RNA–Protein interactions for RNA: ENST00000331968.9

PRKD1-201, Transcript of protein kinase D1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKD1, Length 3,726 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-201ENST00000331968 SAFB2Q14151 953 aaKnown RBP eCLIP18.25■□□□□ 0.51
PRKD1-201ENST00000331968 PCF11O94913 1555 aaKnown RBP18.25■□□□□ 0.51
PRKD1-201ENST00000331968 PLEKHG5O94827 1062 aa18.25■□□□□ 0.51
PRKD1-201ENST00000331968 CC2D1BQ5T0F9 858 aaKnown RBP18.25■□□□□ 0.51
PRKD1-201ENST00000331968 CYB5RLQ6IPT4 315 aa18.25■□□□□ 0.51
PRKD1-201ENST00000331968 CCDC136Q96JN2 1154 aa18.24■□□□□ 0.51
PRKD1-201ENST00000331968 MYOM3Q5VTT5 1437 aa18.24■□□□□ 0.51
PRKD1-201ENST00000331968 TIAM1Q13009 1591 aa18.24■□□□□ 0.51
PRKD1-201ENST00000331968 TNNT2P45379 298 aaPredicted RBP18.23■□□□□ 0.51
PRKD1-201ENST00000331968 DAXXQ9UER7 740 aaPredicted RBP18.23■□□□□ 0.51
PRKD1-201ENST00000331968 KIF3BO15066 747 aa18.21■□□□□ 0.51
PRKD1-201ENST00000331968 AFAP1Q8N556 730 aa18.21■□□□□ 0.51
PRKD1-201ENST00000331968 PLB1Q6P1J6 1458 aa18.2■□□□□ 0.5
PRKD1-201ENST00000331968 ANP32AP39687 249 aaKnown RBP18.2■□□□□ 0.5
PRKD1-201ENST00000331968 LAMC3Q9Y6N6 1575 aa18.19■□□□□ 0.5
PRKD1-201ENST00000331968 EFCAB2Q5VUJ9 269 aa18.16■□□□□ 0.5
PRKD1-201ENST00000331968 NBPF8Q3BBV2 869 aa18.15■□□□□ 0.5
PRKD1-201ENST00000331968 FYCO1Q9BQS8 1478 aa18.15■□□□□ 0.5
PRKD1-201ENST00000331968 ANKRD30AQ9BXX3 1397 aa18.15■□□□□ 0.5
PRKD1-201ENST00000331968 ST20-MTHFSA0A0A6YYL1 179 aa18.14■□□□□ 0.5
PRKD1-201ENST00000331968 PTPRKQ15262 1439 aa18.14■□□□□ 0.49
PRKD1-201ENST00000331968 ESF1Q9H501 851 aaKnown RBP18.12■□□□□ 0.49
PRKD1-201ENST00000331968 IFT140Q96RY7 1462 aa18.11■□□□□ 0.49
PRKD1-201ENST00000331968 LAS1LQ9Y4W2 734 aaKnown RBP18.11■□□□□ 0.49
PRKD1-201ENST00000331968 MSH5O43196 834 aa18.11■□□□□ 0.49
PRKD1-201ENST00000331968 DEKP35659 375 aaKnown RBP18.1■□□□□ 0.49
PRKD1-201ENST00000331968 ZBTB47Q9UFB7 747 aaPredicted RBP18.1■□□□□ 0.49
PRKD1-201ENST00000331968 NEUROD2Q15784 382 aa18.09■□□□□ 0.49
PRKD1-201ENST00000331968 TIMELESSQ9UNS1 1208 aa18.09■□□□□ 0.49
PRKD1-201ENST00000331968 STK26Q9P289 416 aa18.08■□□□□ 0.49
PRKD1-201ENST00000331968 SPAG9O60271 1321 aaKnown RBP18.08■□□□□ 0.48
PRKD1-201ENST00000331968 ARID4BQ4LE39 1312 aaPredicted RBP18.08■□□□□ 0.48
PRKD1-201ENST00000331968 EPRSP07814 1512 aaKnown RBP18.08■□□□□ 0.48
PRKD1-201ENST00000331968 WDR97A6NE52 1622 aa18.08■□□□□ 0.48
PRKD1-201ENST00000331968 CCDC184Q52MB2 194 aa18.08■□□□□ 0.48
PRKD1-201ENST00000331968 KIF21AQ7Z4S6 1674 aa18.07■□□□□ 0.48
PRKD1-201ENST00000331968 PPP4R2Q9NY27 417 aa18.06■□□□□ 0.48
PRKD1-201ENST00000331968 EIF5BO60841 1220 aaKnown RBP18.06■□□□□ 0.48
PRKD1-201ENST00000331968 NAIPQ13075 1403 aa18.05■□□□□ 0.48
PRKD1-201ENST00000331968 C11orf95C9JLR9 678 aaPredicted RBP18.05■□□□□ 0.48
PRKD1-201ENST00000331968 ARXQ96QS3 562 aa18.05■□□□□ 0.48
PRKD1-201ENST00000331968 UACAQ9BZF9 1416 aa18.04■□□□□ 0.48
PRKD1-201ENST00000331968 WASHC2AQ641Q2 1341 aa18.03■□□□□ 0.48
PRKD1-201ENST00000331968 CCER2I3L3R5 266 aa18.03■□□□□ 0.48
PRKD1-201ENST00000331968 NBPF1Q3BBV0 1214 aa18.02■□□□□ 0.48
PRKD1-201ENST00000331968 OSCARQ8IYS5 282 aa18.02■□□□□ 0.47
PRKD1-201ENST00000331968 IQGAP2Q13576 1575 aa18.01■□□□□ 0.47
PRKD1-201ENST00000331968 KIF15Q9NS87 1388 aa18.01■□□□□ 0.47
PRKD1-201ENST00000331968 ROCK2O75116 1388 aaKnown RBP18.01■□□□□ 0.47
PRKD1-201ENST00000331968 SLC24A1O60721 1099 aa18.01■□□□□ 0.47
PRKD1-201ENST00000331968 GRIN2AQ12879 1464 aa18■□□□□ 0.47
PRKD1-201ENST00000331968 KIAA0586Q9BVV6 1533 aa18■□□□□ 0.47
PRKD1-201ENST00000331968 PPM1GO15355 546 aaPredicted RBP18■□□□□ 0.47
PRKD1-201ENST00000331968 EFCAB5A4FU69 1503 aa17.99■□□□□ 0.47
PRKD1-201ENST00000331968 NOP58Q9Y2X3 529 aaKnown RBP17.99■□□□□ 0.47
PRKD1-201ENST00000331968 ARHGEF11O15085 1522 aa17.99■□□□□ 0.47
PRKD1-201ENST00000331968 THOC2Q8NI27 1593 aaKnown RBP17.97■□□□□ 0.47
PRKD1-201ENST00000331968 ANKRD50Q9ULJ7 1429 aa17.97■□□□□ 0.47
PRKD1-201ENST00000331968 TRHP20396 242 aaPredicted RBP17.96■□□□□ 0.47
PRKD1-201ENST00000331968 KNSTRNQ9Y448 316 aa17.96■□□□□ 0.47
PRKD1-201ENST00000331968 WDR43Q15061 677 aaKnown RBP eCLIP17.95■□□□□ 0.46
PRKD1-201ENST00000331968 HFM1A2PYH4 1435 aa17.95■□□□□ 0.46
PRKD1-201ENST00000331968 TRAK1Q9UPV9 953 aa17.95■□□□□ 0.46
PRKD1-201ENST00000331968 KIF7Q2M1P5 1343 aa17.93■□□□□ 0.46
PRKD1-201ENST00000331968 CANXP27824 592 aaKnown RBP17.93■□□□□ 0.46
PRKD1-201ENST00000331968 RAPGEF3O95398 923 aa17.93■□□□□ 0.46
PRKD1-201ENST00000331968 PRKRIP1Q9H875 184 aaPredicted RBP17.93■□□□□ 0.46
PRKD1-201ENST00000331968 TROQ12816 1431 aaPredicted RBP17.92■□□□□ 0.46
PRKD1-201ENST00000331968 SOX12O15370 315 aa17.92■□□□□ 0.46
PRKD1-201ENST00000331968 CUL7Q14999 1698 aa17.91■□□□□ 0.46
PRKD1-201ENST00000331968 NUTM2FA1L443 756 aa17.9■□□□□ 0.46
PRKD1-201ENST00000331968 USP47Q96K76 1375 aa17.9■□□□□ 0.46
PRKD1-201ENST00000331968 WASHC2CQ9Y4E1 1318 aa17.9■□□□□ 0.46
PRKD1-201ENST00000331968 DAPK1P53355 1430 aa17.9■□□□□ 0.46
PRKD1-201ENST00000331968 ABCC5O15440 1437 aa17.89■□□□□ 0.45
PRKD1-201ENST00000331968 SYNJ2O15056 1496 aa17.88■□□□□ 0.45
PRKD1-201ENST00000331968 TMF1P82094 1093 aa17.88■□□□□ 0.45
PRKD1-201ENST00000331968 TMEM132EQ6IEE7 984 aa17.88■□□□□ 0.45
PRKD1-201ENST00000331968 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.87■□□□□ 0.45
PRKD1-201ENST00000331968 PANK3Q9H999 370 aa17.87■□□□□ 0.45
PRKD1-201ENST00000331968 EHBP1L1Q8N3D4 1523 aa17.87■□□□□ 0.45
PRKD1-201ENST00000331968 CCDC144AA2RUR9 1427 aa17.86■□□□□ 0.45
PRKD1-201ENST00000331968 NEFMP07197 916 aa17.86■□□□□ 0.45
PRKD1-201ENST00000331968 MAPKBP1O60336 1514 aa17.85■□□□□ 0.45
PRKD1-201ENST00000331968 PAK3O75914 559 aaPredicted RBP17.85■□□□□ 0.45
PRKD1-201ENST00000331968 CCDC146Q8IYE0 955 aa17.84■□□□□ 0.45
PRKD1-201ENST00000331968 POGKQ9P215 609 aa17.84■□□□□ 0.45
PRKD1-201ENST00000331968 SUPT6HQ7KZ85 1726 aaKnown RBP17.84■□□□□ 0.45
PRKD1-201ENST00000331968 PTPN23Q9H3S7 1636 aa17.84■□□□□ 0.45
PRKD1-201ENST00000331968 ARHGAP5Q13017 1502 aa17.84■□□□□ 0.45
PRKD1-201ENST00000331968 C9orf84Q5VXU9 1444 aa17.83■□□□□ 0.45
PRKD1-201ENST00000331968 NUP153P49790 1475 aaKnown RBP17.83■□□□□ 0.44
PRKD1-201ENST00000331968 FAM69CQ0P6D2 419 aa17.82■□□□□ 0.44
PRKD1-201ENST00000331968 HECW1Q76N89 1606 aa17.82■□□□□ 0.44
PRKD1-201ENST00000331968 ZBTB7CA1YPR0 619 aa17.82■□□□□ 0.44
PRKD1-201ENST00000331968 SRPK2P78362 688 aaKnown RBP17.82■□□□□ 0.44
PRKD1-201ENST00000331968 SCAPERQ9BY12 1400 aa17.81■□□□□ 0.44
PRKD1-201ENST00000331968 CFAP70Q5T0N1 1121 aa17.81■□□□□ 0.44
PRKD1-201ENST00000331968 KANK1Q14678 1352 aa17.8■□□□□ 0.44
PRKD1-201ENST00000331968 RSPH4AQ5TD94 716 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms