RNA–Protein interactions for RNA: ENST00000334983.9

CMTM7-201, Transcript of CKLF like MARVEL transmembrane domain containing 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM7, Length 2,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM7-201ENST00000334983 MAGI3Q5TCQ9 1506 aa27.4■■□□□ 1.98
CMTM7-201ENST00000334983 TCOF1Q13428 1488 aaKnown RBP27.4■■□□□ 1.98
CMTM7-201ENST00000334983 SIN3AQ96ST3 1273 aa27.39■■□□□ 1.98
CMTM7-201ENST00000334983 NAIPQ13075 1403 aa27.37■■□□□ 1.97
CMTM7-201ENST00000334983 ASXL2Q76L83 1435 aa27.37■■□□□ 1.97
CMTM7-201ENST00000334983 MIA2Q96PC5 1412 aa27.33■■□□□ 1.97
CMTM7-201ENST00000334983 PPP1R15AO75807 674 aaPredicted RBP27.31■■□□□ 1.96
CMTM7-201ENST00000334983 PLEKHD1A6NEE1 506 aa27.31■■□□□ 1.96
CMTM7-201ENST00000334983 AKNAQ7Z591 1439 aa27.31■■□□□ 1.96
CMTM7-201ENST00000334983 WDR7Q9Y4E6 1490 aa27.29■■□□□ 1.96
CMTM7-201ENST00000334983 CDK11AQ9UQ88 783 aaPredicted RBP27.29■■□□□ 1.96
CMTM7-201ENST00000334983 KCNH8Q96L42 1107 aa27.25■■□□□ 1.95
CMTM7-201ENST00000334983 GCC2Q8IWJ2 1684 aa27.23■■□□□ 1.95
CMTM7-201ENST00000334983 TONSLQ96HA7 1378 aa27.21■■□□□ 1.95
CMTM7-201ENST00000334983 TROQ12816 1431 aaPredicted RBP27.2■■□□□ 1.95
CMTM7-201ENST00000334983 ABCC10Q5T3U5 1492 aa27.2■■□□□ 1.94
CMTM7-201ENST00000334983 FAM69CQ0P6D2 419 aa27.17■■□□□ 1.94
CMTM7-201ENST00000334983 TRHP20396 242 aaPredicted RBP27.15■■□□□ 1.94
CMTM7-201ENST00000334983 DIP2BQ9P265 1576 aa27.15■■□□□ 1.94
CMTM7-201ENST00000334983 KIF14Q15058 1648 aa27.1■■□□□ 1.93
CMTM7-201ENST00000334983 GLI2P10070 1586 aa27.09■■□□□ 1.93
CMTM7-201ENST00000334983 ROCK1Q13464 1354 aa27.08■■□□□ 1.93
CMTM7-201ENST00000334983 KIF13AQ9H1H9 1805 aa27.07■■□□□ 1.92
CMTM7-201ENST00000334983 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.06■■□□□ 1.92
CMTM7-201ENST00000334983 RRP7BPQ9NSQ0 103 aa27.06■■□□□ 1.92
CMTM7-201ENST00000334983 DDX10Q13206 875 aaKnown RBP27.04■■□□□ 1.92
CMTM7-201ENST00000334983 ABCA9Q8IUA7 1624 aa27.03■■□□□ 1.92
CMTM7-201ENST00000334983 TTC37Q6PGP7 1564 aa27.02■■□□□ 1.92
CMTM7-201ENST00000334983 CHIC2Q9UKJ5 165 aa27.02■■□□□ 1.92
CMTM7-201ENST00000334983 DAPK1P53355 1430 aa27.02■■□□□ 1.92
CMTM7-201ENST00000334983 DNMT1P26358 1616 aaKnown RBP27.02■■□□□ 1.92
CMTM7-201ENST00000334983 DENND4BO75064 1496 aaPredicted RBP27.01■■□□□ 1.91
CMTM7-201ENST00000334983 CD109Q6YHK3 1445 aa27■■□□□ 1.91
CMTM7-201ENST00000334983 MAP3K4Q9Y6R4 1608 aa26.98■■□□□ 1.91
CMTM7-201ENST00000334983 KDM6BO15054 1643 aa26.97■■□□□ 1.91
CMTM7-201ENST00000334983 ABCC5O15440 1437 aa26.96■■□□□ 1.91
CMTM7-201ENST00000334983 TRIM52Q96A61 297 aa26.94■■□□□ 1.9
CMTM7-201ENST00000334983 MPHOSPH9Q99550 1183 aa26.94■■□□□ 1.9
CMTM7-201ENST00000334983 CCER2I3L3R5 266 aa26.94■■□□□ 1.9
CMTM7-201ENST00000334983 PLCH2O75038 1416 aa26.92■■□□□ 1.9
CMTM7-201ENST00000334983 GPATCH8Q9UKJ3 1502 aaKnown RBP26.92■■□□□ 1.9
CMTM7-201ENST00000334983 ITSN2Q9NZM3 1697 aa26.91■■□□□ 1.9
CMTM7-201ENST00000334983 TSPOAP1O95153 1857 aa26.89■■□□□ 1.9
CMTM7-201ENST00000334983 PPRC1Q5VV67 1664 aaKnown RBP26.87■■□□□ 1.89
CMTM7-201ENST00000334983 ANP32CO43423 234 aa26.87■■□□□ 1.89
CMTM7-201ENST00000334983 MYO5CQ9NQX4 1742 aa26.87■■□□□ 1.89
CMTM7-201ENST00000334983 HIRIP3Q9BW71 556 aaPredicted RBP26.85■■□□□ 1.89
CMTM7-201ENST00000334983 CDC42BPAQ5VT25 1732 aa26.85■■□□□ 1.89
CMTM7-201ENST00000334983 CFDP1Q9UEE9 299 aaPredicted RBP26.84■■□□□ 1.89
CMTM7-201ENST00000334983 PREX2Q70Z35 1606 aa26.84■■□□□ 1.89
CMTM7-201ENST00000334983 FANCAO15360 1455 aa26.83■■□□□ 1.89
CMTM7-201ENST00000334983 CAMSAP2Q08AD1 1489 aa26.83■■□□□ 1.89
CMTM7-201ENST00000334983 ARHGAP5Q13017 1502 aa26.83■■□□□ 1.88
CMTM7-201ENST00000334983 ARAP3Q8WWN8 1544 aa26.83■■□□□ 1.88
CMTM7-201ENST00000334983 EFCAB2Q5VUJ9 269 aa26.82■■□□□ 1.88
CMTM7-201ENST00000334983 ZNF644Q9H582 1327 aaPredicted RBP26.82■■□□□ 1.88
CMTM7-201ENST00000334983 ANKRD30BQ9BXX2 1392 aa26.82■■□□□ 1.88
CMTM7-201ENST00000334983 CDC42BPBQ9Y5S2 1711 aa26.82■■□□□ 1.88
CMTM7-201ENST00000334983 TEX14Q8IWB6 1497 aa26.82■■□□□ 1.88
CMTM7-201ENST00000334983 ADGRL2O95490 1459 aa26.79■■□□□ 1.88
CMTM7-201ENST00000334983 RPRD2Q5VT52 1461 aaKnown RBP26.79■■□□□ 1.88
CMTM7-201ENST00000334983 ZNF777Q9ULD5 760 aaPredicted RBP26.78■■□□□ 1.88
CMTM7-201ENST00000334983 ADGBQ8N7X0 1667 aa26.78■■□□□ 1.88
CMTM7-201ENST00000334983 NCOA1Q15788 1441 aa26.76■■□□□ 1.88
CMTM7-201ENST00000334983 NEO1Q92859 1461 aa26.76■■□□□ 1.87
CMTM7-201ENST00000334983 SUPT16HQ9Y5B9 1047 aaKnown RBP26.75■■□□□ 1.87
CMTM7-201ENST00000334983 L3MBTL2Q969R5 705 aa26.73■■□□□ 1.87
CMTM7-201ENST00000334983 CROCC2H7BZ55 1655 aa26.73■■□□□ 1.87
CMTM7-201ENST00000334983 EIF4G2P78344 907 aaKnown RBP eCLIP26.72■■□□□ 1.87
CMTM7-201ENST00000334983 CFAP74Q9C0B2 1584 aa26.7■■□□□ 1.87
CMTM7-201ENST00000334983 SAMD9LQ8IVG5 1584 aa26.7■■□□□ 1.86
CMTM7-201ENST00000334983 HSPA5P11021 654 aaKnown RBP26.7■■□□□ 1.86
CMTM7-201ENST00000334983 SLC4A1APQ9BWU0 796 aaKnown RBP26.7■■□□□ 1.86
CMTM7-201ENST00000334983 ADGRL1O94910 1474 aa26.68■■□□□ 1.86
CMTM7-201ENST00000334983 ANKRD30AQ9BXX3 1397 aa26.68■■□□□ 1.86
CMTM7-201ENST00000334983 PZPP20742 1482 aa26.67■■□□□ 1.86
CMTM7-201ENST00000334983 COL17A1Q9UMD9 1497 aaPredicted RBP26.67■■□□□ 1.86
CMTM7-201ENST00000334983 SCAPERQ9BY12 1400 aa26.66■■□□□ 1.86
CMTM7-201ENST00000334983 SHANK2Q9UPX8 1470 aa26.66■■□□□ 1.86
CMTM7-201ENST00000334983 FOXD1Q16676 465 aa26.65■■□□□ 1.86
CMTM7-201ENST00000334983 ARHGEF12Q9NZN5 1544 aa26.65■■□□□ 1.86
CMTM7-201ENST00000334983 HNRNPMP52272 730 aaKnown RBP eCLIP26.65■■□□□ 1.86
CMTM7-201ENST00000334983 ABCC1P33527 1531 aa26.64■■□□□ 1.86
CMTM7-201ENST00000334983 WASHC2AQ641Q2 1341 aa26.64■■□□□ 1.86
CMTM7-201ENST00000334983 KIAA1107Q9UPP5 1409 aa26.63■■□□□ 1.85
CMTM7-201ENST00000334983 RAPGEF3O95398 923 aa26.62■■□□□ 1.85
CMTM7-201ENST00000334983 PLEKHH2Q8IVE3 1493 aa26.62■■□□□ 1.85
CMTM7-201ENST00000334983 SYCP2Q9BX26 1530 aa26.62■■□□□ 1.85
CMTM7-201ENST00000334983 MBD5Q9P267 1494 aa26.59■■□□□ 1.85
CMTM7-201ENST00000334983 TRAPPC8Q9Y2L5 1435 aa26.58■■□□□ 1.85
CMTM7-201ENST00000334983 AFAP1Q8N556 730 aa26.58■■□□□ 1.85
CMTM7-201ENST00000334983 ANKRD50Q9ULJ7 1429 aa26.57■■□□□ 1.84
CMTM7-201ENST00000334983 POGZQ7Z3K3 1410 aa26.57■■□□□ 1.84
CMTM7-201ENST00000334983 CNTLNQ9NXG0 1405 aa26.55■■□□□ 1.84
CMTM7-201ENST00000334983 SPATA31E1Q6ZUB1 1445 aa26.54■■□□□ 1.84
CMTM7-201ENST00000334983 NBPF8Q3BBV2 869 aa26.54■■□□□ 1.84
CMTM7-201ENST00000334983 ARHGEF5Q12774 1597 aa26.54■■□□□ 1.84
CMTM7-201ENST00000334983 C9orf84Q5VXU9 1444 aa26.53■■□□□ 1.84
CMTM7-201ENST00000334983 FRMPD1Q5SYB0 1578 aa26.52■■□□□ 1.84
CMTM7-201ENST00000334983 ZNF518AQ6AHZ1 1483 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms