RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 TROQ12816 1431 aaPredicted RBP33.2■■■□□ 2.91
CLPTM1-201ENST00000337392 ABCC5O15440 1437 aa33.19■■■□□ 2.9
CLPTM1-201ENST00000337392 DAPK1P53355 1430 aa33.19■■■□□ 2.9
CLPTM1-201ENST00000337392 DDX10Q13206 875 aaKnown RBP33.17■■■□□ 2.9
CLPTM1-201ENST00000337392 KCNH8Q96L42 1107 aa33.14■■■□□ 2.89
CLPTM1-201ENST00000337392 MPHOSPH9Q99550 1183 aa33.12■■■□□ 2.89
CLPTM1-201ENST00000337392 GCC2Q8IWJ2 1684 aa33.11■■■□□ 2.89
CLPTM1-201ENST00000337392 GPATCH8Q9UKJ3 1502 aaKnown RBP33.1■■■□□ 2.89
CLPTM1-201ENST00000337392 CHD1O14646 1710 aa33.1■■■□□ 2.89
CLPTM1-201ENST00000337392 ATP10BO94823 1461 aa33.1■■■□□ 2.89
CLPTM1-201ENST00000337392 PLEKHD1A6NEE1 506 aa33.09■■■□□ 2.89
CLPTM1-201ENST00000337392 CAMSAP2Q08AD1 1489 aa33.07■■■□□ 2.88
CLPTM1-201ENST00000337392 PTPRGP23470 1445 aa33.05■■■□□ 2.88
CLPTM1-201ENST00000337392 DNMT1P26358 1616 aaKnown RBP33.04■■■□□ 2.88
CLPTM1-201ENST00000337392 ABCA8O94911 1581 aa33.04■■■□□ 2.88
CLPTM1-201ENST00000337392 TIMELESSQ9UNS1 1208 aa33.03■■■□□ 2.88
CLPTM1-201ENST00000337392 ERCC6L2Q5T890 1561 aa33.02■■■□□ 2.88
CLPTM1-201ENST00000337392 AKNAQ7Z591 1439 aa32.97■■■□□ 2.87
CLPTM1-201ENST00000337392 KDM5BQ9UGL1 1544 aa32.96■■■□□ 2.87
CLPTM1-201ENST00000337392 SLC4A1APQ9BWU0 796 aaKnown RBP32.96■■■□□ 2.87
CLPTM1-201ENST00000337392 HNRNPMP52272 730 aaKnown RBP eCLIP32.93■■■□□ 2.863e-10■■■■■ 34.9
CLPTM1-201ENST00000337392 ROCK1Q13464 1354 aa32.91■■■□□ 2.86
CLPTM1-201ENST00000337392 L3MBTL2Q969R5 705 aa32.9■■■□□ 2.86
CLPTM1-201ENST00000337392 NCOA1Q15788 1441 aa32.88■■■□□ 2.85
CLPTM1-201ENST00000337392 ADCY10Q96PN6 1610 aa32.87■■■□□ 2.85
CLPTM1-201ENST00000337392 CDC42BPAQ5VT25 1732 aa32.87■■■□□ 2.85
CLPTM1-201ENST00000337392 ABCC10Q5T3U5 1492 aa32.86■■■□□ 2.85
CLPTM1-201ENST00000337392 ITSN2Q9NZM3 1697 aa32.86■■■□□ 2.85
CLPTM1-201ENST00000337392 ANKRD30BQ9BXX2 1392 aa32.79■■■□□ 2.84
CLPTM1-201ENST00000337392 HSPA5P11021 654 aaKnown RBP32.74■■■□□ 2.83
CLPTM1-201ENST00000337392 NBPF8Q3BBV2 869 aa32.74■■■□□ 2.83
CLPTM1-201ENST00000337392 PZPP20742 1482 aa32.74■■■□□ 2.83
CLPTM1-201ENST00000337392 PKD2Q13563 968 aa32.71■■■□□ 2.83
CLPTM1-201ENST00000337392 ANKRD30AQ9BXX3 1397 aa32.71■■■□□ 2.83
CLPTM1-201ENST00000337392 C9orf84Q5VXU9 1444 aa32.71■■■□□ 2.83
CLPTM1-201ENST00000337392 CROCC2H7BZ55 1655 aa32.69■■■□□ 2.82
CLPTM1-201ENST00000337392 ANKRD50Q9ULJ7 1429 aa32.69■■■□□ 2.82
CLPTM1-201ENST00000337392 TSPY4P0CV99 314 aa32.68■■■□□ 2.82
CLPTM1-201ENST00000337392 TSPY10P0CW01 314 aa32.68■■■□□ 2.82
CLPTM1-201ENST00000337392 SHROOM2Q13796 1616 aa32.68■■■□□ 2.82
CLPTM1-201ENST00000337392 ADGBQ8N7X0 1667 aa32.67■■■□□ 2.82
CLPTM1-201ENST00000337392 ZNF326Q5BKZ1 582 aaKnown RBP32.66■■■□□ 2.82
CLPTM1-201ENST00000337392 RPRD2Q5VT52 1461 aaKnown RBP32.64■■■□□ 2.81
CLPTM1-201ENST00000337392 ADGRL2O95490 1459 aa32.63■■■□□ 2.81
CLPTM1-201ENST00000337392 TTC37Q6PGP7 1564 aa32.63■■■□□ 2.81
CLPTM1-201ENST00000337392 CDC42BPBQ9Y5S2 1711 aa32.62■■■□□ 2.81
CLPTM1-201ENST00000337392 NUP155O75694 1391 aa32.62■■■□□ 2.81
CLPTM1-201ENST00000337392 C11orf95C9JLR9 678 aaPredicted RBP32.61■■■□□ 2.81
CLPTM1-201ENST00000337392 WASHC2AQ641Q2 1341 aa32.6■■■□□ 2.81
CLPTM1-201ENST00000337392 SAMD9LQ8IVG5 1584 aa32.6■■■□□ 2.81
CLPTM1-201ENST00000337392 MBD5Q9P267 1494 aa32.59■■■□□ 2.81
CLPTM1-201ENST00000337392 KIF15Q9NS87 1388 aa32.59■■■□□ 2.81
CLPTM1-201ENST00000337392 TEX14Q8IWB6 1497 aa32.58■■■□□ 2.81
CLPTM1-201ENST00000337392 EIF4G2P78344 907 aaKnown RBP eCLIP32.55■■■□□ 2.8
CLPTM1-201ENST00000337392 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.55■■■□□ 2.8
CLPTM1-201ENST00000337392 ABCC2Q92887 1545 aa32.54■■■□□ 2.8
CLPTM1-201ENST00000337392 ANP32CO43423 234 aa32.54■■■□□ 2.8
CLPTM1-201ENST00000337392 ARHGAP5Q13017 1502 aa32.54■■■□□ 2.8
CLPTM1-201ENST00000337392 SYCP2Q9BX26 1530 aa32.53■■■□□ 2.8
CLPTM1-201ENST00000337392 KIAA1107Q9UPP5 1409 aa32.51■■■□□ 2.8
CLPTM1-201ENST00000337392 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.5■■■□□ 2.792e-7■■□□□ 11.9
CLPTM1-201ENST00000337392 PREX2Q70Z35 1606 aa32.5■■■□□ 2.79
CLPTM1-201ENST00000337392 CLASP1Q7Z460 1538 aa32.49■■■□□ 2.79
CLPTM1-201ENST00000337392 CCDC141Q6ZP82 1450 aa32.45■■■□□ 2.79
CLPTM1-201ENST00000337392 SHANK2Q9UPX8 1470 aa32.45■■■□□ 2.79
CLPTM1-201ENST00000337392 KDM2AQ9Y2K7 1162 aa32.43■■■□□ 2.78
CLPTM1-201ENST00000337392 CNGB1Q14028 1251 aaPredicted RBP32.42■■■□□ 2.78
CLPTM1-201ENST00000337392 ZCCHC11Q5TAX3 1644 aaKnown RBP32.4■■■□□ 2.78
CLPTM1-201ENST00000337392 ARHGEF12Q9NZN5 1544 aa32.4■■■□□ 2.78
CLPTM1-201ENST00000337392 ARHGEF5Q12774 1597 aa32.38■■■□□ 2.77
CLPTM1-201ENST00000337392 POLR3GLQ9BT43 218 aa32.37■■■□□ 2.77
CLPTM1-201ENST00000337392 MYO5CQ9NQX4 1742 aa32.31■■■□□ 2.76
CLPTM1-201ENST00000337392 CCDC184Q52MB2 194 aa32.3■■■□□ 2.76
CLPTM1-201ENST00000337392 AFAP1Q8N556 730 aa32.29■■■□□ 2.76
CLPTM1-201ENST00000337392 PLEKHH2Q8IVE3 1493 aa32.29■■■□□ 2.76
CLPTM1-201ENST00000337392 RGL3Q3MIN7 710 aa32.29■■■□□ 2.76
CLPTM1-201ENST00000337392 DCAF11Q8TEB1 546 aa32.28■■■□□ 2.76
CLPTM1-201ENST00000337392 CCDC7Q96M83 1385 aa32.27■■■□□ 2.76
CLPTM1-201ENST00000337392 KIF7Q2M1P5 1343 aa32.27■■■□□ 2.76
CLPTM1-201ENST00000337392 TRAPPC8Q9Y2L5 1435 aa32.26■■■□□ 2.75
CLPTM1-201ENST00000337392 SPATA31E1Q6ZUB1 1445 aa32.25■■■□□ 2.75
CLPTM1-201ENST00000337392 CCER2I3L3R5 266 aa32.25■■■□□ 2.75
CLPTM1-201ENST00000337392 FAM135AQ9P2D6 1515 aa32.24■■■□□ 2.75
CLPTM1-201ENST00000337392 PLCH2O75038 1416 aa32.23■■■□□ 2.75
CLPTM1-201ENST00000337392 EFCAB2Q5VUJ9 269 aa32.23■■■□□ 2.75
CLPTM1-201ENST00000337392 RSPH4AQ5TD94 716 aa32.22■■■□□ 2.75
CLPTM1-201ENST00000337392 USP47Q96K76 1375 aa32.19■■■□□ 2.74
CLPTM1-201ENST00000337392 SUPT16HQ9Y5B9 1047 aaKnown RBP32.17■■■□□ 2.74
CLPTM1-201ENST00000337392 KDM5DQ9BY66 1539 aa32.17■■■□□ 2.74
CLPTM1-201ENST00000337392 UHRF1BP1LA0JNW5 1464 aa32.17■■■□□ 2.74
CLPTM1-201ENST00000337392 CNTLNQ9NXG0 1405 aa32.16■■■□□ 2.74
CLPTM1-201ENST00000337392 CARD11Q9BXL7 1154 aa32.14■■■□□ 2.74
CLPTM1-201ENST00000337392 MYT1LQ9UL68 1186 aa32.11■■■□□ 2.73
CLPTM1-201ENST00000337392 PLA2R1Q13018 1463 aa32.11■■■□□ 2.73
CLPTM1-201ENST00000337392 BCORL1Q5H9F3 1711 aa32.11■■■□□ 2.73
CLPTM1-201ENST00000337392 BCANQ96GW7 911 aa32.08■■■□□ 2.73
CLPTM1-201ENST00000337392 ABCC1P33527 1531 aa32.07■■■□□ 2.72
CLPTM1-201ENST00000337392 SPAG9O60271 1321 aaKnown RBP32.07■■■□□ 2.72
CLPTM1-201ENST00000337392 PRKRIP1Q9H875 184 aaPredicted RBP32.07■■■□□ 2.72
CLPTM1-201ENST00000337392 CCDC144AA2RUR9 1427 aa32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms