RNA–Protein interactions for RNA: ENST00000332512.7

RIPK4-201, Transcript of receptor interacting serine/threonine kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK4, Length 3,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4-201ENST00000332512 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.75■□□□□ 0.43
RIPK4-201ENST00000332512 CCDC7Q96M83 1385 aa17.75■□□□□ 0.43
RIPK4-201ENST00000332512 AKNAQ7Z591 1439 aa17.74■□□□□ 0.43
RIPK4-201ENST00000332512 HNRNPMP52272 730 aaKnown RBP eCLIP17.73■□□□□ 0.43
RIPK4-201ENST00000332512 UACAQ9BZF9 1416 aa17.73■□□□□ 0.43
RIPK4-201ENST00000332512 ERICH3Q5RHP9 1530 aa17.72■□□□□ 0.43
RIPK4-201ENST00000332512 TOP2BQ02880 1626 aa17.72■□□□□ 0.43
RIPK4-201ENST00000332512 SPRYD3Q8NCJ5 442 aa17.72■□□□□ 0.43
RIPK4-201ENST00000332512 SKAP1Q86WV1 359 aa17.72■□□□□ 0.43
RIPK4-201ENST00000332512 FANCD2Q9BXW9 1451 aa17.69■□□□□ 0.42
RIPK4-201ENST00000332512 CCDC146Q8IYE0 955 aa17.69■□□□□ 0.42
RIPK4-201ENST00000332512 UPF2Q9HAU5 1272 aaKnown RBP17.69■□□□□ 0.42
RIPK4-201ENST00000332512 USP47Q96K76 1375 aa17.69■□□□□ 0.42
RIPK4-201ENST00000332512 CDCA7LQ96GN5 454 aa17.69■□□□□ 0.42
RIPK4-201ENST00000332512 CFTRP13569 1480 aa17.69■□□□□ 0.42
RIPK4-201ENST00000332512 PPM1GO15355 546 aaPredicted RBP17.68■□□□□ 0.42
RIPK4-201ENST00000332512 PDE4AP27815 886 aa17.68■□□□□ 0.42
RIPK4-201ENST00000332512 ROCK2O75116 1388 aaKnown RBP17.67■□□□□ 0.42
RIPK4-201ENST00000332512 DDRGK1Q96HY6 314 aa17.67■□□□□ 0.42
RIPK4-201ENST00000332512 HSP90AA1P07900 732 aaKnown RBP17.66■□□□□ 0.42
RIPK4-201ENST00000332512 TIAM1Q13009 1591 aa17.65■□□□□ 0.42
RIPK4-201ENST00000332512 MAPKBP1O60336 1514 aa17.65■□□□□ 0.42
RIPK4-201ENST00000332512 MYOM3Q5VTT5 1437 aa17.65■□□□□ 0.42
RIPK4-201ENST00000332512 CNTLNQ9NXG0 1405 aa17.65■□□□□ 0.42
RIPK4-201ENST00000332512 SLC24A1O60721 1099 aa17.65■□□□□ 0.42
RIPK4-201ENST00000332512 NCOA2Q15596 1464 aa17.65■□□□□ 0.42
RIPK4-201ENST00000332512 RRP1P56182 461 aaKnown RBP17.64■□□□□ 0.41
RIPK4-201ENST00000332512 SLKQ9H2G2 1235 aaPredicted RBP17.64■□□□□ 0.41
RIPK4-201ENST00000332512 CRBNQ96SW2 442 aa17.63■□□□□ 0.41
RIPK4-201ENST00000332512 KTN1Q86UP2 1357 aaKnown RBP17.63■□□□□ 0.41
RIPK4-201ENST00000332512 TCERG1O14776 1098 aaKnown RBP17.62■□□□□ 0.41
RIPK4-201ENST00000332512 TMF1P82094 1093 aa17.62■□□□□ 0.41
RIPK4-201ENST00000332512 NLRP13Q86W25 1043 aa17.62■□□□□ 0.41
RIPK4-201ENST00000332512 PANK3Q9H999 370 aa17.61■□□□□ 0.41
RIPK4-201ENST00000332512 BICRAQ9NZM4 1560 aa17.59■□□□□ 0.41
RIPK4-201ENST00000332512 NCAPD3P42695 1498 aa17.59■□□□□ 0.41
RIPK4-201ENST00000332512 CASKIN1Q8WXD9 1431 aa17.59■□□□□ 0.41
RIPK4-201ENST00000332512 RALBP1Q15311 655 aa17.59■□□□□ 0.41
RIPK4-201ENST00000332512 PDS5BQ9NTI5 1447 aa17.58■□□□□ 0.4
RIPK4-201ENST00000332512 NAIPQ13075 1403 aa17.58■□□□□ 0.4
RIPK4-201ENST00000332512 SAFB2Q14151 953 aaKnown RBP eCLIP17.57■□□□□ 0.4
RIPK4-201ENST00000332512 CLUAP1Q96AJ1 413 aa17.57■□□□□ 0.4
RIPK4-201ENST00000332512 NESP48681 1621 aa17.57■□□□□ 0.4
RIPK4-201ENST00000332512 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
RIPK4-201ENST00000332512 IL27Q8NEV9 243 aa17.56■□□□□ 0.4
RIPK4-201ENST00000332512 MYBBP1AQ9BQG0 1328 aaKnown RBP17.56■□□□□ 0.4
RIPK4-201ENST00000332512 HFM1A2PYH4 1435 aa17.55■□□□□ 0.4
RIPK4-201ENST00000332512 BCL2L13Q9BXK5 485 aa17.54■□□□□ 0.4
RIPK4-201ENST00000332512 PTPRKQ15262 1439 aa17.54■□□□□ 0.4
RIPK4-201ENST00000332512 ANKRD30AQ9BXX3 1397 aa17.53■□□□□ 0.4
RIPK4-201ENST00000332512 GZF1Q9H116 711 aaPredicted RBP17.53■□□□□ 0.4
RIPK4-201ENST00000332512 RRP7AQ9Y3A4 280 aaKnown RBP17.53■□□□□ 0.4
RIPK4-201ENST00000332512 NBPF1Q3BBV0 1214 aa17.52■□□□□ 0.4
RIPK4-201ENST00000332512 PNISRQ8TF01 805 aaKnown RBP17.52■□□□□ 0.4
RIPK4-201ENST00000332512 KIF15Q9NS87 1388 aa17.51■□□□□ 0.39
RIPK4-201ENST00000332512 BECN1Q14457 450 aa17.5■□□□□ 0.39
RIPK4-201ENST00000332512 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.394e-8■■■■□ 22.5
RIPK4-201ENST00000332512 PCF11O94913 1555 aaKnown RBP17.5■□□□□ 0.39
RIPK4-201ENST00000332512 GAPVD1Q14C86 1478 aa17.49■□□□□ 0.39
RIPK4-201ENST00000332512 U2SURPO15042 1029 aaKnown RBP17.49■□□□□ 0.39
RIPK4-201ENST00000332512 FTSJ3Q8IY81 847 aaKnown RBP17.49■□□□□ 0.39
RIPK4-201ENST00000332512 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
RIPK4-201ENST00000332512 ANO8Q9HCE9 1232 aaPredicted RBP17.48■□□□□ 0.39
RIPK4-201ENST00000332512 GOLGA2Q08379 1002 aa17.47■□□□□ 0.39
RIPK4-201ENST00000332512 JPH4Q96JJ6 628 aa17.47■□□□□ 0.39
RIPK4-201ENST00000332512 FYCO1Q9BQS8 1478 aa17.47■□□□□ 0.39
RIPK4-201ENST00000332512 ARID4BQ4LE39 1312 aaPredicted RBP17.46■□□□□ 0.39
RIPK4-201ENST00000332512 APAF1O14727 1248 aa17.46■□□□□ 0.39
RIPK4-201ENST00000332512 NUTM2DQ5VT03 806 aaPredicted RBP17.46■□□□□ 0.39
RIPK4-201ENST00000332512 ADAMTS8Q9UP79 889 aa17.45■□□□□ 0.38
RIPK4-201ENST00000332512 TPRNQ4KMQ1 711 aa17.44■□□□□ 0.38
RIPK4-201ENST00000332512 STAG3Q9UJ98 1225 aa17.44■□□□□ 0.38
RIPK4-201ENST00000332512 CDCA8Q53HL2 280 aa17.44■□□□□ 0.38
RIPK4-201ENST00000332512 COG6Q9Y2V7 657 aa17.43■□□□□ 0.38
RIPK4-201ENST00000332512 POLA1P09884 1462 aaPredicted RBP17.42■□□□□ 0.38
RIPK4-201ENST00000332512 BRPF3Q9ULD4 1205 aa17.42■□□□□ 0.38
RIPK4-201ENST00000332512 UNC13AQ9UPW8 1703 aa17.41■□□□□ 0.38
RIPK4-201ENST00000332512 PDE3BQ13370 1112 aa17.41■□□□□ 0.38
RIPK4-201ENST00000332512 MORC1Q86VD1 984 aa17.41■□□□□ 0.38
RIPK4-201ENST00000332512 C20orf194Q5TEA3 1177 aa17.39■□□□□ 0.37
RIPK4-201ENST00000332512 CDK13Q14004 1512 aaKnown RBP17.38■□□□□ 0.37
RIPK4-201ENST00000332512 PLEKHG5O94827 1062 aa17.38■□□□□ 0.37
RIPK4-201ENST00000332512 NCLP19338 710 aaKnown RBP17.37■□□□□ 0.37
RIPK4-201ENST00000332512 NAP1L5Q96NT1 182 aaPredicted RBP17.37■□□□□ 0.37
RIPK4-201ENST00000332512 STK26Q9P289 416 aa17.37■□□□□ 0.37
RIPK4-201ENST00000332512 GSE1Q14687 1217 aa17.37■□□□□ 0.37
RIPK4-201ENST00000332512 U2AF1L5P0DN76 240 aaPredicted RBP17.37■□□□□ 0.37
RIPK4-201ENST00000332512 U2AF1Q01081 240 aaKnown RBP eCLIP17.37■□□□□ 0.37
RIPK4-201ENST00000332512 NFKBIBQ15653 356 aa17.36■□□□□ 0.37
RIPK4-201ENST00000332512 CFAP53Q96M91 514 aa17.36■□□□□ 0.37
RIPK4-201ENST00000332512 CCDC144AA2RUR9 1427 aa17.35■□□□□ 0.37
RIPK4-201ENST00000332512 GGT6Q6P531 493 aa17.35■□□□□ 0.37
RIPK4-201ENST00000332512 ERCC6Q03468 1493 aa17.35■□□□□ 0.37
RIPK4-201ENST00000332512 PRG4Q92954 1404 aaPredicted RBP17.35■□□□□ 0.37
RIPK4-201ENST00000332512 MFAP1P55081 439 aaKnown RBP17.34■□□□□ 0.37
RIPK4-201ENST00000332512 FAM161AQ3B820 660 aa17.34■□□□□ 0.37
RIPK4-201ENST00000332512 BACH2Q9BYV9 841 aa17.34■□□□□ 0.37
RIPK4-201ENST00000332512 ANKRD50Q9ULJ7 1429 aa17.34■□□□□ 0.37
RIPK4-201ENST00000332512 FOXD4L1Q9NU39 408 aa17.34■□□□□ 0.37
RIPK4-201ENST00000332512 TRAK1Q9UPV9 953 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms