RNA–Protein interactions for RNA: ENST00000327702.11

CACNA1C-201, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-201ENST00000327702 TRHP20396 242 aaPredicted RBP13.69□□□□□ -0.22
CACNA1C-201ENST00000327702 RSF1Q96T23 1441 aaPredicted RBP13.69□□□□□ -0.22
CACNA1C-201ENST00000327702 CCDC34Q96HJ3 373 aa13.69□□□□□ -0.22
CACNA1C-201ENST00000327702 CALRP27797 417 aaKnown RBP13.69□□□□□ -0.22
CACNA1C-201ENST00000327702 CSPP1Q1MSJ5 1256 aa13.66□□□□□ -0.22
CACNA1C-201ENST00000327702 RTF1Q92541 710 aaKnown RBP13.66□□□□□ -0.22
CACNA1C-201ENST00000327702 G3V3G9 751 aa13.66□□□□□ -0.22
CACNA1C-201ENST00000327702 DCAF8Q5TAQ9 597 aa13.66□□□□□ -0.22
CACNA1C-201ENST00000327702 TPM3P06753 285 aa13.65□□□□□ -0.22
CACNA1C-201ENST00000327702 B4GALNT3Q6L9W6 998 aa13.64□□□□□ -0.23
CACNA1C-201ENST00000327702 RASSF8Q8NHQ8 419 aa13.64□□□□□ -0.23
CACNA1C-201ENST00000327702 CREBRFQ8IUR6 639 aa13.64□□□□□ -0.23
CACNA1C-201ENST00000327702 PLEKHD1A6NEE1 506 aa13.63□□□□□ -0.23
CACNA1C-201ENST00000327702 CCDC9Q9Y3X0 531 aaKnown RBP13.63□□□□□ -0.23
CACNA1C-201ENST00000327702 GZF1Q9H116 711 aaPredicted RBP13.63□□□□□ -0.23
CACNA1C-201ENST00000327702 APBB1O00213 710 aa13.62□□□□□ -0.23
CACNA1C-201ENST00000327702 SOX12O15370 315 aa13.61□□□□□ -0.23
CACNA1C-201ENST00000327702 GPATCH3Q96I76 525 aa13.61□□□□□ -0.23
CACNA1C-201ENST00000327702 ZNF330Q9Y3S2 320 aaPredicted RBP13.61□□□□□ -0.23
CACNA1C-201ENST00000327702 GOLGA6L3A6NEY3 463 aa13.6□□□□□ -0.23
CACNA1C-201ENST00000327702 IPO8O15397 1037 aaKnown RBP13.6□□□□□ -0.23
CACNA1C-201ENST00000327702 SCRIBQ14160 1630 aa13.59□□□□□ -0.23
CACNA1C-201ENST00000327702 TMF1P82094 1093 aa13.59□□□□□ -0.23
CACNA1C-201ENST00000327702 GORABQ5T7V8 394 aa13.58□□□□□ -0.23
CACNA1C-201ENST00000327702 PATL2C9JE40 543 aaKnown RBP13.58□□□□□ -0.24
CACNA1C-201ENST00000327702 RB1CC1Q8TDY2 1594 aa13.58□□□□□ -0.24
CACNA1C-201ENST00000327702 PHF14O94880 888 aa13.57□□□□□ -0.24
CACNA1C-201ENST00000327702 VPS53Q5VIR6 699 aa13.57□□□□□ -0.24
CACNA1C-201ENST00000327702 MORC1Q86VD1 984 aa13.56□□□□□ -0.24
CACNA1C-201ENST00000327702 MARCH6O60337 910 aa13.56□□□□□ -0.24
CACNA1C-201ENST00000327702 HDGFP51858 240 aaKnown RBP13.56□□□□□ -0.24
CACNA1C-201ENST00000327702 CLIP1P30622 1438 aa13.55□□□□□ -0.24
CACNA1C-201ENST00000327702 TAF7LQ5H9L4 462 aa13.55□□□□□ -0.24
CACNA1C-201ENST00000327702 CNKSR2Q8WXI2 1034 aa13.55□□□□□ -0.24
CACNA1C-201ENST00000327702 SRPK2P78362 688 aaKnown RBP13.55□□□□□ -0.24
CACNA1C-201ENST00000327702 TPD52L1Q16890 204 aaPredicted RBP13.55□□□□□ -0.24
CACNA1C-201ENST00000327702 TPM2P07951 284 aa13.55□□□□□ -0.24
CACNA1C-201ENST00000327702 CALD1Q05682 793 aaKnown RBP13.55□□□□□ -0.24
CACNA1C-201ENST00000327702 CCDC70Q6NSX1 233 aa13.55□□□□□ -0.24
CACNA1C-201ENST00000327702 CSB-PGBD3P0DP91 1061 aa13.54□□□□□ -0.24
CACNA1C-201ENST00000327702 RWDD1Q9H446 243 aaPredicted RBP13.54□□□□□ -0.24
CACNA1C-201ENST00000327702 TSR1Q2NL82 804 aaKnown RBP13.54□□□□□ -0.24
CACNA1C-201ENST00000327702 ITPRIPQ8IWB1 547 aa13.54□□□□□ -0.24
CACNA1C-201ENST00000327702 CFDP1Q9UEE9 299 aaPredicted RBP13.54□□□□□ -0.24
CACNA1C-201ENST00000327702 WWC1Q8IX03 1113 aa13.53□□□□□ -0.24
CACNA1C-201ENST00000327702 CHMP3Q9Y3E7 222 aa13.53□□□□□ -0.24
CACNA1C-201ENST00000327702 GPS2Q13227 327 aa13.53□□□□□ -0.24
CACNA1C-201ENST00000327702 PES1O00541 588 aaKnown RBP13.52□□□□□ -0.24
CACNA1C-201ENST00000327702 KANK1Q14678 1352 aa13.52□□□□□ -0.24
CACNA1C-201ENST00000327702 TRIM6-TRIM34B2RNG4 842 aa13.52□□□□□ -0.25
CACNA1C-201ENST00000327702 MLECQ14165 292 aa13.52□□□□□ -0.25
CACNA1C-201ENST00000327702 SLKQ9H2G2 1235 aaPredicted RBP13.52□□□□□ -0.25
CACNA1C-201ENST00000327702 MYO15BQ96JP2 1530 aa13.51□□□□□ -0.25
CACNA1C-201ENST00000327702 RRP12Q5JTH9 1297 aaKnown RBP13.5□□□□□ -0.25
CACNA1C-201ENST00000327702 PMFBP1Q8TBY8 1022 aa13.5□□□□□ -0.25
CACNA1C-201ENST00000327702 MFAP1P55081 439 aaKnown RBP13.5□□□□□ -0.25
CACNA1C-201ENST00000327702 TCERG1O14776 1098 aaKnown RBP13.49□□□□□ -0.25
CACNA1C-201ENST00000327702 HDGFL2Q7Z4V5 671 aaPredicted RBP13.49□□□□□ -0.25
CACNA1C-201ENST00000327702 SF3A1Q15459 793 aaKnown RBP13.49□□□□□ -0.25
CACNA1C-201ENST00000327702 CCAR2Q8N163 923 aaKnown RBP13.49□□□□□ -0.25
CACNA1C-201ENST00000327702 PAK3O75914 559 aaPredicted RBP13.48□□□□□ -0.25
CACNA1C-201ENST00000327702 TPM1P09493 284 aa13.48□□□□□ -0.25
CACNA1C-201ENST00000327702 KIF16BQ96L93 1317 aa13.48□□□□□ -0.25
CACNA1C-201ENST00000327702 NACADO15069 1562 aa13.48□□□□□ -0.25
CACNA1C-201ENST00000327702 CHMP4AQ9BY43 222 aa13.48□□□□□ -0.25
CACNA1C-201ENST00000327702 KIF3AQ9Y496 699 aa13.48□□□□□ -0.25
CACNA1C-201ENST00000327702 HDAC5Q9UQL6 1122 aa13.47□□□□□ -0.25
CACNA1C-201ENST00000327702 EEA1Q15075 1411 aa13.47□□□□□ -0.25
CACNA1C-201ENST00000327702 HSP90AA2PQ14568 343 aaPredicted RBP13.46□□□□□ -0.25
CACNA1C-201ENST00000327702 NOL8Q76FK4 1167 aaKnown RBP13.46□□□□□ -0.25
CACNA1C-201ENST00000327702 ZNF771Q7L3S4 317 aaPredicted RBP13.46□□□□□ -0.25
CACNA1C-201ENST00000327702 TOMM22Q9NS69 142 aa13.46□□□□□ -0.25
CACNA1C-201ENST00000327702 HMMRO75330 724 aa13.45□□□□□ -0.26
CACNA1C-201ENST00000327702 STK31Q9BXU1 1019 aa13.45□□□□□ -0.26
CACNA1C-201ENST00000327702 RBM19Q9Y4C8 960 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-201ENST00000327702 SPAG9O60271 1321 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-201ENST00000327702 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
CACNA1C-201ENST00000327702 KTN1Q86UP2 1357 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-201ENST00000327702 H3BQV1 296 aa13.45□□□□□ -0.26
CACNA1C-201ENST00000327702 IFFO2Q5TF58 517 aa13.45□□□□□ -0.26
CACNA1C-201ENST00000327702 GOLGA6L19H0YKK7 550 aa13.44□□□□□ -0.26
CACNA1C-201ENST00000327702 TCEAL9Q9UHQ7 104 aa13.44□□□□□ -0.26
CACNA1C-201ENST00000327702 ST18O60284 1047 aa13.43□□□□□ -0.26
CACNA1C-201ENST00000327702 DCAF11Q8TEB1 546 aa13.43□□□□□ -0.26
CACNA1C-201ENST00000327702 TEX35Q5T0J7 233 aa13.42□□□□□ -0.26
CACNA1C-201ENST00000327702 GOLGA3Q08378 1498 aa13.42□□□□□ -0.26
CACNA1C-201ENST00000327702 SAFB2Q14151 953 aaKnown RBP eCLIP13.42□□□□□ -0.26
CACNA1C-201ENST00000327702 FRAT2O75474 233 aaPredicted RBP13.42□□□□□ -0.26
CACNA1C-201ENST00000327702 DDX11L8A8MPP1 907 aa13.42□□□□□ -0.26
CACNA1C-201ENST00000327702 CWC22Q9HCG8 908 aaKnown RBP13.42□□□□□ -0.26
CACNA1C-201ENST00000327702 CTDP1Q9Y5B0 961 aaPredicted RBP13.42□□□□□ -0.26
CACNA1C-201ENST00000327702 PCMTD1Q96MG8 357 aaPredicted RBP13.41□□□□□ -0.26
CACNA1C-201ENST00000327702 MSH5O43196 834 aa13.41□□□□□ -0.26
CACNA1C-201ENST00000327702 AKAP17AQ02040 695 aaKnown RBP13.41□□□□□ -0.26
CACNA1C-201ENST00000327702 FOXD4L5Q5VV16 416 aaPredicted RBP13.4□□□□□ -0.26
CACNA1C-201ENST00000327702 FOXD4L4Q8WXT5 416 aaPredicted RBP13.4□□□□□ -0.26
CACNA1C-201ENST00000327702 CHMP4CQ96CF2 233 aa13.4□□□□□ -0.26
CACNA1C-201ENST00000327702 RCAN3Q9UKA8 241 aa13.4□□□□□ -0.26
CACNA1C-201ENST00000327702 FAM184AQ8NB25 1140 aa13.39□□□□□ -0.27
CACNA1C-201ENST00000327702 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms