RNA–Protein interactions for RNA: ENST00000339140.4

FOXR2-201, Transcript of forkhead box R2, humanhuman

APPRIS P1 BASIC

Gene FOXR2, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2-201ENST00000339140 KDM5BQ9UGL1 1544 aa12.36□□□□□ -0.43
FOXR2-201ENST00000339140 EIF4G2P78344 907 aaKnown RBP eCLIP12.35□□□□□ -0.43
FOXR2-201ENST00000339140 WASHC2AQ641Q2 1341 aa12.35□□□□□ -0.43
FOXR2-201ENST00000339140 CARMIL2Q6F5E8 1435 aa12.34□□□□□ -0.43
FOXR2-201ENST00000339140 ATP1B4Q9UN42 357 aaPredicted RBP12.34□□□□□ -0.43
FOXR2-201ENST00000339140 NAIPQ13075 1403 aa12.34□□□□□ -0.43
FOXR2-201ENST00000339140 HSPA5P11021 654 aaKnown RBP12.33□□□□□ -0.44
FOXR2-201ENST00000339140 MTUS2Q5JR59 1369 aa12.32□□□□□ -0.44
FOXR2-201ENST00000339140 HECW1Q76N89 1606 aa12.32□□□□□ -0.44
FOXR2-201ENST00000339140 MYOM3Q5VTT5 1437 aa12.3□□□□□ -0.44
FOXR2-201ENST00000339140 PRKRIP1Q9H875 184 aaPredicted RBP12.3□□□□□ -0.44
FOXR2-201ENST00000339140 LRRIQ1Q96JM4 1722 aa12.3□□□□□ -0.44
FOXR2-201ENST00000339140 PRG4Q92954 1404 aaPredicted RBP12.3□□□□□ -0.44
FOXR2-201ENST00000339140 ANP32AP39687 249 aaKnown RBP12.29□□□□□ -0.44
FOXR2-201ENST00000339140 B4GALNT3Q6L9W6 998 aa12.29□□□□□ -0.44
FOXR2-201ENST00000339140 SUPT6HQ7KZ85 1726 aaKnown RBP12.29□□□□□ -0.44
FOXR2-201ENST00000339140 PTPRKQ15262 1439 aa12.29□□□□□ -0.44
FOXR2-201ENST00000339140 NCOA1Q15788 1441 aa12.29□□□□□ -0.44
FOXR2-201ENST00000339140 POLR1AO95602 1720 aaPredicted RBP12.29□□□□□ -0.44
FOXR2-201ENST00000339140 GCC2Q8IWJ2 1684 aa12.29□□□□□ -0.44
FOXR2-201ENST00000339140 AKNAQ7Z591 1439 aa12.29□□□□□ -0.44
FOXR2-201ENST00000339140 MRS2Q9HD23 443 aa12.28□□□□□ -0.44
FOXR2-201ENST00000339140 RTL5Q5HYW3 569 aaPredicted RBP12.27□□□□□ -0.44
FOXR2-201ENST00000339140 EHBP1L1Q8N3D4 1523 aa12.27□□□□□ -0.45
FOXR2-201ENST00000339140 CCDC7Q96M83 1385 aa12.27□□□□□ -0.45
FOXR2-201ENST00000339140 RAPGEF6Q8TEU7 1601 aa12.27□□□□□ -0.45
FOXR2-201ENST00000339140 SMG6Q86US8 1419 aaKnown RBP12.27□□□□□ -0.45
FOXR2-201ENST00000339140 OSCARQ8IYS5 282 aa12.25□□□□□ -0.45
FOXR2-201ENST00000339140 FAM9BQ8IZU0 186 aa12.25□□□□□ -0.45
FOXR2-201ENST00000339140 IPO9Q96P70 1041 aaKnown RBP12.25□□□□□ -0.45
FOXR2-201ENST00000339140 ABCA8O94911 1581 aa12.24□□□□□ -0.45
FOXR2-201ENST00000339140 ERCC6L2Q5T890 1561 aa12.24□□□□□ -0.45
FOXR2-201ENST00000339140 NBR1Q14596 966 aa12.23□□□□□ -0.45
FOXR2-201ENST00000339140 ZBTB47Q9UFB7 747 aaPredicted RBP12.23□□□□□ -0.45
FOXR2-201ENST00000339140 RNF123Q5XPI4 1314 aa12.22□□□□□ -0.45
FOXR2-201ENST00000339140 TCOF1Q13428 1488 aaKnown RBP12.22□□□□□ -0.45
FOXR2-201ENST00000339140 EPRSP07814 1512 aaKnown RBP12.22□□□□□ -0.45
FOXR2-201ENST00000339140 PTPRGP23470 1445 aa12.22□□□□□ -0.45
FOXR2-201ENST00000339140 CCDC184Q52MB2 194 aa12.21□□□□□ -0.45
FOXR2-201ENST00000339140 CCDC136Q96JN2 1154 aa12.21□□□□□ -0.45
FOXR2-201ENST00000339140 NUDCQ9Y266 331 aa12.21□□□□□ -0.46
FOXR2-201ENST00000339140 NUP153P49790 1475 aaKnown RBP12.21□□□□□ -0.46
FOXR2-201ENST00000339140 PLB1Q6P1J6 1458 aa12.21□□□□□ -0.46
FOXR2-201ENST00000339140 ARHGEF11O15085 1522 aa12.2□□□□□ -0.46
FOXR2-201ENST00000339140 PAK3O75914 559 aaPredicted RBP12.2□□□□□ -0.46
FOXR2-201ENST00000339140 PRKCSHP14314 528 aaPredicted RBP12.19□□□□□ -0.46
FOXR2-201ENST00000339140 DENND4BO75064 1496 aaPredicted RBP12.18□□□□□ -0.46
FOXR2-201ENST00000339140 PHF23Q9BUL5 403 aaPredicted RBP12.17□□□□□ -0.46
FOXR2-201ENST00000339140 USP35Q9P2H5 1018 aa12.17□□□□□ -0.46
FOXR2-201ENST00000339140 CDK13Q14004 1512 aaKnown RBP12.17□□□□□ -0.46
FOXR2-201ENST00000339140 L3MBTL2Q969R5 705 aa12.17□□□□□ -0.46
FOXR2-201ENST00000339140 RPRD2Q5VT52 1461 aaKnown RBP12.17□□□□□ -0.46
FOXR2-201ENST00000339140 SPATA31E1Q6ZUB1 1445 aa12.16□□□□□ -0.46
FOXR2-201ENST00000339140 MIA2Q96PC5 1412 aa12.16□□□□□ -0.46
FOXR2-201ENST00000339140 MPHOSPH9Q99550 1183 aa12.16□□□□□ -0.46
FOXR2-201ENST00000339140 MAGI3Q5TCQ9 1506 aa12.15□□□□□ -0.46
FOXR2-201ENST00000339140 KIF7Q2M1P5 1343 aa12.15□□□□□ -0.46
FOXR2-201ENST00000339140 C11orf95C9JLR9 678 aaPredicted RBP12.15□□□□□ -0.46
FOXR2-201ENST00000339140 ARID4BQ4LE39 1312 aaPredicted RBP12.14□□□□□ -0.47
FOXR2-201ENST00000339140 RRP7BPQ9NSQ0 103 aa12.14□□□□□ -0.47
FOXR2-201ENST00000339140 ABCC2Q92887 1545 aa12.14□□□□□ -0.47
FOXR2-201ENST00000339140 UHRF1BP1LA0JNW5 1464 aa12.13□□□□□ -0.47
FOXR2-201ENST00000339140 ATP10BO94823 1461 aa12.13□□□□□ -0.47
FOXR2-201ENST00000339140 TEX14Q8IWB6 1497 aa12.13□□□□□ -0.47
FOXR2-201ENST00000339140 ANKRD30BQ9BXX2 1392 aa12.12□□□□□ -0.47
FOXR2-201ENST00000339140 TCERG1O14776 1098 aaKnown RBP12.11□□□□□ -0.47
FOXR2-201ENST00000339140 ROCK1Q13464 1354 aa12.11□□□□□ -0.47
FOXR2-201ENST00000339140 ROCK2O75116 1388 aaKnown RBP12.1□□□□□ -0.47
FOXR2-201ENST00000339140 KDM6BO15054 1643 aa12.1□□□□□ -0.47
FOXR2-201ENST00000339140 ADCY10Q96PN6 1610 aa12.1□□□□□ -0.47
FOXR2-201ENST00000339140 DHX29Q7Z478 1369 aaKnown RBP12.09□□□□□ -0.47
FOXR2-201ENST00000339140 TROQ12816 1431 aaPredicted RBP12.09□□□□□ -0.47
FOXR2-201ENST00000339140 PPM1GO15355 546 aaPredicted RBP12.09□□□□□ -0.47
FOXR2-201ENST00000339140 ARID3CA6NKF2 412 aa12.08□□□□□ -0.48
FOXR2-201ENST00000339140 MS4A1P11836 297 aa12.08□□□□□ -0.48
FOXR2-201ENST00000339140 CHIC2Q9UKJ5 165 aa12.08□□□□□ -0.48
FOXR2-201ENST00000339140 KTN1Q86UP2 1357 aaKnown RBP12.07□□□□□ -0.48
FOXR2-201ENST00000339140 NBPF8Q3BBV2 869 aa12.07□□□□□ -0.48
FOXR2-201ENST00000339140 ZCCHC11Q5TAX3 1644 aaKnown RBP12.06□□□□□ -0.48
FOXR2-201ENST00000339140 PLEKHD1A6NEE1 506 aa12.05□□□□□ -0.48
FOXR2-201ENST00000339140 TMC1Q8TDI8 760 aa12.04□□□□□ -0.48
FOXR2-201ENST00000339140 PNISRQ8TF01 805 aaKnown RBP12.04□□□□□ -0.48
FOXR2-201ENST00000339140 KIF14Q15058 1648 aa12.04□□□□□ -0.48
FOXR2-201ENST00000339140 NEFMP07197 916 aa12.03□□□□□ -0.48
FOXR2-201ENST00000339140 DDRGK1Q96HY6 314 aa12.03□□□□□ -0.48
FOXR2-201ENST00000339140 DNMT1P26358 1616 aaKnown RBP12.03□□□□□ -0.48
FOXR2-201ENST00000339140 ANO8Q9HCE9 1232 aaPredicted RBP12.03□□□□□ -0.48
FOXR2-201ENST00000339140 WASHC2CQ9Y4E1 1318 aa12.03□□□□□ -0.48
FOXR2-201ENST00000339140 RIMBP3CA6NJZ7 1639 aa12.03□□□□□ -0.48
FOXR2-201ENST00000339140 RIMBP3BA6NNM3 1639 aa12.03□□□□□ -0.48
FOXR2-201ENST00000339140 BRD4O60885 1362 aaPredicted RBP12.03□□□□□ -0.48
FOXR2-201ENST00000339140 LRPPRCP42704 1394 aaKnown RBP12.03□□□□□ -0.48
FOXR2-201ENST00000339140 RIMBP3Q9UFD9 1639 aa12.03□□□□□ -0.48
FOXR2-201ENST00000339140 DAPK1P53355 1430 aa12.02□□□□□ -0.48
FOXR2-201ENST00000339140 MBD5Q9P267 1494 aa12.02□□□□□ -0.48
FOXR2-201ENST00000339140 RRP1P56182 461 aaKnown RBP12.02□□□□□ -0.49
FOXR2-201ENST00000339140 USP47Q96K76 1375 aa12.02□□□□□ -0.49
FOXR2-201ENST00000339140 KIF15Q9NS87 1388 aa12.02□□□□□ -0.49
FOXR2-201ENST00000339140 PDE4AP27815 886 aa12.01□□□□□ -0.49
FOXR2-201ENST00000339140 PDE3BQ13370 1112 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms