RNA–Protein interactions for RNA: ENST00000333703.8

PCDH11Y-202, Transcript of protocadherin 11 Y-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11Y, Length 4,710 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11Y-202ENST00000333703 NUP160Q12769 1436 aa12.89□□□□□ -0.35
PCDH11Y-202ENST00000333703 ANKRD30AQ9BXX3 1397 aa12.89□□□□□ -0.35
PCDH11Y-202ENST00000333703 TIMELESSQ9UNS1 1208 aa12.87□□□□□ -0.35
PCDH11Y-202ENST00000333703 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.87□□□□□ -0.35
PCDH11Y-202ENST00000333703 KDM2AQ9Y2K7 1162 aa12.87□□□□□ -0.35
PCDH11Y-202ENST00000333703 C14orf37Q86TY3 774 aa12.86□□□□□ -0.35
PCDH11Y-202ENST00000333703 EID1Q9Y6B2 187 aa12.86□□□□□ -0.35
PCDH11Y-202ENST00000333703 GGT6Q6P531 493 aa12.84□□□□□ -0.35
PCDH11Y-202ENST00000333703 CD109Q6YHK3 1445 aa12.84□□□□□ -0.35
PCDH11Y-202ENST00000333703 SALL2Q9Y467 1007 aaPredicted RBP12.84□□□□□ -0.35
PCDH11Y-202ENST00000333703 HECW1Q76N89 1606 aa12.84□□□□□ -0.35
PCDH11Y-202ENST00000333703 CASKIN1Q8WXD9 1431 aa12.84□□□□□ -0.35
PCDH11Y-202ENST00000333703 WDR43Q15061 677 aaKnown RBP eCLIP12.83□□□□□ -0.35
PCDH11Y-202ENST00000333703 SIN3AQ96ST3 1273 aa12.82□□□□□ -0.36
PCDH11Y-202ENST00000333703 SLC24A1O60721 1099 aa12.81□□□□□ -0.36
PCDH11Y-202ENST00000333703 UPF2Q9HAU5 1272 aaKnown RBP12.81□□□□□ -0.36
PCDH11Y-202ENST00000333703 FYCO1Q9BQS8 1478 aa12.8□□□□□ -0.36
PCDH11Y-202ENST00000333703 IRX6P78412 446 aaPredicted RBP12.8□□□□□ -0.36
PCDH11Y-202ENST00000333703 TROQ12816 1431 aaPredicted RBP12.8□□□□□ -0.36
PCDH11Y-202ENST00000333703 WASHC2CQ9Y4E1 1318 aa12.8□□□□□ -0.36
PCDH11Y-202ENST00000333703 TARBP1Q13395 1621 aaKnown RBP12.79□□□□□ -0.36
PCDH11Y-202ENST00000333703 PBRM1Q86U86 1689 aa12.79□□□□□ -0.36
PCDH11Y-202ENST00000333703 KIF3BO15066 747 aa12.79□□□□□ -0.36
PCDH11Y-202ENST00000333703 ABCA5Q8WWZ7 1642 aa12.78□□□□□ -0.36
PCDH11Y-202ENST00000333703 RUSC2Q8N2Y8 1516 aa12.78□□□□□ -0.36
PCDH11Y-202ENST00000333703 SETD5Q9C0A6 1442 aa12.77□□□□□ -0.36
PCDH11Y-202ENST00000333703 ARHGAP5Q13017 1502 aa12.77□□□□□ -0.36
PCDH11Y-202ENST00000333703 PPP6R1Q9UPN7 881 aa12.77□□□□□ -0.37
PCDH11Y-202ENST00000333703 AKNAQ7Z591 1439 aa12.77□□□□□ -0.37
PCDH11Y-202ENST00000333703 UGGT2Q9NYU1 1516 aa12.76□□□□□ -0.37
PCDH11Y-202ENST00000333703 DMRT2Q9Y5R5 561 aa12.76□□□□□ -0.37
PCDH11Y-202ENST00000333703 MYOM3Q5VTT5 1437 aa12.75□□□□□ -0.37
PCDH11Y-202ENST00000333703 ARHGEF11O15085 1522 aa12.74□□□□□ -0.37
PCDH11Y-202ENST00000333703 BCL11AQ9H165 835 aa12.74□□□□□ -0.37
PCDH11Y-202ENST00000333703 ABCC2Q92887 1545 aa12.74□□□□□ -0.37
PCDH11Y-202ENST00000333703 KANK4Q5T7N3 995 aaPredicted RBP12.73□□□□□ -0.37
PCDH11Y-202ENST00000333703 CCER2I3L3R5 266 aa12.73□□□□□ -0.37
PCDH11Y-202ENST00000333703 SUPT16HQ9Y5B9 1047 aaKnown RBP12.73□□□□□ -0.37
PCDH11Y-202ENST00000333703 DENND4BO75064 1496 aaPredicted RBP12.73□□□□□ -0.37
PCDH11Y-202ENST00000333703 ASXL2Q76L83 1435 aa12.72□□□□□ -0.37
PCDH11Y-202ENST00000333703 HNRNPMP52272 730 aaKnown RBP eCLIP12.72□□□□□ -0.37
PCDH11Y-202ENST00000333703 CEP170Q5SW79 1584 aa12.72□□□□□ -0.37
PCDH11Y-202ENST00000333703 CARD11Q9BXL7 1154 aa12.72□□□□□ -0.37
PCDH11Y-202ENST00000333703 CDCA8Q53HL2 280 aa12.71□□□□□ -0.37
PCDH11Y-202ENST00000333703 WDR7Q9Y4E6 1490 aa12.71□□□□□ -0.37
PCDH11Y-202ENST00000333703 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.71□□□□□ -0.38
PCDH11Y-202ENST00000333703 EHBP1L1Q8N3D4 1523 aa12.7□□□□□ -0.38
PCDH11Y-202ENST00000333703 HSP90AA1P07900 732 aaKnown RBP12.69□□□□□ -0.38
PCDH11Y-202ENST00000333703 RGL3Q3MIN7 710 aa12.69□□□□□ -0.38
PCDH11Y-202ENST00000333703 PPP4R2Q9NY27 417 aa12.69□□□□□ -0.38
PCDH11Y-202ENST00000333703 SCAPERQ9BY12 1400 aa12.69□□□□□ -0.38
PCDH11Y-202ENST00000333703 NBR1Q14596 966 aa12.68□□□□□ -0.38
PCDH11Y-202ENST00000333703 RAB3GAP2Q9H2M9 1393 aa12.67□□□□□ -0.38
PCDH11Y-202ENST00000333703 HAP1P54257 671 aaPredicted RBP12.67□□□□□ -0.38
PCDH11Y-202ENST00000333703 KIF14Q15058 1648 aa12.66□□□□□ -0.38
PCDH11Y-202ENST00000333703 UHRF1BP1LA0JNW5 1464 aa12.66□□□□□ -0.38
PCDH11Y-202ENST00000333703 ANP32BQ92688 251 aaKnown RBP12.66□□□□□ -0.38
PCDH11Y-202ENST00000333703 ANP32EQ9BTT0 268 aa12.66□□□□□ -0.38
PCDH11Y-202ENST00000333703 KNSTRNQ9Y448 316 aa12.65□□□□□ -0.38
PCDH11Y-202ENST00000333703 MIA2Q96PC5 1412 aa12.65□□□□□ -0.38
PCDH11Y-202ENST00000333703 DDRGK1Q96HY6 314 aa12.65□□□□□ -0.38
PCDH11Y-202ENST00000333703 THEMISQ8N1K5 641 aaPredicted RBP12.64□□□□□ -0.39
PCDH11Y-202ENST00000333703 EPRSP07814 1512 aaKnown RBP12.64□□□□□ -0.39
PCDH11Y-202ENST00000333703 KIAA0556O60303 1618 aa12.63□□□□□ -0.39
PCDH11Y-202ENST00000333703 ADGRL1O94910 1474 aa12.63□□□□□ -0.39
PCDH11Y-202ENST00000333703 CHD1O14646 1710 aa12.63□□□□□ -0.39
PCDH11Y-202ENST00000333703 CTTNBP2Q8WZ74 1663 aa12.62□□□□□ -0.39
PCDH11Y-202ENST00000333703 STAC3Q96MF2 364 aa12.62□□□□□ -0.39
PCDH11Y-202ENST00000333703 NUP155O75694 1391 aa12.6□□□□□ -0.39
PCDH11Y-202ENST00000333703 CFAP53Q96M91 514 aa12.6□□□□□ -0.39
PCDH11Y-202ENST00000333703 POGKQ9P215 609 aa12.6□□□□□ -0.39
PCDH11Y-202ENST00000333703 RAPGEF6Q8TEU7 1601 aa12.6□□□□□ -0.39
PCDH11Y-202ENST00000333703 HSPA5P11021 654 aaKnown RBP12.6□□□□□ -0.39
PCDH11Y-202ENST00000333703 FANCAO15360 1455 aa12.6□□□□□ -0.39
PCDH11Y-202ENST00000333703 NEO1Q92859 1461 aa12.58□□□□□ -0.4
PCDH11Y-202ENST00000333703 BECN1Q14457 450 aa12.57□□□□□ -0.4
PCDH11Y-202ENST00000333703 ERICH6BQ5W0A0 696 aa12.57□□□□□ -0.4
PCDH11Y-202ENST00000333703 VGFO15240 615 aaPredicted RBP12.56□□□□□ -0.4
PCDH11Y-202ENST00000333703 MYH16Q9H6N6 1097 aa12.56□□□□□ -0.4
PCDH11Y-202ENST00000333703 NCOA2Q15596 1464 aa12.56□□□□□ -0.4
PCDH11Y-202ENST00000333703 CFAP74Q9C0B2 1584 aa12.55□□□□□ -0.4
PCDH11Y-202ENST00000333703 DHX57Q6P158 1386 aaKnown RBP12.55□□□□□ -0.4
PCDH11Y-202ENST00000333703 PLCH2O75038 1416 aa12.55□□□□□ -0.4
PCDH11Y-202ENST00000333703 KIF15Q9NS87 1388 aa12.55□□□□□ -0.4
PCDH11Y-202ENST00000333703 RAPGEF3O95398 923 aa12.55□□□□□ -0.4
PCDH11Y-202ENST00000333703 CNTLNQ9NXG0 1405 aa12.55□□□□□ -0.4
PCDH11Y-202ENST00000333703 DCAF11Q8TEB1 546 aa12.55□□□□□ -0.4
PCDH11Y-202ENST00000333703 ANKLE2Q86XL3 938 aa12.54□□□□□ -0.4
PCDH11Y-202ENST00000333703 AFAP1Q8N556 730 aa12.54□□□□□ -0.4
PCDH11Y-202ENST00000333703 TMF1P82094 1093 aa12.54□□□□□ -0.4
PCDH11Y-202ENST00000333703 SLC52A1Q9NWF4 448 aa12.54□□□□□ -0.4
PCDH11Y-202ENST00000333703 LRRC9Q6ZRR7 1453 aa12.54□□□□□ -0.4
PCDH11Y-202ENST00000333703 ZNF518AQ6AHZ1 1483 aa12.54□□□□□ -0.4
PCDH11Y-202ENST00000333703 ATP10BO94823 1461 aa12.54□□□□□ -0.4
PCDH11Y-202ENST00000333703 PPM1GO15355 546 aaPredicted RBP12.53□□□□□ -0.4
PCDH11Y-202ENST00000333703 MPHOSPH9Q99550 1183 aa12.53□□□□□ -0.4
PCDH11Y-202ENST00000333703 SENP3-EIF4A1A0A087X0R7 540 aa12.53□□□□□ -0.4
PCDH11Y-202ENST00000333703 CCDC141Q6ZP82 1450 aa12.52□□□□□ -0.4
PCDH11Y-202ENST00000333703 SUPT6HQ7KZ85 1726 aaKnown RBP12.52□□□□□ -0.4
PCDH11Y-202ENST00000333703 MAP3K1Q13233 1512 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms