RNA–Protein interactions for RNA: ENST00000336292.10

SYNM-202, Transcript of synemin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNM, Length 7,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-202ENST00000336292 GTF2E1P29083 439 aaPredicted RBP23.19■■□□□ 1.3
SYNM-202ENST00000336292 HSP90AB1P08238 724 aaKnown RBP23.17■■□□□ 1.3
SYNM-202ENST00000336292 ERICH6BQ5W0A0 696 aa23.17■■□□□ 1.3
SYNM-202ENST00000336292 NGDNQ8NEJ9 315 aaKnown RBP23.17■■□□□ 1.3
SYNM-202ENST00000336292 SYTL4Q96C24 671 aaPredicted RBP23.15■■□□□ 1.3
SYNM-202ENST00000336292 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.15■■□□□ 1.3
SYNM-202ENST00000336292 FRAT2O75474 233 aaPredicted RBP23.15■■□□□ 1.3
SYNM-202ENST00000336292 GORABQ5T7V8 394 aa23.14■■□□□ 1.29
SYNM-202ENST00000336292 VPS53Q5VIR6 699 aa23.13■■□□□ 1.29
SYNM-202ENST00000336292 EID1Q9Y6B2 187 aa23.13■■□□□ 1.29
SYNM-202ENST00000336292 HDGFL2Q7Z4V5 671 aaPredicted RBP23.12■■□□□ 1.29
SYNM-202ENST00000336292 TMF1P82094 1093 aa23.11■■□□□ 1.29
SYNM-202ENST00000336292 NGEFQ8N5V2 710 aa23.11■■□□□ 1.29
SYNM-202ENST00000336292 B4GALNT3Q6L9W6 998 aa23.11■■□□□ 1.29
SYNM-202ENST00000336292 RAD21O60216 631 aa23.1■■□□□ 1.29
SYNM-202ENST00000336292 KIF27Q86VH2 1401 aa23.09■■□□□ 1.29
SYNM-202ENST00000336292 FBXW7Q969H0 707 aa23.09■■□□□ 1.29
SYNM-202ENST00000336292 PNNQ9H307 717 aaKnown RBP23.08■■□□□ 1.29
SYNM-202ENST00000336292 WWC1Q8IX03 1113 aa23.07■■□□□ 1.28
SYNM-202ENST00000336292 KIF3BO15066 747 aa23.06■■□□□ 1.28
SYNM-202ENST00000336292 PPP1R1BQ9UD71 204 aaPredicted RBP23.05■■□□□ 1.28
SYNM-202ENST00000336292 HNRNPMP52272 730 aaKnown RBP eCLIP23.04■■□□□ 1.28
SYNM-202ENST00000336292 GOLGA6L4A6NEF3 574 aa23.04■■□□□ 1.28
SYNM-202ENST00000336292 SLC4A10Q6U841 1118 aa23.03■■□□□ 1.28
SYNM-202ENST00000336292 GOLGA3Q08378 1498 aa23.03■■□□□ 1.28
SYNM-202ENST00000336292 WRNQ14191 1432 aaPredicted RBP eCLIP23.02■■□□□ 1.28
SYNM-202ENST00000336292 AMPHP49418 695 aa23.02■■□□□ 1.28
SYNM-202ENST00000336292 CEP162Q5TB80 1403 aa23.01■■□□□ 1.27
SYNM-202ENST00000336292 CREBRFQ8IUR6 639 aa23.01■■□□□ 1.27
SYNM-202ENST00000336292 U2AF1L5P0DN76 240 aaPredicted RBP23■■□□□ 1.27
SYNM-202ENST00000336292 U2AF1Q01081 240 aaKnown RBP eCLIP23■■□□□ 1.27
SYNM-202ENST00000336292 SAMD1Q6SPF0 538 aaPredicted RBP23■■□□□ 1.27
SYNM-202ENST00000336292 CECR2Q9BXF3 1484 aa22.99■■□□□ 1.27
SYNM-202ENST00000336292 DDRGK1Q96HY6 314 aa22.99■■□□□ 1.27
SYNM-202ENST00000336292 FBXO3Q9UK99 471 aa22.99■■□□□ 1.27
SYNM-202ENST00000336292 WASHC2CQ9Y4E1 1318 aa22.99■■□□□ 1.27
SYNM-202ENST00000336292 CUX2O14529 1486 aa22.99■■□□□ 1.27
SYNM-202ENST00000336292 TOMM22Q9NS69 142 aa22.98■■□□□ 1.27
SYNM-202ENST00000336292 PKD2Q13563 968 aa22.96■■□□□ 1.27
SYNM-202ENST00000336292 DRC7Q8IY82 874 aa22.96■■□□□ 1.27
SYNM-202ENST00000336292 KRI1Q8N9T8 703 aaKnown RBP22.95■■□□□ 1.26
SYNM-202ENST00000336292 HSP90B1P14625 803 aaKnown RBP22.94■■□□□ 1.26
SYNM-202ENST00000336292 NOL8Q76FK4 1167 aaKnown RBP22.92■■□□□ 1.26
SYNM-202ENST00000336292 CCDC146Q8IYE0 955 aa22.91■■□□□ 1.26
SYNM-202ENST00000336292 ITPRIPQ8IWB1 547 aa22.91■■□□□ 1.26
SYNM-202ENST00000336292 KIAA1211Q6ZU35 1233 aa22.9■■□□□ 1.26
SYNM-202ENST00000336292 RTN4Q9NQC3 1192 aaKnown RBP22.9■■□□□ 1.26
SYNM-202ENST00000336292 TRIM6-TRIM34B2RNG4 842 aa22.9■■□□□ 1.26
SYNM-202ENST00000336292 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.25
SYNM-202ENST00000336292 TRAK1Q9UPV9 953 aa22.88■■□□□ 1.25
SYNM-202ENST00000336292 NECTIN2Q92692 538 aa22.88■■□□□ 1.25
SYNM-202ENST00000336292 CCDC180Q9P1Z9 1646 aa22.87■■□□□ 1.25
SYNM-202ENST00000336292 ROCK2O75116 1388 aaKnown RBP22.87■■□□□ 1.25
SYNM-202ENST00000336292 GOLGA6L6A8MZA4 724 aa22.85■■□□□ 1.25
SYNM-202ENST00000336292 MCCP23508 829 aa22.85■■□□□ 1.25
SYNM-202ENST00000336292 SPAG9O60271 1321 aaKnown RBP22.85■■□□□ 1.25
SYNM-202ENST00000336292 DCAF8L1A6NGE4 600 aa22.85■■□□□ 1.25
SYNM-202ENST00000336292 RASSF8Q8NHQ8 419 aa22.85■■□□□ 1.25
SYNM-202ENST00000336292 CARMIL1Q5VZK9 1371 aa22.85■■□□□ 1.25
SYNM-202ENST00000336292 CWC22Q9HCG8 908 aaKnown RBP22.84■■□□□ 1.25
SYNM-202ENST00000336292 USP35Q9P2H5 1018 aa22.83■■□□□ 1.24
SYNM-202ENST00000336292 MARCH6O60337 910 aa22.82■■□□□ 1.24
SYNM-202ENST00000336292 CNKSR2Q8WXI2 1034 aa22.8■■□□□ 1.24
SYNM-202ENST00000336292 DCAF1Q9Y4B6 1507 aa22.8■■□□□ 1.24
SYNM-202ENST00000336292 STK31Q9BXU1 1019 aa22.8■■□□□ 1.24
SYNM-202ENST00000336292 CARMIL2Q6F5E8 1435 aa22.79■■□□□ 1.24
SYNM-202ENST00000336292 NUTM2GQ5VZR2 741 aa22.79■■□□□ 1.24
SYNM-202ENST00000336292 EFCAB2Q5VUJ9 269 aa22.79■■□□□ 1.24
SYNM-202ENST00000336292 PIP4K2BP78356 416 aa22.79■■□□□ 1.24
SYNM-202ENST00000336292 HSCBQ8IWL3 235 aa22.78■■□□□ 1.24
SYNM-202ENST00000336292 CHMP4BQ9H444 224 aaKnown RBP22.78■■□□□ 1.24
SYNM-202ENST00000336292 NOC3LQ8WTT2 800 aaKnown RBP22.77■■□□□ 1.24
SYNM-202ENST00000336292 TRIM34Q9BYJ4 488 aa22.77■■□□□ 1.24
SYNM-202ENST00000336292 NUTM2BA6NNL0 878 aaPredicted RBP22.76■■□□□ 1.23
SYNM-202ENST00000336292 NUTM2EB1AL46 878 aaPredicted RBP22.76■■□□□ 1.23
SYNM-202ENST00000336292 ELL2O00472 640 aaPredicted RBP22.76■■□□□ 1.23
SYNM-202ENST00000336292 NUTM2AQ8IVF1 878 aaPredicted RBP22.76■■□□□ 1.23
SYNM-202ENST00000336292 FOXD4L1Q9NU39 408 aa22.76■■□□□ 1.23
SYNM-202ENST00000336292 NUP155O75694 1391 aa22.76■■□□□ 1.23
SYNM-202ENST00000336292 PSME1Q06323 249 aa22.75■■□□□ 1.23
SYNM-202ENST00000336292 RRP7AQ9Y3A4 280 aaKnown RBP22.75■■□□□ 1.23
SYNM-202ENST00000336292 GLIPR1L2Q4G1C9 344 aa22.75■■□□□ 1.23
SYNM-202ENST00000336292 CTDP1Q9Y5B0 961 aaPredicted RBP22.75■■□□□ 1.23
SYNM-202ENST00000336292 MS4A1P11836 297 aa22.74■■□□□ 1.23
SYNM-202ENST00000336292 CLUAP1Q96AJ1 413 aa22.74■■□□□ 1.23
SYNM-202ENST00000336292 C1orf141Q5JVX7 400 aa22.74■■□□□ 1.23
SYNM-202ENST00000336292 KIAA2012Q0VF49 1180 aa22.74■■□□□ 1.23
SYNM-202ENST00000336292 EIF2S2P20042 333 aaKnown RBP22.73■■□□□ 1.23
SYNM-202ENST00000336292 FAM69CQ0P6D2 419 aa22.73■■□□□ 1.23
SYNM-202ENST00000336292 FOXD4L5Q5VV16 416 aaPredicted RBP22.73■■□□□ 1.23
SYNM-202ENST00000336292 FOXD4L4Q8WXT5 416 aaPredicted RBP22.73■■□□□ 1.23
SYNM-202ENST00000336292 NAP1L5Q96NT1 182 aaPredicted RBP22.72■■□□□ 1.23
SYNM-202ENST00000336292 SOGA1O94964 1423 aa22.72■■□□□ 1.23
SYNM-202ENST00000336292 ARID3AQ99856 593 aa22.72■■□□□ 1.23
SYNM-202ENST00000336292 ZNF428Q96B54 188 aa22.71■■□□□ 1.23
SYNM-202ENST00000336292 MYO15BQ96JP2 1530 aa22.71■■□□□ 1.23
SYNM-202ENST00000336292 L1TD1Q5T7N2 865 aaKnown RBP22.7■■□□□ 1.22
SYNM-202ENST00000336292 FAM177BA6PVY3 158 aa22.69■■□□□ 1.22
SYNM-202ENST00000336292 HSPA5P11021 654 aaKnown RBP22.69■■□□□ 1.22
SYNM-202ENST00000336292 NACADO15069 1562 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms