RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 RBM19Q9Y4C8 960 aaKnown RBP18.05■□□□□ 0.48
FNDC1-202ENST00000329629 NUDCQ9Y266 331 aa18.04■□□□□ 0.48
FNDC1-202ENST00000329629 TDRD9Q8NDG6 1382 aaKnown RBP18.03■□□□□ 0.48
FNDC1-202ENST00000329629 SIN3AQ96ST3 1273 aa18.02■□□□□ 0.48
FNDC1-202ENST00000329629 U2SURPO15042 1029 aaKnown RBP18.02■□□□□ 0.48
FNDC1-202ENST00000329629 MYO15BQ96JP2 1530 aa18.02■□□□□ 0.47
FNDC1-202ENST00000329629 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
FNDC1-202ENST00000329629 GGT6Q6P531 493 aa18.01■□□□□ 0.47
FNDC1-202ENST00000329629 CHMP4BQ9H444 224 aaKnown RBP18.01■□□□□ 0.47
FNDC1-202ENST00000329629 GZF1Q9H116 711 aaPredicted RBP18■□□□□ 0.47
FNDC1-202ENST00000329629 MS4A1P11836 297 aa17.99■□□□□ 0.47
FNDC1-202ENST00000329629 CLSTN1O94985 981 aa17.99■□□□□ 0.47
FNDC1-202ENST00000329629 NPHP1O15259 732 aa17.97■□□□□ 0.47
FNDC1-202ENST00000329629 MCCP23508 829 aa17.97■□□□□ 0.47
FNDC1-202ENST00000329629 GOLGA2Q08379 1002 aa17.94■□□□□ 0.46
FNDC1-202ENST00000329629 ABCC8Q09428 1581 aa17.93■□□□□ 0.46
FNDC1-202ENST00000329629 CADPSQ9ULU8 1353 aa17.93■□□□□ 0.46
FNDC1-202ENST00000329629 DCAF11Q8TEB1 546 aa17.92■□□□□ 0.46
FNDC1-202ENST00000329629 EFCAB2Q5VUJ9 269 aa17.91■□□□□ 0.46
FNDC1-202ENST00000329629 APBB1O00213 710 aa17.91■□□□□ 0.46
FNDC1-202ENST00000329629 SLKQ9H2G2 1235 aaPredicted RBP17.91■□□□□ 0.46
FNDC1-202ENST00000329629 PNNQ9H307 717 aaKnown RBP17.91■□□□□ 0.46
FNDC1-202ENST00000329629 KIAA2012Q0VF49 1180 aa17.9■□□□□ 0.46
FNDC1-202ENST00000329629 ARHGAP35Q9NRY4 1499 aa17.9■□□□□ 0.46
FNDC1-202ENST00000329629 GNL2Q13823 731 aaKnown RBP17.89■□□□□ 0.45
FNDC1-202ENST00000329629 SRPK2P78362 688 aaKnown RBP17.89■□□□□ 0.45
FNDC1-202ENST00000329629 TOP2AP11388 1531 aaKnown RBP17.89■□□□□ 0.45
FNDC1-202ENST00000329629 GBP4Q96PP9 640 aa17.88■□□□□ 0.45
FNDC1-202ENST00000329629 TNNT3P45378 269 aaPredicted RBP17.88■□□□□ 0.45
FNDC1-202ENST00000329629 TMF1P82094 1093 aa17.86■□□□□ 0.45
FNDC1-202ENST00000329629 SAFB2Q14151 953 aaKnown RBP eCLIP17.86■□□□□ 0.45
FNDC1-202ENST00000329629 NOC3LQ8WTT2 800 aaKnown RBP17.85■□□□□ 0.45
FNDC1-202ENST00000329629 WIZO95785 1651 aa17.85■□□□□ 0.45
FNDC1-202ENST00000329629 FMN1Q68DA7 1419 aa17.84■□□□□ 0.45
FNDC1-202ENST00000329629 ISY1Q9ULR0 285 aaKnown RBP17.84■□□□□ 0.45
FNDC1-202ENST00000329629 SOX12O15370 315 aa17.84■□□□□ 0.45
FNDC1-202ENST00000329629 STK26Q9P289 416 aa17.84■□□□□ 0.45
FNDC1-202ENST00000329629 PTMSP20962 102 aa17.83■□□□□ 0.44
FNDC1-202ENST00000329629 GOLGA6L3A6NEY3 463 aa17.82■□□□□ 0.44
FNDC1-202ENST00000329629 PKD2Q13563 968 aa17.8■□□□□ 0.44
FNDC1-202ENST00000329629 KIAA1211Q6ZU35 1233 aa17.8■□□□□ 0.44
FNDC1-202ENST00000329629 CFAP44Q96MT7 982 aa17.79■□□□□ 0.44
FNDC1-202ENST00000329629 ATAD2BQ9ULI0 1458 aa17.79■□□□□ 0.44
FNDC1-202ENST00000329629 MORC1Q86VD1 984 aa17.78■□□□□ 0.44
FNDC1-202ENST00000329629 CCER2I3L3R5 266 aa17.77■□□□□ 0.44
FNDC1-202ENST00000329629 MFAP1P55081 439 aaKnown RBP17.77■□□□□ 0.44
FNDC1-202ENST00000329629 JPH4Q96JJ6 628 aa17.77■□□□□ 0.44
FNDC1-202ENST00000329629 ITPRIPQ8IWB1 547 aa17.77■□□□□ 0.43
FNDC1-202ENST00000329629 FOXD4L1Q9NU39 408 aa17.76■□□□□ 0.43
FNDC1-202ENST00000329629 VPS8Q8N3P4 1428 aa17.76■□□□□ 0.43
FNDC1-202ENST00000329629 KIF3BO15066 747 aa17.76■□□□□ 0.43
FNDC1-202ENST00000329629 SYAP1Q96A49 352 aaPredicted RBP17.75■□□□□ 0.43
FNDC1-202ENST00000329629 ANKRD30AQ9BXX3 1397 aa17.75■□□□□ 0.43
FNDC1-202ENST00000329629 RAPGEF2Q9Y4G8 1499 aa17.75■□□□□ 0.43
FNDC1-202ENST00000329629 HSP90B1P14625 803 aaKnown RBP17.75■□□□□ 0.43
FNDC1-202ENST00000329629 PAK3O75914 559 aaPredicted RBP17.75■□□□□ 0.43
FNDC1-202ENST00000329629 HDGFL2Q7Z4V5 671 aaPredicted RBP17.74■□□□□ 0.43
FNDC1-202ENST00000329629 TSHZ2Q9NRE2 1034 aa17.74■□□□□ 0.43
FNDC1-202ENST00000329629 RCAN3Q9UKA8 241 aa17.74■□□□□ 0.43
FNDC1-202ENST00000329629 SETD5Q9C0A6 1442 aa17.74■□□□□ 0.43
FNDC1-202ENST00000329629 FANCD2Q9BXW9 1451 aa17.74■□□□□ 0.43
FNDC1-202ENST00000329629 PDE4CQ08493 712 aa17.74■□□□□ 0.43
FNDC1-202ENST00000329629 HSPA5P11021 654 aaKnown RBP17.74■□□□□ 0.43
FNDC1-202ENST00000329629 HNRNPMP52272 730 aaKnown RBP eCLIP17.74■□□□□ 0.43
FNDC1-202ENST00000329629 TCERG1O14776 1098 aaKnown RBP17.73■□□□□ 0.43
FNDC1-202ENST00000329629 EID1Q9Y6B2 187 aa17.73■□□□□ 0.43
FNDC1-202ENST00000329629 GOLGA6L1Q8N7Z2 621 aa17.73■□□□□ 0.43
FNDC1-202ENST00000329629 TPM4P67936 248 aa17.72■□□□□ 0.43
FNDC1-202ENST00000329629 SPAG9O60271 1321 aaKnown RBP17.72■□□□□ 0.43
FNDC1-202ENST00000329629 NUP155O75694 1391 aa17.72■□□□□ 0.43
FNDC1-202ENST00000329629 RTF1Q92541 710 aaKnown RBP17.72■□□□□ 0.43
FNDC1-202ENST00000329629 IPO9Q96P70 1041 aaKnown RBP17.72■□□□□ 0.43
FNDC1-202ENST00000329629 RWDD1Q9H446 243 aaPredicted RBP17.72■□□□□ 0.43
FNDC1-202ENST00000329629 SMARCA4P51532 1647 aa17.72■□□□□ 0.43
FNDC1-202ENST00000329629 A0A0U1RQG5 324 aaPredicted RBP17.71■□□□□ 0.43
FNDC1-202ENST00000329629 OSCARQ8IYS5 282 aa17.71■□□□□ 0.43
FNDC1-202ENST00000329629 KANK4Q5T7N3 995 aaPredicted RBP17.71■□□□□ 0.43
FNDC1-202ENST00000329629 CYB5RLQ6IPT4 315 aa17.71■□□□□ 0.43
FNDC1-202ENST00000329629 IPO8O15397 1037 aaKnown RBP17.7■□□□□ 0.42
FNDC1-202ENST00000329629 HTATSF1O43719 755 aaKnown RBP17.7■□□□□ 0.42
FNDC1-202ENST00000329629 NOL8Q76FK4 1167 aaKnown RBP17.7■□□□□ 0.42
FNDC1-202ENST00000329629 FOXD1Q16676 465 aa17.7■□□□□ 0.42
FNDC1-202ENST00000329629 WASHC2CQ9Y4E1 1318 aa17.69■□□□□ 0.42
FNDC1-202ENST00000329629 KTN1Q86UP2 1357 aaKnown RBP17.69■□□□□ 0.42
FNDC1-202ENST00000329629 FHOD3Q2V2M9 1422 aa17.69■□□□□ 0.42
FNDC1-202ENST00000329629 CSB-PGBD3P0DP91 1061 aa17.68■□□□□ 0.42
FNDC1-202ENST00000329629 CALD1Q05682 793 aaKnown RBP17.67■□□□□ 0.42
FNDC1-202ENST00000329629 CREBRFQ8IUR6 639 aa17.67■□□□□ 0.42
FNDC1-202ENST00000329629 CCDC18Q5T9S5 1454 aa17.67■□□□□ 0.42
FNDC1-202ENST00000329629 HSP90AA2PQ14568 343 aaPredicted RBP17.66■□□□□ 0.42
FNDC1-202ENST00000329629 RSPH4AQ5TD94 716 aa17.66■□□□□ 0.42
FNDC1-202ENST00000329629 FOXD4L5Q5VV16 416 aaPredicted RBP17.65■□□□□ 0.42
FNDC1-202ENST00000329629 FOXD4L4Q8WXT5 416 aaPredicted RBP17.65■□□□□ 0.42
FNDC1-202ENST00000329629 TRIM6-TRIM34B2RNG4 842 aa17.64■□□□□ 0.41
FNDC1-202ENST00000329629 PMFBP1Q8TBY8 1022 aa17.64■□□□□ 0.41
FNDC1-202ENST00000329629 MPHOSPH9Q99550 1183 aa17.64■□□□□ 0.41
FNDC1-202ENST00000329629 ROCK2O75116 1388 aaKnown RBP17.63■□□□□ 0.41
FNDC1-202ENST00000329629 CCDC9Q9Y3X0 531 aaKnown RBP17.63■□□□□ 0.41
FNDC1-202ENST00000329629 TIMELESSQ9UNS1 1208 aa17.62■□□□□ 0.41
FNDC1-202ENST00000329629 PRM3Q9NNZ6 103 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms