RNA–Protein interactions for RNA: ENST00000336803.1

CLDN2-201, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN2, Length 2,959 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-201ENST00000336803 CROCC2H7BZ55 1655 aa13.38□□□□□ -0.27
CLDN2-201ENST00000336803 CDC42BPAQ5VT25 1732 aa13.38□□□□□ -0.27
CLDN2-201ENST00000336803 CAMSAP2Q08AD1 1489 aa13.37□□□□□ -0.27
CLDN2-201ENST00000336803 KDM6BO15054 1643 aa13.37□□□□□ -0.27
CLDN2-201ENST00000336803 ADGBQ8N7X0 1667 aa13.37□□□□□ -0.27
CLDN2-201ENST00000336803 ADGRL2O95490 1459 aa13.35□□□□□ -0.27
CLDN2-201ENST00000336803 PLEKHD1A6NEE1 506 aa13.34□□□□□ -0.27
CLDN2-201ENST00000336803 DENND4BO75064 1496 aaPredicted RBP13.34□□□□□ -0.27
CLDN2-201ENST00000336803 SIN3AQ96ST3 1273 aa13.33□□□□□ -0.28
CLDN2-201ENST00000336803 ABCC2Q92887 1545 aa13.33□□□□□ -0.28
CLDN2-201ENST00000336803 ZNF644Q9H582 1327 aaPredicted RBP13.32□□□□□ -0.28
CLDN2-201ENST00000336803 RRP7BPQ9NSQ0 103 aa13.32□□□□□ -0.28
CLDN2-201ENST00000336803 ERCC6L2Q5T890 1561 aa13.32□□□□□ -0.28
CLDN2-201ENST00000336803 CFDP1Q9UEE9 299 aaPredicted RBP13.32□□□□□ -0.28
CLDN2-201ENST00000336803 SHANK2Q9UPX8 1470 aa13.31□□□□□ -0.28
CLDN2-201ENST00000336803 CHIC2Q9UKJ5 165 aa13.31□□□□□ -0.28
CLDN2-201ENST00000336803 UHRF1BP1LA0JNW5 1464 aa13.31□□□□□ -0.28
CLDN2-201ENST00000336803 ARHGEF5Q12774 1597 aa13.29□□□□□ -0.28
CLDN2-201ENST00000336803 PPP1R15AO75807 674 aaPredicted RBP13.29□□□□□ -0.28
CLDN2-201ENST00000336803 PREX2Q70Z35 1606 aa13.29□□□□□ -0.28
CLDN2-201ENST00000336803 NCOA1Q15788 1441 aa13.29□□□□□ -0.28
CLDN2-201ENST00000336803 PRKCSHP14314 528 aaPredicted RBP13.29□□□□□ -0.28
CLDN2-201ENST00000336803 KDM5BQ9UGL1 1544 aa13.28□□□□□ -0.28
CLDN2-201ENST00000336803 CDC42BPBQ9Y5S2 1711 aa13.28□□□□□ -0.28
CLDN2-201ENST00000336803 NEUROD1Q13562 356 aa13.27□□□□□ -0.28
CLDN2-201ENST00000336803 MPHOSPH9Q99550 1183 aa13.24□□□□□ -0.29
CLDN2-201ENST00000336803 TONSLQ96HA7 1378 aa13.24□□□□□ -0.29
CLDN2-201ENST00000336803 MBD5Q9P267 1494 aa13.24□□□□□ -0.29
CLDN2-201ENST00000336803 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.24□□□□□ -0.29
CLDN2-201ENST00000336803 SAMD9LQ8IVG5 1584 aa13.24□□□□□ -0.29
CLDN2-201ENST00000336803 ZCCHC11Q5TAX3 1644 aaKnown RBP13.24□□□□□ -0.29
CLDN2-201ENST00000336803 ANKRD30AQ9BXX3 1397 aa13.23□□□□□ -0.29
CLDN2-201ENST00000336803 TTC37Q6PGP7 1564 aa13.22□□□□□ -0.29
CLDN2-201ENST00000336803 MIER1Q8N108 512 aa13.22□□□□□ -0.29
CLDN2-201ENST00000336803 MAST1Q9Y2H9 1570 aa13.21□□□□□ -0.29
CLDN2-201ENST00000336803 PZPP20742 1482 aa13.21□□□□□ -0.29
CLDN2-201ENST00000336803 ANKRD30BQ9BXX2 1392 aa13.21□□□□□ -0.29
CLDN2-201ENST00000336803 MYO5CQ9NQX4 1742 aa13.21□□□□□ -0.29
CLDN2-201ENST00000336803 TRIM52Q96A61 297 aa13.21□□□□□ -0.29
CLDN2-201ENST00000336803 BCL11AQ9H165 835 aa13.21□□□□□ -0.29
CLDN2-201ENST00000336803 C9orf84Q5VXU9 1444 aa13.21□□□□□ -0.3
CLDN2-201ENST00000336803 ERICH6Q7L0X2 663 aa13.2□□□□□ -0.3
CLDN2-201ENST00000336803 KDM5DQ9BY66 1539 aa13.2□□□□□ -0.3
CLDN2-201ENST00000336803 RSPH4AQ5TD94 716 aa13.2□□□□□ -0.3
CLDN2-201ENST00000336803 CCDC141Q6ZP82 1450 aa13.19□□□□□ -0.3
CLDN2-201ENST00000336803 ZNF777Q9ULD5 760 aaPredicted RBP13.18□□□□□ -0.3
CLDN2-201ENST00000336803 RPRD2Q5VT52 1461 aaKnown RBP13.18□□□□□ -0.3
CLDN2-201ENST00000336803 KIAA1107Q9UPP5 1409 aa13.18□□□□□ -0.3
CLDN2-201ENST00000336803 ANKRD50Q9ULJ7 1429 aa13.18□□□□□ -0.3
CLDN2-201ENST00000336803 PLEKHH2Q8IVE3 1493 aa13.17□□□□□ -0.3
CLDN2-201ENST00000336803 ARAP3Q8WWN8 1544 aa13.16□□□□□ -0.3
CLDN2-201ENST00000336803 ARHGAP5Q13017 1502 aa13.15□□□□□ -0.3
CLDN2-201ENST00000336803 PLXNC1O60486 1568 aa13.14□□□□□ -0.31
CLDN2-201ENST00000336803 PLCH2O75038 1416 aa13.14□□□□□ -0.31
CLDN2-201ENST00000336803 TSPY4P0CV99 314 aa13.14□□□□□ -0.31
CLDN2-201ENST00000336803 TSPY10P0CW01 314 aa13.14□□□□□ -0.31
CLDN2-201ENST00000336803 TEX14Q8IWB6 1497 aa13.13□□□□□ -0.31
CLDN2-201ENST00000336803 SYCP2Q9BX26 1530 aa13.13□□□□□ -0.31
CLDN2-201ENST00000336803 SLC4A1APQ9BWU0 796 aaKnown RBP13.13□□□□□ -0.31
CLDN2-201ENST00000336803 CENPBP07199 599 aaPredicted RBP13.12□□□□□ -0.31
CLDN2-201ENST00000336803 HNRNPMP52272 730 aaKnown RBP eCLIP13.12□□□□□ -0.31
CLDN2-201ENST00000336803 KIF15Q9NS87 1388 aa13.11□□□□□ -0.31
CLDN2-201ENST00000336803 UNC13BO14795 1591 aa13.1□□□□□ -0.31
CLDN2-201ENST00000336803 ABCC1P33527 1531 aa13.09□□□□□ -0.31
CLDN2-201ENST00000336803 ARHGEF12Q9NZN5 1544 aa13.09□□□□□ -0.31
CLDN2-201ENST00000336803 FOXD1Q16676 465 aa13.08□□□□□ -0.31
CLDN2-201ENST00000336803 L3MBTL2Q969R5 705 aa13.08□□□□□ -0.32
CLDN2-201ENST00000336803 WDR7Q9Y4E6 1490 aa13.08□□□□□ -0.32
CLDN2-201ENST00000336803 ABCA9Q8IUA7 1624 aa13.07□□□□□ -0.32
CLDN2-201ENST00000336803 DUOX2Q9NRD8 1548 aa13.06□□□□□ -0.32
CLDN2-201ENST00000336803 NUP155O75694 1391 aa13.05□□□□□ -0.32
CLDN2-201ENST00000336803 PKD2Q13563 968 aa13.05□□□□□ -0.32
CLDN2-201ENST00000336803 EFCAB2Q5VUJ9 269 aa13.05□□□□□ -0.32
CLDN2-201ENST00000336803 MAGI2Q86UL8 1455 aa13.04□□□□□ -0.32
CLDN2-201ENST00000336803 FAM135AQ9P2D6 1515 aa13.04□□□□□ -0.32
CLDN2-201ENST00000336803 IQGAP3Q86VI3 1631 aa13.04□□□□□ -0.32
CLDN2-201ENST00000336803 ERBINQ96RT1 1412 aa13.03□□□□□ -0.32
CLDN2-201ENST00000336803 OSCARQ8IYS5 282 aa13.03□□□□□ -0.32
CLDN2-201ENST00000336803 RTEL1-TNFRSF6BF6WH68 1400 aa13.03□□□□□ -0.32
CLDN2-201ENST00000336803 KCNH8Q96L42 1107 aa13.03□□□□□ -0.32
CLDN2-201ENST00000336803 UHRF1BP1Q6BDS2 1440 aa13.01□□□□□ -0.33
CLDN2-201ENST00000336803 POLR1AO95602 1720 aaPredicted RBP13.01□□□□□ -0.33
CLDN2-201ENST00000336803 SPATA31E1Q6ZUB1 1445 aa13□□□□□ -0.33
CLDN2-201ENST00000336803 DDX10Q13206 875 aaKnown RBP13□□□□□ -0.33
CLDN2-201ENST00000336803 NBPF8Q3BBV2 869 aa13□□□□□ -0.33
CLDN2-201ENST00000336803 TRAPPC8Q9Y2L5 1435 aa13□□□□□ -0.33
CLDN2-201ENST00000336803 HSPA5P11021 654 aaKnown RBP12.99□□□□□ -0.33
CLDN2-201ENST00000336803 ASXL2Q76L83 1435 aa12.99□□□□□ -0.33
CLDN2-201ENST00000336803 EIF4G2P78344 907 aaKnown RBP eCLIP12.99□□□□□ -0.33
CLDN2-201ENST00000336803 ZFYVE16Q7Z3T8 1539 aa12.99□□□□□ -0.33
CLDN2-201ENST00000336803 HIRIP3Q9BW71 556 aaPredicted RBP12.98□□□□□ -0.33
CLDN2-201ENST00000336803 INO80Q9ULG1 1556 aaPredicted RBP12.98□□□□□ -0.33
CLDN2-201ENST00000336803 ATP10AO60312 1499 aa12.97□□□□□ -0.33
CLDN2-201ENST00000336803 AEBP2Q6ZN18 517 aaPredicted RBP12.97□□□□□ -0.33
CLDN2-201ENST00000336803 DEPDC5O75140 1603 aa12.96□□□□□ -0.33
CLDN2-201ENST00000336803 FANCAO15360 1455 aa12.96□□□□□ -0.33
CLDN2-201ENST00000336803 YTHDC1Q96MU7 727 aaKnown RBP12.95□□□□□ -0.34
CLDN2-201ENST00000336803 CCER2I3L3R5 266 aa12.94□□□□□ -0.34
CLDN2-201ENST00000336803 RALGAPBQ86X10 1494 aa12.94□□□□□ -0.34
CLDN2-201ENST00000336803 PLA2R1Q13018 1463 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms