RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 TAF7LQ5H9L4 462 aa13.01□□□□□ -0.33
SPTBN1-201ENST00000333896 HOMEZQ8IX15 550 aa13.01□□□□□ -0.33
SPTBN1-201ENST00000333896 P3H3Q8IVL6 736 aa13□□□□□ -0.33
SPTBN1-201ENST00000333896 KDM2AQ9Y2K7 1162 aa13□□□□□ -0.33
SPTBN1-201ENST00000333896 NEFHP12036 1026 aa12.99□□□□□ -0.33
SPTBN1-201ENST00000333896 B4GALNT3Q6L9W6 998 aa12.99□□□□□ -0.33
SPTBN1-201ENST00000333896 TSPYL1Q9H0U9 437 aa12.99□□□□□ -0.33
SPTBN1-201ENST00000333896 ISY1Q9ULR0 285 aaKnown RBP12.98□□□□□ -0.33
SPTBN1-201ENST00000333896 ANO8Q9HCE9 1232 aaPredicted RBP12.98□□□□□ -0.33
SPTBN1-201ENST00000333896 MCCP23508 829 aa12.97□□□□□ -0.33
SPTBN1-201ENST00000333896 HIRIP3Q9BW71 556 aaPredicted RBP12.97□□□□□ -0.33
SPTBN1-201ENST00000333896 TIMELESSQ9UNS1 1208 aa12.97□□□□□ -0.33
SPTBN1-201ENST00000333896 TPM4P67936 248 aa12.96□□□□□ -0.33
SPTBN1-201ENST00000333896 RRP12Q5JTH9 1297 aaKnown RBP12.96□□□□□ -0.33
SPTBN1-201ENST00000333896 MYO15BQ96JP2 1530 aa12.96□□□□□ -0.33
SPTBN1-201ENST00000333896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.96□□□□□ -0.348e-13■■□□□ 13.8
SPTBN1-201ENST00000333896 SENP3Q9H4L4 574 aaPredicted RBP12.95□□□□□ -0.34
SPTBN1-201ENST00000333896 FRAT1Q92837 279 aaPredicted RBP12.93□□□□□ -0.34
SPTBN1-201ENST00000333896 CREBRFQ8IUR6 639 aa12.92□□□□□ -0.34
SPTBN1-201ENST00000333896 CEP89Q96ST8 783 aa12.9□□□□□ -0.34
SPTBN1-201ENST00000333896 CALD1Q05682 793 aaKnown RBP12.9□□□□□ -0.34
SPTBN1-201ENST00000333896 HMGN5P82970 282 aaKnown RBP12.89□□□□□ -0.35
SPTBN1-201ENST00000333896 FAM13BQ9NYF5 915 aa12.89□□□□□ -0.35
SPTBN1-201ENST00000333896 NEUROD2Q15784 382 aa12.88□□□□□ -0.35
SPTBN1-201ENST00000333896 HAP1P54257 671 aaPredicted RBP12.88□□□□□ -0.35
SPTBN1-201ENST00000333896 CFAP53Q96M91 514 aa12.88□□□□□ -0.35
SPTBN1-201ENST00000333896 CCAR2Q8N163 923 aaKnown RBP12.87□□□□□ -0.35
SPTBN1-201ENST00000333896 TPM3P06753 285 aa12.87□□□□□ -0.35
SPTBN1-201ENST00000333896 KIF16BQ96L93 1317 aa12.87□□□□□ -0.35
SPTBN1-201ENST00000333896 HSP90B1P14625 803 aaKnown RBP12.87□□□□□ -0.35
SPTBN1-201ENST00000333896 DIAPH3Q9NSV4 1193 aa12.86□□□□□ -0.35
SPTBN1-201ENST00000333896 GOLGA3Q08378 1498 aa12.85□□□□□ -0.35
SPTBN1-201ENST00000333896 CDCA8Q53HL2 280 aa12.85□□□□□ -0.35
SPTBN1-201ENST00000333896 MEX3CQ5U5Q3 659 aaKnown RBP12.85□□□□□ -0.35
SPTBN1-201ENST00000333896 ARGLU1Q9NWB6 273 aaPredicted RBP12.85□□□□□ -0.35
SPTBN1-201ENST00000333896 RDXP35241 583 aaKnown RBP12.84□□□□□ -0.35
SPTBN1-201ENST00000333896 USP8P40818 1118 aa12.84□□□□□ -0.35
SPTBN1-201ENST00000333896 KIAA1211Q6ZU35 1233 aa12.83□□□□□ -0.36
SPTBN1-201ENST00000333896 SLKQ9H2G2 1235 aaPredicted RBP12.83□□□□□ -0.36
SPTBN1-201ENST00000333896 MAPK8IP3Q9UPT6 1336 aa12.83□□□□□ -0.36
SPTBN1-201ENST00000333896 PHLDB1Q86UU1 1377 aa12.82□□□□□ -0.36
SPTBN1-201ENST00000333896 CCDC70Q6NSX1 233 aa12.82□□□□□ -0.36
SPTBN1-201ENST00000333896 ACBD3Q9H3P7 528 aa12.82□□□□□ -0.36
SPTBN1-201ENST00000333896 CLIP1P30622 1438 aa12.82□□□□□ -0.36
SPTBN1-201ENST00000333896 CHIC2Q9UKJ5 165 aa12.81□□□□□ -0.36
SPTBN1-201ENST00000333896 KNSTRNQ9Y448 316 aa12.81□□□□□ -0.36
SPTBN1-201ENST00000333896 CEP162Q5TB80 1403 aa12.81□□□□□ -0.36
SPTBN1-201ENST00000333896 MRE11P49959 708 aa12.81□□□□□ -0.36
SPTBN1-201ENST00000333896 CCDC34Q96HJ3 373 aa12.8□□□□□ -0.36
SPTBN1-201ENST00000333896 PES1O00541 588 aaKnown RBP12.8□□□□□ -0.36
SPTBN1-201ENST00000333896 DEF6Q9H4E7 631 aa12.79□□□□□ -0.36
SPTBN1-201ENST00000333896 RASSF8Q8NHQ8 419 aa12.78□□□□□ -0.36
SPTBN1-201ENST00000333896 PDCL3Q9H2J4 239 aa12.78□□□□□ -0.36
SPTBN1-201ENST00000333896 TSR1Q2NL82 804 aaKnown RBP12.77□□□□□ -0.37
SPTBN1-201ENST00000333896 CCDC39Q9UFE4 941 aa12.77□□□□□ -0.37
SPTBN1-201ENST00000333896 KRI1Q8N9T8 703 aaKnown RBP12.76□□□□□ -0.37
SPTBN1-201ENST00000333896 ATP6V1DQ9Y5K8 247 aa12.76□□□□□ -0.37
SPTBN1-201ENST00000333896 PMFBP1Q8TBY8 1022 aa12.76□□□□□ -0.37
SPTBN1-201ENST00000333896 WWC1Q8IX03 1113 aa12.76□□□□□ -0.37
SPTBN1-201ENST00000333896 ZNF592Q92610 1267 aa12.76□□□□□ -0.37
SPTBN1-201ENST00000333896 FAM161AQ3B820 660 aa12.75□□□□□ -0.37
SPTBN1-201ENST00000333896 AK7Q96M32 723 aa12.74□□□□□ -0.37
SPTBN1-201ENST00000333896 PLCD4Q9BRC7 762 aa12.74□□□□□ -0.37
SPTBN1-201ENST00000333896 TPD52L1Q16890 204 aaPredicted RBP12.74□□□□□ -0.37
SPTBN1-201ENST00000333896 APBB1O00213 710 aa12.74□□□□□ -0.37
SPTBN1-201ENST00000333896 HMMRO75330 724 aa12.74□□□□□ -0.37
SPTBN1-201ENST00000333896 RCAN3Q9UKA8 241 aa12.74□□□□□ -0.37
SPTBN1-201ENST00000333896 PPP1R15AO75807 674 aaPredicted RBP12.74□□□□□ -0.37
SPTBN1-201ENST00000333896 CCDC191Q8NCU4 936 aa12.74□□□□□ -0.37
SPTBN1-201ENST00000333896 HSP90B2PQ58FF3 399 aa12.73□□□□□ -0.37
SPTBN1-201ENST00000333896 CAVIN1Q6NZI2 390 aaKnown RBP12.73□□□□□ -0.37
SPTBN1-201ENST00000333896 PDCL2Q8N4E4 241 aa12.73□□□□□ -0.37
SPTBN1-201ENST00000333896 PDE3BQ13370 1112 aa12.72□□□□□ -0.37
SPTBN1-201ENST00000333896 CENPQQ7L2Z9 268 aaPredicted RBP12.72□□□□□ -0.37
SPTBN1-201ENST00000333896 RSF1Q96T23 1441 aaPredicted RBP12.72□□□□□ -0.37
SPTBN1-201ENST00000333896 RWDD1Q9H446 243 aaPredicted RBP12.72□□□□□ -0.37
SPTBN1-201ENST00000333896 ST18O60284 1047 aa12.72□□□□□ -0.37
SPTBN1-201ENST00000333896 LEKR1Q6ZMV7 388 aa12.72□□□□□ -0.37
SPTBN1-201ENST00000333896 CCDC173Q0VFZ6 552 aa12.71□□□□□ -0.37
SPTBN1-201ENST00000333896 NUDCQ9Y266 331 aa12.71□□□□□ -0.37
SPTBN1-201ENST00000333896 DCTN1Q14203 1278 aa12.71□□□□□ -0.37
SPTBN1-201ENST00000333896 DHX8Q14562 1220 aaKnown RBP12.71□□□□□ -0.38
SPTBN1-201ENST00000333896 KIF3AQ9Y496 699 aa12.71□□□□□ -0.38
SPTBN1-201ENST00000333896 RUFY1Q96T51 708 aa12.7□□□□□ -0.38
SPTBN1-201ENST00000333896 NASPP49321 788 aaPredicted RBP12.7□□□□□ -0.38
SPTBN1-201ENST00000333896 CDR1P51861 262 aa12.7□□□□□ -0.38
SPTBN1-201ENST00000333896 ZBED9Q6R2W3 1325 aa12.69□□□□□ -0.38
SPTBN1-201ENST00000333896 CALCOCO1Q9P1Z2 691 aa12.69□□□□□ -0.38
SPTBN1-201ENST00000333896 GOLGA6L19H0YKK7 550 aa12.69□□□□□ -0.38
SPTBN1-201ENST00000333896 VPS53Q5VIR6 699 aa12.69□□□□□ -0.38
SPTBN1-201ENST00000333896 FOXD4L1Q9NU39 408 aa12.69□□□□□ -0.38
SPTBN1-201ENST00000333896 CC2D1BQ5T0F9 858 aaKnown RBP12.68□□□□□ -0.38
SPTBN1-201ENST00000333896 CEP164Q9UPV0 1460 aa12.68□□□□□ -0.38
SPTBN1-201ENST00000333896 H0YHG0 523 aa12.68□□□□□ -0.38
SPTBN1-201ENST00000333896 U2SURPO15042 1029 aaKnown RBP12.68□□□□□ -0.38
SPTBN1-201ENST00000333896 TPM1P09493 284 aa12.68□□□□□ -0.38
SPTBN1-201ENST00000333896 PDE4AP27815 886 aa12.68□□□□□ -0.38
SPTBN1-201ENST00000333896 HSP90AB3PQ58FF7 597 aa12.68□□□□□ -0.38
SPTBN1-201ENST00000333896 ZMYND15Q9H091 742 aa12.68□□□□□ -0.38
SPTBN1-201ENST00000333896 DNAJC2Q99543 621 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms