 aa4.23□□□□□ -1.73
SOCS4-201ENST00000339298 ANP32AP39687 249 aaKnown RBP4.23□□□□□ -1.73
SOCS4-201ENST00000339298 CWC22Q9HCG8 908 aaKnown RBP4.23□□□□□ -1.73
SOCS4-201ENST00000339298 SEMA3EO15041 775 aa4.22□□□□□ -1.73
SOCS4-201ENST00000339298 BRPF1P55201 1214 aaPredicted RBP4.22□□□□□ -1.73
SOCS4-201ENST00000339298 ENOX2Q16206 610 aaKnown RBP4.22□□□□□ -1.73
SOCS4-201ENST00000339298 RAB15P59190 212 aa4.22□□□□□ -1.73
SOCS4-201ENST00000339298 PAK3O75914 559 aaPredicted RBP4.21□□□□□ -1.74
SOCS4-201ENST00000339298 CLSTN1O94985 981 aa4.21□□□□□ -1.74
SOCS4-201ENST00000339298 R3HCC1Q9Y3T6 440 aaKnown RBP4.21□□□□□ -1.74
SOCS4-201ENST00000339298 HSP90AA1P07900 732 aaKnown RBP4.21□□□□□ -1.74
SOCS4-201ENST00000339298 ZBBXA8MT70 800 aa4.2□□□□□ -1.74
SOCS4-201ENST00000339298 SLC4A2P04920 1241 aa4.2□□□□□ -1.74
SOCS4-201ENST00000339298 GSE1Q14687 1217 aa4.2□□□□□ -1.74
SOCS4-201ENST00000339298 ANP32BQ92688 251 aaKnown RBP4.2□□□□□ -1.74
SOCS4-201ENST00000339298 IBSPP21815 317 aaPredicted RBP4.2□□□□□ -1.74
SOCS4-201ENST00000339298 DCAF1Q9Y4B6 1507 aa4.2□□□□□ -1.74
SOCS4-201ENST00000339298 CCDC27Q2M243 656 aa4.2□□□□□ -1.74
SOCS4-201ENST00000339298 HSP90AA2PQ14568 343 aaPredicted RBP4.19□□□□□ -1.74
SOCS4-201ENST00000339298 MRS2Q9HD23 443 aa4.19□□□□□ -1.74
SOCS4-201ENST00000339298 NEFHP12036 1026 aa4.19□□□□□ -1.74
SOCS4-201ENST00000339298 PRPF38AQ8NAV1 312 aaKnown RBP4.19□□□□□ -1.74
SOCS4-201ENST00000339298 SOX12O15370 315 aa4.19□□□□□ -1.74
SOCS4-201ENST00000339298 WDR75Q8IWA0 830 aaKnown RBP4.19□□□□□ -1.74
SOCS4-201ENST00000339298 RBM33Q96EV2 1170 aaKnown RBP4.19□□□□□ -1.74
SOCS4-201ENST00000339298 LGR5O75473 907 aa4.18□□□□□ -1.74
SOCS4-201ENST00000339298 ERICH6BQ5W0A0 696 aa4.18□□□□□ -1.74
SOCS4-201ENST00000339298 RIOK3O14730 519 aaKnown RBP4.18□□□□□ -1.74
SOCS4-201ENST00000339298 OSCARQ8IYS5 282 aa4.18□□□□□ -1.74
SOCS4-201ENST00000339298 PRR29P0C7W0 189 aa4.17□□□□□ -1.74
SOCS4-201ENST00000339298 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.17□□□□□ -1.74
SOCS4-201ENST00000339298 RBM10P98175 930 aaKnown RBP4.17□□□□□ -1.74
SOCS4-201ENST00000339298 CT47A1Q5JQC4 288 aaPredicted RBP4.17□□□□□ -1.74
SOCS4-201ENST00000339298 ZFP91Q96JP5 570 aaPredicted RBP4.17□□□□□ -1.74
SOCS4-201ENST00000339298 CNPY4Q8N129 248 aa4.17□□□□□ -1.74
SOCS4-201ENST00000339298 GOLGA6L1Q8N7Z2 621 aa4.17□□□□□ -1.74
SOCS4-201ENST00000339298 VTI1AQ96AJ9 217 aa4.17□□□□□ -1.74
SOCS4-201ENST00000339298 SALL2Q9Y467 1007 aaPredicted RBP4.17□□□□□ -1.74
SOCS4-201ENST00000339298 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.17□□□□□ -1.74
SOCS4-201ENST00000339298 CARNS1A5YM72 827 aa4.17□□□□□ -1.74
SOCS4-201ENST00000339298 TCERG1O14776 1098 aaKnown RBP4.17□□□□□ -1.74
SOCS4-201ENST00000339298 ANAPC15P60006 121 aa4.16□□□□□ -1.74
SOCS4-201ENST00000339298 RBM26Q5T8P6 1007 aaKnown RBP4.16□□□□□ -1.74
SOCS4-201ENST00000339298 CABP2Q9NPB3 220 aa4.16□□□□□ -1.74
SOCS4-201ENST00000339298 GTF2F1P35269 517 aaKnown RBP eCLIP4.16□□□□□ -1.74
SOCS4-201ENST00000339298 AGERQ15109 404 aa4.16□□□□□ -1.74
SOCS4-201ENST00000339298 TSNAXIP1Q2TAA8 658 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms