RNA–Protein interactions for RNA: ENST00000324767.11

SCAPER-202, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAPER, Length 4,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-202ENST00000324767 HIRIP3Q9BW71 556 aaPredicted RBP10.31□□□□□ -0.76
SCAPER-202ENST00000324767 CUL7Q14999 1698 aa10.31□□□□□ -0.76
SCAPER-202ENST00000324767 STAC3Q96MF2 364 aa10.31□□□□□ -0.76
SCAPER-202ENST00000324767 KIAA0586Q9BVV6 1533 aa10.3□□□□□ -0.76
SCAPER-202ENST00000324767 SNAPC4Q5SXM2 1469 aa10.29□□□□□ -0.76
SCAPER-202ENST00000324767 WASHC2CQ9Y4E1 1318 aa10.29□□□□□ -0.76
SCAPER-202ENST00000324767 PRG4Q92954 1404 aaPredicted RBP10.29□□□□□ -0.76
SCAPER-202ENST00000324767 MAGI1Q96QZ7 1491 aaPredicted RBP10.28□□□□□ -0.76
SCAPER-202ENST00000324767 CCER2I3L3R5 266 aa10.28□□□□□ -0.76
SCAPER-202ENST00000324767 MLECQ14165 292 aa10.28□□□□□ -0.76
SCAPER-202ENST00000324767 FKBP8Q14318 412 aa10.27□□□□□ -0.76
SCAPER-202ENST00000324767 PLEKHH2Q8IVE3 1493 aa10.27□□□□□ -0.77
SCAPER-202ENST00000324767 ROCK2O75116 1388 aaKnown RBP10.26□□□□□ -0.77
SCAPER-202ENST00000324767 CCDC144AA2RUR9 1427 aa10.26□□□□□ -0.77
SCAPER-202ENST00000324767 EHBP1L1Q8N3D4 1523 aa10.26□□□□□ -0.77
SCAPER-202ENST00000324767 MIA2Q96PC5 1412 aa10.26□□□□□ -0.77
SCAPER-202ENST00000324767 ANP32AP39687 249 aaKnown RBP10.26□□□□□ -0.77
SCAPER-202ENST00000324767 CYB5RLQ6IPT4 315 aa10.26□□□□□ -0.77
SCAPER-202ENST00000324767 UPF2Q9HAU5 1272 aaKnown RBP10.26□□□□□ -0.77
SCAPER-202ENST00000324767 ARAP1Q96P48 1450 aa10.26□□□□□ -0.77
SCAPER-202ENST00000324767 HECW1Q76N89 1606 aa10.26□□□□□ -0.77
SCAPER-202ENST00000324767 PRDM2Q13029 1718 aa10.26□□□□□ -0.77
SCAPER-202ENST00000324767 NCOA2Q15596 1464 aa10.25□□□□□ -0.77
SCAPER-202ENST00000324767 MAPK8IP3Q9UPT6 1336 aa10.25□□□□□ -0.77
SCAPER-202ENST00000324767 HSPA5P11021 654 aaKnown RBP10.25□□□□□ -0.77
SCAPER-202ENST00000324767 BIVM-ERCC5R4GMW8 1640 aa10.25□□□□□ -0.77
SCAPER-202ENST00000324767 CCDC136Q96JN2 1154 aa10.24□□□□□ -0.77
SCAPER-202ENST00000324767 SALL2Q9Y467 1007 aaPredicted RBP10.24□□□□□ -0.77
SCAPER-202ENST00000324767 DHX57Q6P158 1386 aaKnown RBP10.24□□□□□ -0.77
SCAPER-202ENST00000324767 NPM2Q86SE8 214 aaKnown RBP10.24□□□□□ -0.77
SCAPER-202ENST00000324767 EID1Q9Y6B2 187 aa10.24□□□□□ -0.77
SCAPER-202ENST00000324767 HDGFL2Q7Z4V5 671 aaPredicted RBP10.23□□□□□ -0.77
SCAPER-202ENST00000324767 SCAF1Q9H7N4 1312 aaKnown RBP10.23□□□□□ -0.77
SCAPER-202ENST00000324767 TROQ12816 1431 aaPredicted RBP10.23□□□□□ -0.77
SCAPER-202ENST00000324767 MYH16Q9H6N6 1097 aa10.23□□□□□ -0.77
SCAPER-202ENST00000324767 HAP1P54257 671 aaPredicted RBP10.22□□□□□ -0.77
SCAPER-202ENST00000324767 SRPK2P78362 688 aaKnown RBP10.22□□□□□ -0.77
SCAPER-202ENST00000324767 IQGAP2Q13576 1575 aa10.22□□□□□ -0.77
SCAPER-202ENST00000324767 L3MBTL2Q969R5 705 aa10.22□□□□□ -0.77
SCAPER-202ENST00000324767 CHMP4BQ9H444 224 aaKnown RBP10.22□□□□□ -0.77
SCAPER-202ENST00000324767 RRBP1Q9P2E9 1410 aaKnown RBP10.22□□□□□ -0.77
SCAPER-202ENST00000324767 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.22□□□□□ -0.77
SCAPER-202ENST00000324767 RALBP1Q15311 655 aa10.22□□□□□ -0.77
SCAPER-202ENST00000324767 KTN1Q86UP2 1357 aaKnown RBP10.21□□□□□ -0.77
SCAPER-202ENST00000324767 KIF15Q9NS87 1388 aa10.21□□□□□ -0.77
SCAPER-202ENST00000324767 PHLDB1Q86UU1 1377 aa10.21□□□□□ -0.78
SCAPER-202ENST00000324767 VGFO15240 615 aaPredicted RBP10.21□□□□□ -0.78
SCAPER-202ENST00000324767 MS4A1P11836 297 aa10.21□□□□□ -0.78
SCAPER-202ENST00000324767 FOXD1Q16676 465 aa10.2□□□□□ -0.78
SCAPER-202ENST00000324767 EIF5BO60841 1220 aaKnown RBP10.2□□□□□ -0.78
SCAPER-202ENST00000324767 URB2Q14146 1524 aaKnown RBP10.2□□□□□ -0.78
SCAPER-202ENST00000324767 ANKRD50Q9ULJ7 1429 aa10.19□□□□□ -0.78
SCAPER-202ENST00000324767 MAP3K1Q13233 1512 aa10.19□□□□□ -0.78
SCAPER-202ENST00000324767 GRIN2AQ12879 1464 aa10.18□□□□□ -0.78
SCAPER-202ENST00000324767 MORC1Q86VD1 984 aa10.18□□□□□ -0.78
SCAPER-202ENST00000324767 TIAM1Q13009 1591 aa10.18□□□□□ -0.78
SCAPER-202ENST00000324767 ARHGAP5Q13017 1502 aa10.18□□□□□ -0.78
SCAPER-202ENST00000324767 FAM69CQ0P6D2 419 aa10.18□□□□□ -0.78
SCAPER-202ENST00000324767 TERF2IPQ9NYB0 399 aa10.18□□□□□ -0.78
SCAPER-202ENST00000324767 PPM1GO15355 546 aaPredicted RBP10.17□□□□□ -0.78
SCAPER-202ENST00000324767 SENP3Q9H4L4 574 aaPredicted RBP10.16□□□□□ -0.78
SCAPER-202ENST00000324767 DNAJC5BQ9UF47 199 aa10.16□□□□□ -0.78
SCAPER-202ENST00000324767 CC2D1BQ5T0F9 858 aaKnown RBP10.15□□□□□ -0.78
SCAPER-202ENST00000324767 ZBTB7CA1YPR0 619 aa10.15□□□□□ -0.78
SCAPER-202ENST00000324767 CHMP4AQ9BY43 222 aa10.15□□□□□ -0.78
SCAPER-202ENST00000324767 SUPT6HQ7KZ85 1726 aaKnown RBP10.15□□□□□ -0.78
SCAPER-202ENST00000324767 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.14□□□□□ -0.79
SCAPER-202ENST00000324767 EPRSP07814 1512 aaKnown RBP10.14□□□□□ -0.79
SCAPER-202ENST00000324767 CALD1Q05682 793 aaKnown RBP10.14□□□□□ -0.79
SCAPER-202ENST00000324767 STK26Q9P289 416 aa10.14□□□□□ -0.79
SCAPER-202ENST00000324767 HFM1A2PYH4 1435 aa10.13□□□□□ -0.79
SCAPER-202ENST00000324767 LMOD2Q6P5Q4 547 aa10.12□□□□□ -0.79
SCAPER-202ENST00000324767 U2SURPO15042 1029 aaKnown RBP10.12□□□□□ -0.79
SCAPER-202ENST00000324767 BCL11AQ9H165 835 aa10.12□□□□□ -0.79
SCAPER-202ENST00000324767 ZNF644Q9H582 1327 aaPredicted RBP10.11□□□□□ -0.79
SCAPER-202ENST00000324767 FTSJ3Q8IY81 847 aaKnown RBP10.11□□□□□ -0.79
SCAPER-202ENST00000324767 C9orf84Q5VXU9 1444 aa10.1□□□□□ -0.79
SCAPER-202ENST00000324767 NLRP13Q86W25 1043 aa10.1□□□□□ -0.79
SCAPER-202ENST00000324767 ROCK1Q13464 1354 aa10.1□□□□□ -0.79
SCAPER-202ENST00000324767 HSP90AA1P07900 732 aaKnown RBP10.1□□□□□ -0.79
SCAPER-202ENST00000324767 SAFB2Q14151 953 aaKnown RBP eCLIP10.09□□□□□ -0.79
SCAPER-202ENST00000324767 EVC2Q86UK5 1308 aa10.09□□□□□ -0.79
SCAPER-202ENST00000324767 ERICH6BQ5W0A0 696 aa10.08□□□□□ -0.8
SCAPER-202ENST00000324767 TNNT2P45379 298 aaPredicted RBP10.08□□□□□ -0.8
SCAPER-202ENST00000324767 USP47Q96K76 1375 aa10.07□□□□□ -0.8
SCAPER-202ENST00000324767 THOC2Q8NI27 1593 aaKnown RBP10.07□□□□□ -0.8
SCAPER-202ENST00000324767 NEUROD2Q15784 382 aa10.07□□□□□ -0.8
SCAPER-202ENST00000324767 PPP4R2Q9NY27 417 aa10.06□□□□□ -0.8
SCAPER-202ENST00000324767 PDE3BQ13370 1112 aa10.06□□□□□ -0.8
SCAPER-202ENST00000324767 DAPK1P53355 1430 aa10.06□□□□□ -0.8
SCAPER-202ENST00000324767 ST20-MTHFSA0A0A6YYL1 179 aa10.06□□□□□ -0.8
SCAPER-202ENST00000324767 RTF1Q92541 710 aaKnown RBP10.06□□□□□ -0.8
SCAPER-202ENST00000324767 AFAP1Q8N556 730 aa10.05□□□□□ -0.8
SCAPER-202ENST00000324767 NGEFQ8N5V2 710 aa10.05□□□□□ -0.8
SCAPER-202ENST00000324767 PCF11O94913 1555 aaKnown RBP10.05□□□□□ -0.8
SCAPER-202ENST00000324767 ZNF608Q9ULD9 1512 aaPredicted RBP10.05□□□□□ -0.8
SCAPER-202ENST00000324767 KIF14Q15058 1648 aa10.04□□□□□ -0.8
SCAPER-202ENST00000324767 KIAA1107Q9UPP5 1409 aa10.04□□□□□ -0.8
SCAPER-202ENST00000324767 A0A0G2JS52 829 aa10.04□□□□□ -0.8
SCAPER-202ENST00000324767 LMOD3Q0VAK6 560 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 200.2 ms