RNA–Protein interactions for RNA: ENST00000335753.8

SLK-201, Transcript of STE20 like kinase, humanhuman

TSL 1 (best) BASIC

Gene SLK, Length 7,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLK-201ENST00000335753 RTF1Q92541 710 aaKnown RBP20.31■□□□□ 0.84
SLK-201ENST00000335753 RAD21O60216 631 aa20.3■□□□□ 0.84
SLK-201ENST00000335753 SAFB2Q14151 953 aaKnown RBP eCLIP20.3■□□□□ 0.84
SLK-201ENST00000335753 SUPT16HQ9Y5B9 1047 aaKnown RBP20.28■□□□□ 0.84
SLK-201ENST00000335753 TCEAL9Q9UHQ7 104 aa20.27■□□□□ 0.84
SLK-201ENST00000335753 MSH5O43196 834 aa20.27■□□□□ 0.84
SLK-201ENST00000335753 GZF1Q9H116 711 aaPredicted RBP20.27■□□□□ 0.84
SLK-201ENST00000335753 TPM4P67936 248 aa20.26■□□□□ 0.83
SLK-201ENST00000335753 TOMM22Q9NS69 142 aa20.24■□□□□ 0.83
SLK-201ENST00000335753 CHMP4BQ9H444 224 aaKnown RBP20.24■□□□□ 0.83
SLK-201ENST00000335753 CALRP27797 417 aaKnown RBP20.23■□□□□ 0.83
SLK-201ENST00000335753 KLHL34Q8N239 644 aa20.23■□□□□ 0.83
SLK-201ENST00000335753 GTF2E1P29083 439 aaPredicted RBP20.22■□□□□ 0.83
SLK-201ENST00000335753 CDCA8Q53HL2 280 aa20.21■□□□□ 0.83
SLK-201ENST00000335753 CWC22Q9HCG8 908 aaKnown RBP20.21■□□□□ 0.83
SLK-201ENST00000335753 MTUS2Q5JR59 1369 aa20.21■□□□□ 0.83
SLK-201ENST00000335753 SRPK2P78362 688 aaKnown RBP20.2■□□□□ 0.82
SLK-201ENST00000335753 B4GALNT3Q6L9W6 998 aa20.2■□□□□ 0.82
SLK-201ENST00000335753 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.19■□□□□ 0.826e-6■■■■■ 48.1
SLK-201ENST00000335753 TPD52L1Q16890 204 aaPredicted RBP20.17■□□□□ 0.82
SLK-201ENST00000335753 CTDP1Q9Y5B0 961 aaPredicted RBP20.17■□□□□ 0.82
SLK-201ENST00000335753 TPM3P06753 285 aa20.17■□□□□ 0.82
SLK-201ENST00000335753 CCAR2Q8N163 923 aaKnown RBP20.17■□□□□ 0.82
SLK-201ENST00000335753 PHF23Q9BUL5 403 aaPredicted RBP20.17■□□□□ 0.82
SLK-201ENST00000335753 SETQ01105 290 aaPredicted RBP20.16■□□□□ 0.82
SLK-201ENST00000335753 NOL8Q76FK4 1167 aaKnown RBP20.15■□□□□ 0.82
SLK-201ENST00000335753 CSRNP3Q8WYN3 585 aa20.15■□□□□ 0.82
SLK-201ENST00000335753 CARD11Q9BXL7 1154 aa20.15■□□□□ 0.82
SLK-201ENST00000335753 TRIM6-TRIM34B2RNG4 842 aa20.15■□□□□ 0.82
SLK-201ENST00000335753 SAMD1Q6SPF0 538 aaPredicted RBP20.15■□□□□ 0.82
SLK-201ENST00000335753 CCDC34Q96HJ3 373 aa20.15■□□□□ 0.82
SLK-201ENST00000335753 STK26Q9P289 416 aa20.13■□□□□ 0.81
SLK-201ENST00000335753 MS4A1P11836 297 aa20.12■□□□□ 0.81
SLK-201ENST00000335753 RRP12Q5JTH9 1297 aaKnown RBP20.12■□□□□ 0.81
SLK-201ENST00000335753 HTATSF1O43719 755 aaKnown RBP20.11■□□□□ 0.81
SLK-201ENST00000335753 PTMSP20962 102 aa20.11■□□□□ 0.81
SLK-201ENST00000335753 NOP58Q9Y2X3 529 aaKnown RBP20.11■□□□□ 0.81
SLK-201ENST00000335753 MIER1Q8N108 512 aa20.1■□□□□ 0.81
SLK-201ENST00000335753 TRIM34Q9BYJ4 488 aa20.1■□□□□ 0.81
SLK-201ENST00000335753 TSR1Q2NL82 804 aaKnown RBP20.08■□□□□ 0.81
SLK-201ENST00000335753 FBXW7Q969H0 707 aa20.08■□□□□ 0.81
SLK-201ENST00000335753 VSIG10Q8N0Z9 540 aa20.07■□□□□ 0.8
SLK-201ENST00000335753 FOXD4L5Q5VV16 416 aaPredicted RBP20.06■□□□□ 0.8
SLK-201ENST00000335753 PAF1Q8N7H5 531 aa20.06■□□□□ 0.8
SLK-201ENST00000335753 FOXD4L4Q8WXT5 416 aaPredicted RBP20.06■□□□□ 0.8
SLK-201ENST00000335753 GPATCH3Q96I76 525 aa20.06■□□□□ 0.8
SLK-201ENST00000335753 USP35Q9P2H5 1018 aa20.05■□□□□ 0.8
SLK-201ENST00000335753 SF3A1Q15459 793 aaKnown RBP20.05■□□□□ 0.8
SLK-201ENST00000335753 FOXD4L1Q9NU39 408 aa20.03■□□□□ 0.8
SLK-201ENST00000335753 PLEKHD1A6NEE1 506 aa20.03■□□□□ 0.8
SLK-201ENST00000335753 PCMTD1Q96MG8 357 aaPredicted RBP20.03■□□□□ 0.8
SLK-201ENST00000335753 SCRIBQ14160 1630 aa20.03■□□□□ 0.8
SLK-201ENST00000335753 KAT6BQ8WYB5 2073 aa20■□□□□ 0.79
SLK-201ENST00000335753 SYAP1Q96A49 352 aaPredicted RBP20■□□□□ 0.79
SLK-201ENST00000335753 DCAF8L1A6NGE4 600 aa20■□□□□ 0.79
SLK-201ENST00000335753 SLC4A10Q6U841 1118 aa19.99■□□□□ 0.79
SLK-201ENST00000335753 SLKQ9H2G2 1235 aaPredicted RBP19.99■□□□□ 0.79
SLK-201ENST00000335753 GBP4Q96PP9 640 aa19.98■□□□□ 0.79
SLK-201ENST00000335753 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.97■□□□□ 0.79
SLK-201ENST00000335753 FOXD4L6Q3SYB3 417 aaPredicted RBP19.97■□□□□ 0.79
SLK-201ENST00000335753 FOXD4L3Q6VB84 417 aaPredicted RBP19.97■□□□□ 0.79
SLK-201ENST00000335753 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.96■□□□□ 0.79
SLK-201ENST00000335753 TPM2P07951 284 aa19.96■□□□□ 0.79
SLK-201ENST00000335753 ITPRIPQ8IWB1 547 aa19.96■□□□□ 0.79
SLK-201ENST00000335753 MORC1Q86VD1 984 aa19.96■□□□□ 0.79
SLK-201ENST00000335753 HDGFP51858 240 aaKnown RBP19.96■□□□□ 0.79
SLK-201ENST00000335753 ODF2Q5BJF6 829 aa19.96■□□□□ 0.79
SLK-201ENST00000335753 AKAP17AQ02040 695 aaKnown RBP19.95■□□□□ 0.78
SLK-201ENST00000335753 LTV1Q96GA3 475 aaPredicted RBP19.94■□□□□ 0.78
SLK-201ENST00000335753 CCDC43Q96MW1 224 aaKnown RBP19.94■□□□□ 0.78
SLK-201ENST00000335753 ZFYVE27Q5T4F4 411 aa19.94■□□□□ 0.78
SLK-201ENST00000335753 BCL11BQ9C0K0 894 aaPredicted RBP19.94■□□□□ 0.78
SLK-201ENST00000335753 DHX16O60231 1041 aaKnown RBP19.93■□□□□ 0.78
SLK-201ENST00000335753 MEX3CQ5U5Q3 659 aaKnown RBP19.93■□□□□ 0.78
SLK-201ENST00000335753 H3BQV1 296 aa19.92■□□□□ 0.78
SLK-201ENST00000335753 IFFO2Q5TF58 517 aa19.92■□□□□ 0.78
SLK-201ENST00000335753 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
SLK-201ENST00000335753 CFAP44Q96MT7 982 aa19.91■□□□□ 0.78
SLK-201ENST00000335753 CCDC70Q6NSX1 233 aa19.91■□□□□ 0.78
SLK-201ENST00000335753 CT47A1Q5JQC4 288 aaPredicted RBP19.9■□□□□ 0.78
SLK-201ENST00000335753 EVA1CP58658 441 aa19.89■□□□□ 0.77
SLK-201ENST00000335753 NOL10Q9BSC4 688 aaKnown RBP19.89■□□□□ 0.77
SLK-201ENST00000335753 APPP05067 770 aa19.89■□□□□ 0.77
SLK-201ENST00000335753 NGEFQ8N5V2 710 aa19.88■□□□□ 0.77
SLK-201ENST00000335753 MFAP1P55081 439 aaKnown RBP19.88■□□□□ 0.77
SLK-201ENST00000335753 R3HCC1Q9Y3T6 440 aaKnown RBP19.87■□□□□ 0.77
SLK-201ENST00000335753 CSPP1Q1MSJ5 1256 aa19.87■□□□□ 0.77
SLK-201ENST00000335753 CFDP1Q9UEE9 299 aaPredicted RBP19.87■□□□□ 0.77
SLK-201ENST00000335753 SPAG9O60271 1321 aaKnown RBP19.87■□□□□ 0.77
SLK-201ENST00000335753 KIF16BQ96L93 1317 aa19.87■□□□□ 0.77
SLK-201ENST00000335753 TPM1P09493 284 aa19.87■□□□□ 0.77
SLK-201ENST00000335753 STK31Q9BXU1 1019 aa19.86■□□□□ 0.77
SLK-201ENST00000335753 ZNF592Q92610 1267 aa19.86■□□□□ 0.77
SLK-201ENST00000335753 MCTP1Q6DN14 999 aa19.86■□□□□ 0.77
SLK-201ENST00000335753 DEKP35659 375 aaKnown RBP19.86■□□□□ 0.77
SLK-201ENST00000335753 NAP1L1P55209 391 aaKnown RBP19.86■□□□□ 0.77
SLK-201ENST00000335753 NUTM2FA1L443 756 aa19.85■□□□□ 0.77
SLK-201ENST00000335753 IPO8O15397 1037 aaKnown RBP19.85■□□□□ 0.77
SLK-201ENST00000335753 PPM1FP49593 454 aaPredicted RBP19.85■□□□□ 0.77
SLK-201ENST00000335753 AMOTL1Q8IY63 956 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms