RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 MPHOSPH9Q99550 1183 aa18.05■□□□□ 0.48
LIMK1-201ENST00000336180 TROQ12816 1431 aaPredicted RBP18.04■□□□□ 0.48
LIMK1-201ENST00000336180 PPP1R15AO75807 674 aaPredicted RBP18.04■□□□□ 0.48
LIMK1-201ENST00000336180 ABCC5O15440 1437 aa18.03■□□□□ 0.48
LIMK1-201ENST00000336180 ATP10BO94823 1461 aa18.03■□□□□ 0.48
LIMK1-201ENST00000336180 UACAQ9BZF9 1416 aa18.03■□□□□ 0.48
LIMK1-201ENST00000336180 CHD1O14646 1710 aa18.02■□□□□ 0.48
LIMK1-201ENST00000336180 DAPK1P53355 1430 aa18.02■□□□□ 0.48
LIMK1-201ENST00000336180 SLC4A1APQ9BWU0 796 aaKnown RBP18.02■□□□□ 0.47
LIMK1-201ENST00000336180 TCOF1Q13428 1488 aaKnown RBP17.99■□□□□ 0.47
LIMK1-201ENST00000336180 BCL11AQ9H165 835 aa17.99■□□□□ 0.47
LIMK1-201ENST00000336180 GPATCH8Q9UKJ3 1502 aaKnown RBP17.99■□□□□ 0.47
LIMK1-201ENST00000336180 MIA2Q96PC5 1412 aa17.98■□□□□ 0.47
LIMK1-201ENST00000336180 ZNF326Q5BKZ1 582 aaKnown RBP17.98■□□□□ 0.47
LIMK1-201ENST00000336180 CENPBP07199 599 aaPredicted RBP17.98■□□□□ 0.47
LIMK1-201ENST00000336180 GTF3C3Q9Y5Q9 886 aa17.98■□□□□ 0.47
LIMK1-201ENST00000336180 CAMSAP2Q08AD1 1489 aa17.97■□□□□ 0.47
LIMK1-201ENST00000336180 DENND4BO75064 1496 aaPredicted RBP17.94■□□□□ 0.46
LIMK1-201ENST00000336180 CNGB1Q14028 1251 aaPredicted RBP17.94■□□□□ 0.46
LIMK1-201ENST00000336180 L3MBTL2Q969R5 705 aa17.93■□□□□ 0.46
LIMK1-201ENST00000336180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.91■□□□□ 0.46
LIMK1-201ENST00000336180 ABCA8O94911 1581 aa17.91■□□□□ 0.46
LIMK1-201ENST00000336180 TSPY4P0CV99 314 aa17.89■□□□□ 0.45
LIMK1-201ENST00000336180 TSPY10P0CW01 314 aa17.89■□□□□ 0.45
LIMK1-201ENST00000336180 PKD2Q13563 968 aa17.88■□□□□ 0.45
LIMK1-201ENST00000336180 AKNAQ7Z591 1439 aa17.85■□□□□ 0.45
LIMK1-201ENST00000336180 POLR3GLQ9BT43 218 aa17.85■□□□□ 0.45
LIMK1-201ENST00000336180 NCOA1Q15788 1441 aa17.85■□□□□ 0.45
LIMK1-201ENST00000336180 DNMT1P26358 1616 aaKnown RBP17.84■□□□□ 0.45
LIMK1-201ENST00000336180 NBPF8Q3BBV2 869 aa17.84■□□□□ 0.45
LIMK1-201ENST00000336180 HSPA5P11021 654 aaKnown RBP17.83■□□□□ 0.44
LIMK1-201ENST00000336180 KDM2AQ9Y2K7 1162 aa17.83■□□□□ 0.44
LIMK1-201ENST00000336180 ABCC10Q5T3U5 1492 aa17.82■□□□□ 0.44
LIMK1-201ENST00000336180 NUP155O75694 1391 aa17.81■□□□□ 0.44
LIMK1-201ENST00000336180 MYT1LQ9UL68 1186 aa17.81■□□□□ 0.44
LIMK1-201ENST00000336180 GCC2Q8IWJ2 1684 aa17.81■□□□□ 0.44
LIMK1-201ENST00000336180 ANKRD30AQ9BXX3 1397 aa17.81■□□□□ 0.44
LIMK1-201ENST00000336180 C9orf84Q5VXU9 1444 aa17.8■□□□□ 0.44
LIMK1-201ENST00000336180 TIMELESSQ9UNS1 1208 aa17.79■□□□□ 0.44
LIMK1-201ENST00000336180 ROCK1Q13464 1354 aa17.79■□□□□ 0.44
LIMK1-201ENST00000336180 ANKRD50Q9ULJ7 1429 aa17.79■□□□□ 0.44
LIMK1-201ENST00000336180 CDC42BPAQ5VT25 1732 aa17.78■□□□□ 0.44
LIMK1-201ENST00000336180 ERICH6Q7L0X2 663 aa17.77■□□□□ 0.44
LIMK1-201ENST00000336180 ANKRD30BQ9BXX2 1392 aa17.77■□□□□ 0.44
LIMK1-201ENST00000336180 KIF15Q9NS87 1388 aa17.77■□□□□ 0.44
LIMK1-201ENST00000336180 ARHGAP5Q13017 1502 aa17.75■□□□□ 0.43
LIMK1-201ENST00000336180 C11orf95C9JLR9 678 aaPredicted RBP17.75■□□□□ 0.43
LIMK1-201ENST00000336180 RGL3Q3MIN7 710 aa17.75■□□□□ 0.43
LIMK1-201ENST00000336180 KDM5BQ9UGL1 1544 aa17.74■□□□□ 0.43
LIMK1-201ENST00000336180 PZPP20742 1482 aa17.74■□□□□ 0.43
LIMK1-201ENST00000336180 ITSN2Q9NZM3 1697 aa17.74■□□□□ 0.43
LIMK1-201ENST00000336180 AFAP1Q8N556 730 aa17.73■□□□□ 0.43
LIMK1-201ENST00000336180 TTC37Q6PGP7 1564 aa17.73■□□□□ 0.43
LIMK1-201ENST00000336180 SLC24A1O60721 1099 aa17.73■□□□□ 0.43
LIMK1-201ENST00000336180 SYCP2Q9BX26 1530 aa17.71■□□□□ 0.43
LIMK1-201ENST00000336180 EIF4G2P78344 907 aaKnown RBP eCLIP17.7■□□□□ 0.42
LIMK1-201ENST00000336180 ADCY10Q96PN6 1610 aa17.7■□□□□ 0.42
LIMK1-201ENST00000336180 WASHC2AQ641Q2 1341 aa17.69■□□□□ 0.42
LIMK1-201ENST00000336180 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.69■□□□□ 0.42
LIMK1-201ENST00000336180 ABCC2Q92887 1545 aa17.69■□□□□ 0.42
LIMK1-201ENST00000336180 SAMD9LQ8IVG5 1584 aa17.69■□□□□ 0.42
LIMK1-201ENST00000336180 ANP32CO43423 234 aa17.68■□□□□ 0.42
LIMK1-201ENST00000336180 MBD5Q9P267 1494 aa17.68■□□□□ 0.42
LIMK1-201ENST00000336180 SENP3-EIF4A1A0A087X0R7 540 aa17.68■□□□□ 0.42
LIMK1-201ENST00000336180 SHROOM2Q13796 1616 aa17.68■□□□□ 0.42
LIMK1-201ENST00000336180 DCAF11Q8TEB1 546 aa17.66■□□□□ 0.42
LIMK1-201ENST00000336180 CDC42BPBQ9Y5S2 1711 aa17.66■□□□□ 0.42
LIMK1-201ENST00000336180 CLASP1Q7Z460 1538 aa17.65■□□□□ 0.42
LIMK1-201ENST00000336180 OSCARQ8IYS5 282 aa17.64■□□□□ 0.42
LIMK1-201ENST00000336180 RPRD2Q5VT52 1461 aaKnown RBP17.64■□□□□ 0.41
LIMK1-201ENST00000336180 EFCAB2Q5VUJ9 269 aa17.64■□□□□ 0.41
LIMK1-201ENST00000336180 KIAA1107Q9UPP5 1409 aa17.64■□□□□ 0.41
LIMK1-201ENST00000336180 ARHGEF12Q9NZN5 1544 aa17.63■□□□□ 0.41
LIMK1-201ENST00000336180 CCDC141Q6ZP82 1450 aa17.63■□□□□ 0.41
LIMK1-201ENST00000336180 ADGRL2O95490 1459 aa17.62■□□□□ 0.41
LIMK1-201ENST00000336180 TRAPPC8Q9Y2L5 1435 aa17.61■□□□□ 0.41
LIMK1-201ENST00000336180 PLEKHH2Q8IVE3 1493 aa17.61■□□□□ 0.41
LIMK1-201ENST00000336180 ZCCHC11Q5TAX3 1644 aaKnown RBP17.61■□□□□ 0.41
LIMK1-201ENST00000336180 CROCC2H7BZ55 1655 aa17.6■□□□□ 0.41
LIMK1-201ENST00000336180 ADGBQ8N7X0 1667 aa17.6■□□□□ 0.41
LIMK1-201ENST00000336180 TEX14Q8IWB6 1497 aa17.59■□□□□ 0.41
LIMK1-201ENST00000336180 CCDC184Q52MB2 194 aa17.59■□□□□ 0.41
LIMK1-201ENST00000336180 SENP3Q9H4L4 574 aaPredicted RBP17.58■□□□□ 0.4
LIMK1-201ENST00000336180 PREX2Q70Z35 1606 aa17.58■□□□□ 0.4
LIMK1-201ENST00000336180 SPAG9O60271 1321 aaKnown RBP17.56■□□□□ 0.4
LIMK1-201ENST00000336180 NPM1P06748 294 aaKnown RBP eCLIP17.55■□□□□ 0.4
LIMK1-201ENST00000336180 CARD11Q9BXL7 1154 aa17.55■□□□□ 0.4
LIMK1-201ENST00000336180 PLCH2O75038 1416 aa17.54■□□□□ 0.4
LIMK1-201ENST00000336180 CYB5RLQ6IPT4 315 aa17.53■□□□□ 0.4
LIMK1-201ENST00000336180 BCANQ96GW7 911 aa17.53■□□□□ 0.4
LIMK1-201ENST00000336180 KIF7Q2M1P5 1343 aa17.53■□□□□ 0.4
LIMK1-201ENST00000336180 NBPF1Q3BBV0 1214 aa17.52■□□□□ 0.39
LIMK1-201ENST00000336180 SHANK2Q9UPX8 1470 aa17.52■□□□□ 0.39
LIMK1-201ENST00000336180 KIF3BO15066 747 aa17.51■□□□□ 0.39
LIMK1-201ENST00000336180 RSPH4AQ5TD94 716 aa17.51■□□□□ 0.39
LIMK1-201ENST00000336180 MYO5CQ9NQX4 1742 aa17.49■□□□□ 0.39
LIMK1-201ENST00000336180 FAM9BQ8IZU0 186 aa17.49■□□□□ 0.39
LIMK1-201ENST00000336180 ASXL2Q76L83 1435 aa17.49■□□□□ 0.39
LIMK1-201ENST00000336180 SCAPERQ9BY12 1400 aa17.49■□□□□ 0.39
LIMK1-201ENST00000336180 USP47Q96K76 1375 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms