RNA–Protein interactions for RNA: ENST00000325674.11

CAST-202, Transcript of calpastatin, humanhuman

TSL 5 BASIC

Gene CAST, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-202ENST00000325674 TMEM51Q9NW97 253 aa9.26□□□□□ -0.93
CAST-202ENST00000325674 NUDCQ9Y266 331 aa9.25□□□□□ -0.93
CAST-202ENST00000325674 FRAT2O75474 233 aaPredicted RBP9.24□□□□□ -0.93
CAST-202ENST00000325674 SIN3AQ96ST3 1273 aa9.24□□□□□ -0.93
CAST-202ENST00000325674 PHLDB1Q86UU1 1377 aa9.23□□□□□ -0.93
CAST-202ENST00000325674 TEX2Q8IWB9 1127 aa9.23□□□□□ -0.93
CAST-202ENST00000325674 XRCC6P12956 609 aaKnown RBP eCLIP9.23□□□□□ -0.93
CAST-202ENST00000325674 CANXP27824 592 aaKnown RBP9.23□□□□□ -0.93
CAST-202ENST00000325674 AEBP2Q6ZN18 517 aaPredicted RBP9.23□□□□□ -0.93
CAST-202ENST00000325674 NCOA1Q15788 1441 aa9.22□□□□□ -0.93
CAST-202ENST00000325674 NCLP19338 710 aaKnown RBP9.22□□□□□ -0.93
CAST-202ENST00000325674 BRD2P25440 801 aaKnown RBP9.22□□□□□ -0.93
CAST-202ENST00000325674 RIPK4P57078 832 aa9.22□□□□□ -0.93
CAST-202ENST00000325674 CECR2Q9BXF3 1484 aa9.22□□□□□ -0.93
CAST-202ENST00000325674 BIVM-ERCC5R4GMW8 1640 aa9.22□□□□□ -0.93
CAST-202ENST00000325674 ERBB4Q15303 1308 aa9.22□□□□□ -0.93
CAST-202ENST00000325674 CCDC144AA2RUR9 1427 aa9.21□□□□□ -0.93
CAST-202ENST00000325674 BICRAQ9NZM4 1560 aa9.21□□□□□ -0.94
CAST-202ENST00000325674 SCAPERQ9BY12 1400 aa9.21□□□□□ -0.94
CAST-202ENST00000325674 CHMP4BQ9H444 224 aaKnown RBP9.21□□□□□ -0.94
CAST-202ENST00000325674 ISY1Q9ULR0 285 aaKnown RBP9.2□□□□□ -0.94
CAST-202ENST00000325674 CTTNBP2Q8WZ74 1663 aa9.2□□□□□ -0.94
CAST-202ENST00000325674 ARID4BQ4LE39 1312 aaPredicted RBP9.2□□□□□ -0.94
CAST-202ENST00000325674 NLRP1Q9C000 1473 aa9.2□□□□□ -0.94
CAST-202ENST00000325674 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.2□□□□□ -0.94
CAST-202ENST00000325674 MTERF4Q7Z6M4 381 aaKnown RBP9.2□□□□□ -0.94
CAST-202ENST00000325674 POGKQ9P215 609 aa9.2□□□□□ -0.94
CAST-202ENST00000325674 CFAP43Q8NDM7 1665 aa9.19□□□□□ -0.94
CAST-202ENST00000325674 RAPGEF2Q9Y4G8 1499 aa9.19□□□□□ -0.94
CAST-202ENST00000325674 ZSCAN20P17040 1043 aaPredicted RBP9.19□□□□□ -0.94
CAST-202ENST00000325674 CCDC184Q52MB2 194 aa9.19□□□□□ -0.94
CAST-202ENST00000325674 FTSJ3Q8IY81 847 aaKnown RBP9.19□□□□□ -0.94
CAST-202ENST00000325674 KIF20AO95235 890 aa9.19□□□□□ -0.94
CAST-202ENST00000325674 SLC20A2Q08357 652 aa9.18□□□□□ -0.94
CAST-202ENST00000325674 ESPNB1AK53 854 aa9.18□□□□□ -0.94
CAST-202ENST00000325674 PRKRIP1Q9H875 184 aaPredicted RBP9.18□□□□□ -0.94
CAST-202ENST00000325674 ZMYM4Q5VZL5 1548 aa9.18□□□□□ -0.94
CAST-202ENST00000325674 CNGB1Q14028 1251 aaPredicted RBP9.17□□□□□ -0.94
CAST-202ENST00000325674 PAXIP1Q6ZW49 1069 aaPredicted RBP9.17□□□□□ -0.94
CAST-202ENST00000325674 TIAM1Q13009 1591 aa9.17□□□□□ -0.94
CAST-202ENST00000325674 ANTXR1Q9H6X2 564 aa9.16□□□□□ -0.94
CAST-202ENST00000325674 OFD1O75665 1012 aa9.16□□□□□ -0.94
CAST-202ENST00000325674 ZNF830Q96NB3 372 aaPredicted RBP9.16□□□□□ -0.94
CAST-202ENST00000325674 KDM2BQ8NHM5 1336 aa9.16□□□□□ -0.94
CAST-202ENST00000325674 LRPPRCP42704 1394 aaKnown RBP9.15□□□□□ -0.94
CAST-202ENST00000325674 PPP4R3BQ5MIZ7 849 aa9.15□□□□□ -0.95
CAST-202ENST00000325674 GTPBP4Q9BZE4 634 aaKnown RBP9.15□□□□□ -0.95
CAST-202ENST00000325674 NPM2Q86SE8 214 aaKnown RBP9.14□□□□□ -0.95
CAST-202ENST00000325674 RNF216Q9NWF9 866 aaPredicted RBP9.14□□□□□ -0.95
CAST-202ENST00000325674 UBTFP17480 764 aaKnown RBP9.14□□□□□ -0.95
CAST-202ENST00000325674 C8orf34Q49A92 452 aa9.14□□□□□ -0.95
CAST-202ENST00000325674 KANK4Q5T7N3 995 aaPredicted RBP9.13□□□□□ -0.95
CAST-202ENST00000325674 PRXQ9BXM0 1461 aa9.13□□□□□ -0.95
CAST-202ENST00000325674 FOXD1Q16676 465 aa9.13□□□□□ -0.95
CAST-202ENST00000325674 MRE11P49959 708 aa9.13□□□□□ -0.95
CAST-202ENST00000325674 MMP14P50281 582 aa9.13□□□□□ -0.95
CAST-202ENST00000325674 RRP1P56182 461 aaKnown RBP9.13□□□□□ -0.95
CAST-202ENST00000325674 TAF3Q5VWG9 929 aa9.13□□□□□ -0.95
CAST-202ENST00000325674 INSRP06213 1382 aa9.12□□□□□ -0.95
CAST-202ENST00000325674 SPATA31E1Q6ZUB1 1445 aa9.12□□□□□ -0.95
CAST-202ENST00000325674 HECW1Q76N89 1606 aa9.12□□□□□ -0.95
CAST-202ENST00000325674 LETM1O95202 739 aaPredicted RBP9.12□□□□□ -0.95
CAST-202ENST00000325674 ZFP91Q96JP5 570 aaPredicted RBP9.12□□□□□ -0.95
CAST-202ENST00000325674 USP19O94966 1318 aa9.11□□□□□ -0.95
CAST-202ENST00000325674 DHX29Q7Z478 1369 aaKnown RBP9.11□□□□□ -0.95
CAST-202ENST00000325674 GOLGA6L3A6NEY3 463 aa9.11□□□□□ -0.95
CAST-202ENST00000325674 KIAA1211Q6ZU35 1233 aa9.11□□□□□ -0.95
CAST-202ENST00000325674 PANK2Q9BZ23 570 aa9.11□□□□□ -0.95
CAST-202ENST00000325674 CCDC7Q96M83 1385 aa9.11□□□□□ -0.95
CAST-202ENST00000325674 ARHGAP31Q2M1Z3 1444 aa9.11□□□□□ -0.95
CAST-202ENST00000325674 E9PCH4 1651 aa9.1□□□□□ -0.95
CAST-202ENST00000325674 PPP1R9BQ96SB3 815 aa9.09□□□□□ -0.95
CAST-202ENST00000325674 CCDC94Q9BW85 323 aaPredicted RBP9.09□□□□□ -0.95
CAST-202ENST00000325674 KTN1Q86UP2 1357 aaKnown RBP9.09□□□□□ -0.95
CAST-202ENST00000325674 UACAQ9BZF9 1416 aa9.09□□□□□ -0.95
CAST-202ENST00000325674 BCCIPQ9P287 314 aaKnown RBP eCLIP9.09□□□□□ -0.95
CAST-202ENST00000325674 ZMYM3Q14202 1370 aa9.08□□□□□ -0.96
CAST-202ENST00000325674 PTPN23Q9H3S7 1636 aa9.08□□□□□ -0.96
CAST-202ENST00000325674 DYNC1I1O14576 645 aa9.08□□□□□ -0.96
CAST-202ENST00000325674 RGS22Q8NE09 1264 aa9.08□□□□□ -0.96
CAST-202ENST00000325674 TOP2BQ02880 1626 aa9.08□□□□□ -0.96
CAST-202ENST00000325674 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.07□□□□□ -0.96
CAST-202ENST00000325674 ZHX1Q9UKY1 873 aaPredicted RBP9.07□□□□□ -0.96
CAST-202ENST00000325674 IBTKQ9P2D0 1353 aaPredicted RBP9.07□□□□□ -0.96
CAST-202ENST00000325674 FAM161AQ3B820 660 aa9.07□□□□□ -0.96
CAST-202ENST00000325674 EXOC6Q8TAG9 804 aa9.07□□□□□ -0.96
CAST-202ENST00000325674 HS1BP3Q53T59 392 aa9.06□□□□□ -0.96
CAST-202ENST00000325674 SECISBP2LQ93073 1101 aaKnown RBP9.06□□□□□ -0.96
CAST-202ENST00000325674 ZNF500O60304 480 aaPredicted RBP9.06□□□□□ -0.96
CAST-202ENST00000325674 SLC4A3P48751 1232 aa9.06□□□□□ -0.96
CAST-202ENST00000325674 DENND4BO75064 1496 aaPredicted RBP9.06□□□□□ -0.96
CAST-202ENST00000325674 HMGXB3Q12766 1538 aa9.06□□□□□ -0.96
CAST-202ENST00000325674 LRRC9Q6ZRR7 1453 aa9.06□□□□□ -0.96
CAST-202ENST00000325674 KIAA1107Q9UPP5 1409 aa9.05□□□□□ -0.96
CAST-202ENST00000325674 SAMD1Q6SPF0 538 aaPredicted RBP9.05□□□□□ -0.96
CAST-202ENST00000325674 CHMP4AQ9BY43 222 aa9.05□□□□□ -0.96
CAST-202ENST00000325674 GRPEL1Q9HAV7 217 aa9.05□□□□□ -0.96
CAST-202ENST00000325674 GCC2Q8IWJ2 1684 aa9.05□□□□□ -0.96
CAST-202ENST00000325674 ARHGAP35Q9NRY4 1499 aa9.05□□□□□ -0.96
CAST-202ENST00000325674 NCOA3Q9Y6Q9 1424 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms