RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 ZNF777Q9ULD5 760 aaPredicted RBP29.78■■■□□ 2.36
SUMO3-201ENST00000332859 AKNAQ7Z591 1439 aa29.77■■■□□ 2.36
SUMO3-201ENST00000332859 ABCC5O15440 1437 aa29.77■■■□□ 2.36
SUMO3-201ENST00000332859 KCNH8Q96L42 1107 aa29.76■■■□□ 2.35
SUMO3-201ENST00000332859 CDC42BPBQ9Y5S2 1711 aa29.76■■■□□ 2.35
SUMO3-201ENST00000332859 DHX57Q6P158 1386 aaKnown RBP29.75■■■□□ 2.35
SUMO3-201ENST00000332859 MYO5CQ9NQX4 1742 aa29.75■■■□□ 2.35
SUMO3-201ENST00000332859 NPM1P06748 294 aaKnown RBP eCLIP29.74■■■□□ 2.35
SUMO3-201ENST00000332859 RIMBP3CA6NJZ7 1639 aa29.73■■■□□ 2.35
SUMO3-201ENST00000332859 RIMBP3BA6NNM3 1639 aa29.73■■■□□ 2.35
SUMO3-201ENST00000332859 RIMBP3Q9UFD9 1639 aa29.73■■■□□ 2.35
SUMO3-201ENST00000332859 NAIPQ13075 1403 aa29.72■■■□□ 2.35
SUMO3-201ENST00000332859 GCC2Q8IWJ2 1684 aa29.71■■■□□ 2.35
SUMO3-201ENST00000332859 ASXL2Q76L83 1435 aa29.7■■■□□ 2.35
SUMO3-201ENST00000332859 ARHGAP5Q13017 1502 aa29.7■■■□□ 2.35
SUMO3-201ENST00000332859 ROCK1Q13464 1354 aa29.7■■■□□ 2.34
SUMO3-201ENST00000332859 CHIC2Q9UKJ5 165 aa29.69■■■□□ 2.34
SUMO3-201ENST00000332859 CROCC2H7BZ55 1655 aa29.69■■■□□ 2.34
SUMO3-201ENST00000332859 CLSPNQ9HAW4 1339 aa29.68■■■□□ 2.34
SUMO3-201ENST00000332859 SAMD9LQ8IVG5 1584 aa29.68■■■□□ 2.34
SUMO3-201ENST00000332859 PLCH2O75038 1416 aa29.66■■■□□ 2.34
SUMO3-201ENST00000332859 ARHGEF5Q12774 1597 aa29.65■■■□□ 2.34
SUMO3-201ENST00000332859 RRP7BPQ9NSQ0 103 aa29.64■■■□□ 2.33
SUMO3-201ENST00000332859 ADGBQ8N7X0 1667 aa29.63■■■□□ 2.33
SUMO3-201ENST00000332859 SHANK2Q9UPX8 1470 aa29.62■■■□□ 2.33
SUMO3-201ENST00000332859 ARAP3Q8WWN8 1544 aa29.62■■■□□ 2.33
SUMO3-201ENST00000332859 PLEKHH2Q8IVE3 1493 aa29.62■■■□□ 2.33
SUMO3-201ENST00000332859 ABCA9Q8IUA7 1624 aa29.61■■■□□ 2.33
SUMO3-201ENST00000332859 ADGRL2O95490 1459 aa29.6■■■□□ 2.33
SUMO3-201ENST00000332859 MBD5Q9P267 1494 aa29.59■■■□□ 2.33
SUMO3-201ENST00000332859 CCDC141Q6ZP82 1450 aa29.56■■■□□ 2.32
SUMO3-201ENST00000332859 RSPH4AQ5TD94 716 aa29.56■■■□□ 2.32
SUMO3-201ENST00000332859 CYB5RLQ6IPT4 315 aa29.56■■■□□ 2.32
SUMO3-201ENST00000332859 KIAA1107Q9UPP5 1409 aa29.55■■■□□ 2.32
SUMO3-201ENST00000332859 EFCAB2Q5VUJ9 269 aa29.55■■■□□ 2.32
SUMO3-201ENST00000332859 SYCP2Q9BX26 1530 aa29.55■■■□□ 2.32
SUMO3-201ENST00000332859 HNRNPMP52272 730 aaKnown RBP eCLIP29.54■■■□□ 2.32
SUMO3-201ENST00000332859 C9orf84Q5VXU9 1444 aa29.54■■■□□ 2.32
SUMO3-201ENST00000332859 NCOA1Q15788 1441 aa29.53■■■□□ 2.32
SUMO3-201ENST00000332859 ANKRD30AQ9BXX3 1397 aa29.53■■■□□ 2.32
SUMO3-201ENST00000332859 TSPY4P0CV99 314 aa29.52■■■□□ 2.32
SUMO3-201ENST00000332859 TSPY10P0CW01 314 aa29.52■■■□□ 2.32
SUMO3-201ENST00000332859 ACIN1Q9UKV3 1341 aaKnown RBP29.51■■■□□ 2.31
SUMO3-201ENST00000332859 MAPKBP1O60336 1514 aa29.5■■■□□ 2.31
SUMO3-201ENST00000332859 KDM6BO15054 1643 aa29.49■■■□□ 2.31
SUMO3-201ENST00000332859 ABCC1P33527 1531 aa29.49■■■□□ 2.31
SUMO3-201ENST00000332859 MAST1Q9Y2H9 1570 aa29.45■■■□□ 2.31
SUMO3-201ENST00000332859 FANCAO15360 1455 aa29.43■■■□□ 2.3
SUMO3-201ENST00000332859 ARHGEF12Q9NZN5 1544 aa29.43■■■□□ 2.3
SUMO3-201ENST00000332859 TRIM52Q96A61 297 aa29.36■■■□□ 2.29
SUMO3-201ENST00000332859 CD109Q6YHK3 1445 aa29.36■■■□□ 2.29
SUMO3-201ENST00000332859 ANKRD50Q9ULJ7 1429 aa29.35■■■□□ 2.29
SUMO3-201ENST00000332859 KIF15Q9NS87 1388 aa29.35■■■□□ 2.29
SUMO3-201ENST00000332859 CFAP74Q9C0B2 1584 aa29.34■■■□□ 2.29
SUMO3-201ENST00000332859 PLXNC1O60486 1568 aa29.33■■■□□ 2.29
SUMO3-201ENST00000332859 TRAPPC8Q9Y2L5 1435 aa29.32■■■□□ 2.28
SUMO3-201ENST00000332859 ADGRL1O94910 1474 aa29.31■■■□□ 2.28
SUMO3-201ENST00000332859 GLI2P10070 1586 aa29.28■■■□□ 2.28
SUMO3-201ENST00000332859 SCAPERQ9BY12 1400 aa29.25■■■□□ 2.27
SUMO3-201ENST00000332859 RTEL1-TNFRSF6BF6WH68 1400 aa29.24■■■□□ 2.27
SUMO3-201ENST00000332859 MAP3K4Q9Y6R4 1608 aa29.24■■■□□ 2.27
SUMO3-201ENST00000332859 MPHOSPH9Q99550 1183 aa29.24■■■□□ 2.27
SUMO3-201ENST00000332859 ZNF316A6NFI3 1004 aaPredicted RBP29.23■■■□□ 2.27
SUMO3-201ENST00000332859 SPAG9O60271 1321 aaKnown RBP29.22■■■□□ 2.27
SUMO3-201ENST00000332859 DENND4BO75064 1496 aaPredicted RBP29.22■■■□□ 2.27
SUMO3-201ENST00000332859 DUOX2Q9NRD8 1548 aa29.21■■■□□ 2.27
SUMO3-201ENST00000332859 ZFYVE16Q7Z3T8 1539 aa29.21■■■□□ 2.27
SUMO3-201ENST00000332859 NEO1Q92859 1461 aa29.2■■■□□ 2.26
SUMO3-201ENST00000332859 DIP2BQ9P265 1576 aa29.19■■■□□ 2.26
SUMO3-201ENST00000332859 AFAP1Q8N556 730 aa29.19■■■□□ 2.26
SUMO3-201ENST00000332859 PZPP20742 1482 aa29.17■■■□□ 2.26
SUMO3-201ENST00000332859 INO80Q9ULG1 1556 aaPredicted RBP29.17■■■□□ 2.26
SUMO3-201ENST00000332859 SIN3AQ96ST3 1273 aa29.17■■■□□ 2.26
SUMO3-201ENST00000332859 KDM5DQ9BY66 1539 aa29.16■■■□□ 2.26
SUMO3-201ENST00000332859 ATP7AQ04656 1500 aa29.15■■■□□ 2.26
SUMO3-201ENST00000332859 ZNF518AQ6AHZ1 1483 aa29.15■■■□□ 2.26
SUMO3-201ENST00000332859 ERBINQ96RT1 1412 aa29.15■■■□□ 2.26
SUMO3-201ENST00000332859 DIEXFQ68CQ4 756 aaKnown RBP29.15■■■□□ 2.26
SUMO3-201ENST00000332859 SLC4A1APQ9BWU0 796 aaKnown RBP29.15■■■□□ 2.26
SUMO3-201ENST00000332859 NEUROD1Q13562 356 aa29.13■■■□□ 2.25
SUMO3-201ENST00000332859 TIMELESSQ9UNS1 1208 aa29.13■■■□□ 2.25
SUMO3-201ENST00000332859 POGZQ7Z3K3 1410 aa29.11■■■□□ 2.25
SUMO3-201ENST00000332859 NUP155O75694 1391 aa29.11■■■□□ 2.25
SUMO3-201ENST00000332859 FAM69CQ0P6D2 419 aa29.1■■■□□ 2.25
SUMO3-201ENST00000332859 UNC13BO14795 1591 aa29.1■■■□□ 2.25
SUMO3-201ENST00000332859 KDM5CP41229 1560 aa29.08■■■□□ 2.25
SUMO3-201ENST00000332859 ANKRD30BQ9BXX2 1392 aa29.03■■■□□ 2.24
SUMO3-201ENST00000332859 MYT1LQ9UL68 1186 aa29.03■■■□□ 2.24
SUMO3-201ENST00000332859 KIDINS220Q9ULH0 1771 aa29.02■■■□□ 2.24
SUMO3-201ENST00000332859 TONSLQ96HA7 1378 aa29.02■■■□□ 2.24
SUMO3-201ENST00000332859 FOXD1Q16676 465 aa29.01■■■□□ 2.24
SUMO3-201ENST00000332859 FAM135AQ9P2D6 1515 aa29.01■■■□□ 2.23
SUMO3-201ENST00000332859 MAGI2Q86UL8 1455 aa29.01■■■□□ 2.23
SUMO3-201ENST00000332859 MLH3Q9UHC1 1453 aa29.01■■■□□ 2.23
SUMO3-201ENST00000332859 HECW2Q9P2P5 1572 aa29■■■□□ 2.23
SUMO3-201ENST00000332859 TEX14Q8IWB6 1497 aa28.99■■■□□ 2.23
SUMO3-201ENST00000332859 PKD2Q13563 968 aa28.99■■■□□ 2.23
SUMO3-201ENST00000332859 IQGAP3Q86VI3 1631 aa28.98■■■□□ 2.23
SUMO3-201ENST00000332859 PPRC1Q5VV67 1664 aaKnown RBP28.96■■■□□ 2.23
SUMO3-201ENST00000332859 EIF2AK4Q9P2K8 1649 aaKnown RBP28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms