RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 SNAPC4Q5SXM2 1469 aa14.91□□□□□ -0.02
POLR1B-202ENST00000333990 CASKIN1Q8WXD9 1431 aa14.91□□□□□ -0.02
POLR1B-202ENST00000333990 EID1Q9Y6B2 187 aa14.91□□□□□ -0.02
POLR1B-202ENST00000333990 PRXQ9BXM0 1461 aa14.91□□□□□ -0.02
POLR1B-202ENST00000333990 ABCA10Q8WWZ4 1543 aa14.9□□□□□ -0.02
POLR1B-202ENST00000333990 EFCAB5A4FU69 1503 aa14.9□□□□□ -0.02
POLR1B-202ENST00000333990 BCL11AQ9H165 835 aa14.89□□□□□ -0.03
POLR1B-202ENST00000333990 LMOD2Q6P5Q4 547 aa14.89□□□□□ -0.03
POLR1B-202ENST00000333990 PLEKHG5O94827 1062 aa14.89□□□□□ -0.03
POLR1B-202ENST00000333990 SRPK2P78362 688 aaKnown RBP14.89□□□□□ -0.03
POLR1B-202ENST00000333990 FOXD1Q16676 465 aa14.87□□□□□ -0.03
POLR1B-202ENST00000333990 PPM1GO15355 546 aaPredicted RBP14.87□□□□□ -0.03
POLR1B-202ENST00000333990 PRDM2Q13029 1718 aa14.86□□□□□ -0.03
POLR1B-202ENST00000333990 MIER1Q8N108 512 aa14.86□□□□□ -0.03
POLR1B-202ENST00000333990 A0A0G2JS52 829 aa14.85□□□□□ -0.03
POLR1B-202ENST00000333990 KIAA0586Q9BVV6 1533 aa14.84□□□□□ -0.03
POLR1B-202ENST00000333990 EIF3AQ14152 1382 aaKnown RBP14.84□□□□□ -0.03
POLR1B-202ENST00000333990 FYCO1Q9BQS8 1478 aa14.84□□□□□ -0.03
POLR1B-202ENST00000333990 MAPK8IP3Q9UPT6 1336 aa14.83□□□□□ -0.03
POLR1B-202ENST00000333990 PNNQ9H307 717 aaKnown RBP14.83□□□□□ -0.04
POLR1B-202ENST00000333990 UACAQ9BZF9 1416 aa14.83□□□□□ -0.04
POLR1B-202ENST00000333990 ROCK2O75116 1388 aaKnown RBP14.83□□□□□ -0.04
POLR1B-202ENST00000333990 STK26Q9P289 416 aa14.83□□□□□ -0.04
POLR1B-202ENST00000333990 FGD6Q6ZV73 1430 aa14.82□□□□□ -0.04
POLR1B-202ENST00000333990 HDGFL2Q7Z4V5 671 aaPredicted RBP14.82□□□□□ -0.04
POLR1B-202ENST00000333990 CCDC144AA2RUR9 1427 aa14.81□□□□□ -0.04
POLR1B-202ENST00000333990 RTL5Q5HYW3 569 aaPredicted RBP14.81□□□□□ -0.04
POLR1B-202ENST00000333990 LRRC9Q6ZRR7 1453 aa14.81□□□□□ -0.04
POLR1B-202ENST00000333990 MAGI1Q96QZ7 1491 aaPredicted RBP14.8□□□□□ -0.04
POLR1B-202ENST00000333990 SAFB2Q14151 953 aaKnown RBP eCLIP14.8□□□□□ -0.04
POLR1B-202ENST00000333990 FKBP8Q14318 412 aa14.79□□□□□ -0.04
POLR1B-202ENST00000333990 HSPA5P11021 654 aaKnown RBP14.78□□□□□ -0.04
POLR1B-202ENST00000333990 VGFO15240 615 aaPredicted RBP14.78□□□□□ -0.04
POLR1B-202ENST00000333990 L3MBTL2Q969R5 705 aa14.78□□□□□ -0.04
POLR1B-202ENST00000333990 MYH16Q9H6N6 1097 aa14.76□□□□□ -0.05
POLR1B-202ENST00000333990 KIF15Q9NS87 1388 aa14.76□□□□□ -0.05
POLR1B-202ENST00000333990 NCOA2Q15596 1464 aa14.76□□□□□ -0.05
POLR1B-202ENST00000333990 ARAP1Q96P48 1450 aa14.76□□□□□ -0.05
POLR1B-202ENST00000333990 MORC1Q86VD1 984 aa14.75□□□□□ -0.05
POLR1B-202ENST00000333990 CUL7Q14999 1698 aa14.75□□□□□ -0.05
POLR1B-202ENST00000333990 CCDC136Q96JN2 1154 aa14.75□□□□□ -0.05
POLR1B-202ENST00000333990 CC2D1BQ5T0F9 858 aaKnown RBP14.75□□□□□ -0.05
POLR1B-202ENST00000333990 UPF2Q9HAU5 1272 aaKnown RBP14.74□□□□□ -0.05
POLR1B-202ENST00000333990 URB2Q14146 1524 aaKnown RBP14.74□□□□□ -0.05
POLR1B-202ENST00000333990 STAC3Q96MF2 364 aa14.74□□□□□ -0.05
POLR1B-202ENST00000333990 TROQ12816 1431 aaPredicted RBP14.74□□□□□ -0.05
POLR1B-202ENST00000333990 PLEKHH2Q8IVE3 1493 aa14.74□□□□□ -0.05
POLR1B-202ENST00000333990 TNNT2P45379 298 aaPredicted RBP14.73□□□□□ -0.05
POLR1B-202ENST00000333990 ARHGAP5Q13017 1502 aa14.73□□□□□ -0.05
POLR1B-202ENST00000333990 U2SURPO15042 1029 aaKnown RBP14.73□□□□□ -0.05
POLR1B-202ENST00000333990 TERF2IPQ9NYB0 399 aa14.72□□□□□ -0.05
POLR1B-202ENST00000333990 IQGAP2Q13576 1575 aa14.72□□□□□ -0.05
POLR1B-202ENST00000333990 ZNF644Q9H582 1327 aaPredicted RBP14.71□□□□□ -0.05
POLR1B-202ENST00000333990 PHLDB1Q86UU1 1377 aa14.71□□□□□ -0.05
POLR1B-202ENST00000333990 GRIN2AQ12879 1464 aa14.71□□□□□ -0.05
POLR1B-202ENST00000333990 HECW1Q76N89 1606 aa14.71□□□□□ -0.06
POLR1B-202ENST00000333990 ANKRD50Q9ULJ7 1429 aa14.7□□□□□ -0.06
POLR1B-202ENST00000333990 ANP32AP39687 249 aaKnown RBP14.7□□□□□ -0.06
POLR1B-202ENST00000333990 EHBP1L1Q8N3D4 1523 aa14.7□□□□□ -0.06
POLR1B-202ENST00000333990 KTN1Q86UP2 1357 aaKnown RBP14.7□□□□□ -0.06
POLR1B-202ENST00000333990 MIA2Q96PC5 1412 aa14.69□□□□□ -0.06
POLR1B-202ENST00000333990 NEUROD2Q15784 382 aa14.68□□□□□ -0.06
POLR1B-202ENST00000333990 DHX57Q6P158 1386 aaKnown RBP14.68□□□□□ -0.06
POLR1B-202ENST00000333990 AFAP1Q8N556 730 aa14.67□□□□□ -0.06
POLR1B-202ENST00000333990 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.67□□□□□ -0.06
POLR1B-202ENST00000333990 CCER2I3L3R5 266 aa14.66□□□□□ -0.06
POLR1B-202ENST00000333990 PAK3O75914 559 aaPredicted RBP14.65□□□□□ -0.06
POLR1B-202ENST00000333990 RALBP1Q15311 655 aa14.65□□□□□ -0.06
POLR1B-202ENST00000333990 SOX12O15370 315 aa14.64□□□□□ -0.07
POLR1B-202ENST00000333990 MYT1Q01538 1121 aa14.64□□□□□ -0.07
POLR1B-202ENST00000333990 NUTM2DQ5VT03 806 aaPredicted RBP14.64□□□□□ -0.07
POLR1B-202ENST00000333990 CHMP4BQ9H444 224 aaKnown RBP14.64□□□□□ -0.07
POLR1B-202ENST00000333990 NGDNQ8NEJ9 315 aaKnown RBP14.64□□□□□ -0.07
POLR1B-202ENST00000333990 BIVM-ERCC5R4GMW8 1640 aa14.63□□□□□ -0.07
POLR1B-202ENST00000333990 MS4A1P11836 297 aa14.63□□□□□ -0.07
POLR1B-202ENST00000333990 TRAK1Q9UPV9 953 aa14.63□□□□□ -0.07
POLR1B-202ENST00000333990 LAS1LQ9Y4W2 734 aaKnown RBP14.63□□□□□ -0.07
POLR1B-202ENST00000333990 ZNF608Q9ULD9 1512 aaPredicted RBP14.61□□□□□ -0.07
POLR1B-202ENST00000333990 FTSJ3Q8IY81 847 aaKnown RBP14.61□□□□□ -0.07
POLR1B-202ENST00000333990 ARXQ96QS3 562 aa14.6□□□□□ -0.07
POLR1B-202ENST00000333990 EPRSP07814 1512 aaKnown RBP14.59□□□□□ -0.07
POLR1B-202ENST00000333990 HSP90AA1P07900 732 aaKnown RBP14.59□□□□□ -0.07
POLR1B-202ENST00000333990 RTF1Q92541 710 aaKnown RBP14.59□□□□□ -0.07
POLR1B-202ENST00000333990 EVC2Q86UK5 1308 aa14.59□□□□□ -0.07
POLR1B-202ENST00000333990 TIAM1Q13009 1591 aa14.58□□□□□ -0.08
POLR1B-202ENST00000333990 RRBP1Q9P2E9 1410 aaKnown RBP14.58□□□□□ -0.08
POLR1B-202ENST00000333990 CALD1Q05682 793 aaKnown RBP14.58□□□□□ -0.08
POLR1B-202ENST00000333990 C9orf84Q5VXU9 1444 aa14.57□□□□□ -0.08
POLR1B-202ENST00000333990 CHMP4AQ9BY43 222 aa14.57□□□□□ -0.08
POLR1B-202ENST00000333990 CSB-PGBD3P0DP91 1061 aa14.57□□□□□ -0.08
POLR1B-202ENST00000333990 SCAPERQ9BY12 1400 aa14.57□□□□□ -0.08
POLR1B-202ENST00000333990 ST20-MTHFSA0A0A6YYL1 179 aa14.56□□□□□ -0.08
POLR1B-202ENST00000333990 U2AF1L5P0DN76 240 aaPredicted RBP14.55□□□□□ -0.08
POLR1B-202ENST00000333990 U2AF1Q01081 240 aaKnown RBP eCLIP14.55□□□□□ -0.08
POLR1B-202ENST00000333990 POGZQ7Z3K3 1410 aa14.54□□□□□ -0.08
POLR1B-202ENST00000333990 SUPT6HQ7KZ85 1726 aaKnown RBP14.54□□□□□ -0.08
POLR1B-202ENST00000333990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.53□□□□□ -0.08
POLR1B-202ENST00000333990 HFM1A2PYH4 1435 aa14.53□□□□□ -0.08
POLR1B-202ENST00000333990 NLRP13Q86W25 1043 aa14.53□□□□□ -0.08
POLR1B-202ENST00000333990 EIF5BO60841 1220 aaKnown RBP14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms