RNA–Protein interactions for RNA: ENST00000324022.14

GYPA-201, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPA, Length 751 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-201ENST00000324022 PCDHB8Q9UN66 801 aa6.31□□□□□ -1.4
GYPA-201ENST00000324022 TK2O00142 265 aa6.3□□□□□ -1.4
GYPA-201ENST00000324022 MIER1Q8N108 512 aa6.3□□□□□ -1.4
GYPA-201ENST00000324022 NUBP1P53384 320 aa6.29□□□□□ -1.4
GYPA-201ENST00000324022 STAC3Q96MF2 364 aa6.28□□□□□ -1.4
GYPA-201ENST00000324022 NRG2O14511 850 aaPredicted RBP6.27□□□□□ -1.41
GYPA-201ENST00000324022 ARHGAP33O14559 1287 aa6.25□□□□□ -1.41
GYPA-201ENST00000324022 KHSRPQ92945 711 aaKnown RBP eCLIP6.25□□□□□ -1.411e-7■□□□□ 8.2
GYPA-201ENST00000324022 TREML4Q6UXN2 200 aa6.24□□□□□ -1.41
GYPA-201ENST00000324022 PYGBP11216 843 aa6.21□□□□□ -1.42
GYPA-201ENST00000324022 LCE2AQ5TA79 106 aaPredicted RBP6.21□□□□□ -1.42
GYPA-201ENST00000324022 TMEM92Q6UXU6 159 aa6.18□□□□□ -1.42
GYPA-201ENST00000324022 ZBTB47Q9UFB7 747 aaPredicted RBP6.18□□□□□ -1.42
GYPA-201ENST00000324022 LHX6Q9UPM6 363 aa6.16□□□□□ -1.42
GYPA-201ENST00000324022 ITGBL1O95965 494 aaPredicted RBP6.15□□□□□ -1.42
GYPA-201ENST00000324022 THSD4Q6ZMP0 1018 aa6.15□□□□□ -1.42
GYPA-201ENST00000324022 NUDT7P0C024 238 aa6.14□□□□□ -1.43
GYPA-201ENST00000324022 INSM1Q01101 510 aaPredicted RBP6.14□□□□□ -1.43
GYPA-201ENST00000324022 ZNF467Q7Z7K2 595 aaPredicted RBP6.14□□□□□ -1.43
GYPA-201ENST00000324022 DMRTA1Q5VZB9 504 aa6.13□□□□□ -1.43
GYPA-201ENST00000324022 EHMT2Q96KQ7 1210 aa6.13□□□□□ -1.43
GYPA-201ENST00000324022 PSEN1P49768 467 aa6.1□□□□□ -1.43
GYPA-201ENST00000324022 PLCD3Q8N3E9 789 aa6.1□□□□□ -1.43
GYPA-201ENST00000324022 PSDA5PKW4 1024 aaPredicted RBP6.08□□□□□ -1.44
GYPA-201ENST00000324022 PSEN2P49810 448 aa6.08□□□□□ -1.44
GYPA-201ENST00000324022 MICALL2Q8IY33 904 aa6.06□□□□□ -1.44
GYPA-201ENST00000324022 PROM2Q8N271 834 aa6.06□□□□□ -1.44
GYPA-201ENST00000324022 KRTAP4-8Q9BYQ9 185 aa6.06□□□□□ -1.44
GYPA-201ENST00000324022 WIPF1O43516 503 aa6.05□□□□□ -1.44
GYPA-201ENST00000324022 CABP2Q9NPB3 220 aa6.03□□□□□ -1.44
GYPA-201ENST00000324022 GOLGA8CPA6NN73 597 aa6.02□□□□□ -1.45
GYPA-201ENST00000324022 POTECB2RU33 542 aa6.02□□□□□ -1.45
GYPA-201ENST00000324022 WFS1O76024 890 aa6.02□□□□□ -1.45
GYPA-201ENST00000324022 WNT2BQ93097 391 aa6.02□□□□□ -1.45
GYPA-201ENST00000324022 KCNC4Q03721 635 aa6□□□□□ -1.45
GYPA-201ENST00000324022 PRKD2Q9BZL6 878 aa6□□□□□ -1.45
GYPA-201ENST00000324022 PDZRN3Q9UPQ7 1066 aa6□□□□□ -1.45
GYPA-201ENST00000324022 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.99□□□□□ -1.45
GYPA-201ENST00000324022 VPS9D1Q9Y2B5 631 aa5.99□□□□□ -1.45
GYPA-201ENST00000324022 FAM181BA6NEQ2 426 aa5.98□□□□□ -1.45
GYPA-201ENST00000324022 PDAP1Q13442 181 aaKnown RBP5.96□□□□□ -1.46
GYPA-201ENST00000324022 KCNH8Q96L42 1107 aa5.96□□□□□ -1.46
GYPA-201ENST00000324022 KRTAP9-2Q9BYQ4 174 aa5.96□□□□□ -1.46
GYPA-201ENST00000324022 PCDHGA4Q9Y5G9 962 aa5.96□□□□□ -1.46
GYPA-201ENST00000324022 KRTAP1-3Q8IUG1 177 aa5.95□□□□□ -1.46
GYPA-201ENST00000324022 V9GY48 417 aaPredicted RBP5.95□□□□□ -1.46
GYPA-201ENST00000324022 XP32Q5T750 250 aa5.94□□□□□ -1.46
GYPA-201ENST00000324022 KRTAP9-6A0A140TA67 174 aa5.93□□□□□ -1.46
GYPA-201ENST00000324022 ANO8Q9HCE9 1232 aaPredicted RBP5.92□□□□□ -1.46
GYPA-201ENST00000324022 BHMG1C9JSJ3 638 aaPredicted RBP5.91□□□□□ -1.46
GYPA-201ENST00000324022 MRPL50Q8N5N7 158 aaKnown RBP5.91□□□□□ -1.46
GYPA-201ENST00000324022 SLC34A2O95436 690 aa5.9□□□□□ -1.46
GYPA-201ENST00000324022 MYT1Q01538 1121 aa5.9□□□□□ -1.46
GYPA-201ENST00000324022 KCNK17Q96T54 332 aa5.9□□□□□ -1.46
GYPA-201ENST00000324022 PPP4R3BQ5MIZ7 849 aa5.89□□□□□ -1.47
GYPA-201ENST00000324022 NYAP1Q6ZVC0 841 aa5.88□□□□□ -1.47
GYPA-201ENST00000324022 SLC4A5Q9BY07 1137 aa5.88□□□□□ -1.47
GYPA-201ENST00000324022 CHRM1P11229 460 aaPredicted RBP5.87□□□□□ -1.47
GYPA-201ENST00000324022 NFX1Q12986 1120 aaKnown RBP5.87□□□□□ -1.47
GYPA-201ENST00000324022 PKDCCQ504Y2 493 aa5.86□□□□□ -1.47
GYPA-201ENST00000324022 PSMG3-AS1Q96PY0 264 aa5.86□□□□□ -1.47
GYPA-201ENST00000324022 DGAT1O75907 488 aa5.84□□□□□ -1.47
GYPA-201ENST00000324022 EFCAB3Q8N7B9 438 aa5.81□□□□□ -1.48
GYPA-201ENST00000324022 NBPF3Q9H094 633 aa5.81□□□□□ -1.48
GYPA-201ENST00000324022 GSE1Q14687 1217 aa5.8□□□□□ -1.48
GYPA-201ENST00000324022 ANKK1Q8NFD2 765 aa5.8□□□□□ -1.48
GYPA-201ENST00000324022 KDM4FA0A1W2PPD8 638 aa5.79□□□□□ -1.48
GYPA-201ENST00000324022 KCTD17Q8N5Z5 321 aa5.77□□□□□ -1.49
GYPA-201ENST00000324022 KIF3CO14782 793 aa5.76□□□□□ -1.49
GYPA-201ENST00000324022 LCE3BQ5TA77 95 aa5.75□□□□□ -1.49
GYPA-201ENST00000324022 C2orf72A6NCS6 295 aa5.74□□□□□ -1.49
GYPA-201ENST00000324022 BCAMP50895 628 aa5.74□□□□□ -1.49
GYPA-201ENST00000324022 LCE2CQ5TA81 110 aa5.73□□□□□ -1.49
GYPA-201ENST00000324022 PPP1R18Q6NYC8 613 aa5.73□□□□□ -1.49
GYPA-201ENST00000324022 ZSCAN1Q8NBB4 408 aa5.73□□□□□ -1.49
GYPA-201ENST00000324022 SOWAHBA6NEL2 793 aa5.72□□□□□ -1.49
GYPA-201ENST00000324022 MS4A4AQ96JQ5 239 aa5.72□□□□□ -1.49
GYPA-201ENST00000324022 ZBED2Q9BTP6 218 aa5.72□□□□□ -1.49
GYPA-201ENST00000324022 WBP1LQ9NX94 342 aa5.72□□□□□ -1.49
GYPA-201ENST00000324022 TRIM67Q6ZTA4 783 aa5.71□□□□□ -1.5
GYPA-201ENST00000324022 BTBD11A6QL63 1104 aa5.7□□□□□ -1.5
GYPA-201ENST00000324022 AAASQ9NRG9 546 aa5.7□□□□□ -1.5
GYPA-201ENST00000324022 SOX12O15370 315 aa5.69□□□□□ -1.5
GYPA-201ENST00000324022 ST8SIA5O15466 376 aa5.69□□□□□ -1.5
GYPA-201ENST00000324022 KRTAP4-8A0A0G2JLE6 195 aa5.68□□□□□ -1.5
GYPA-201ENST00000324022 C11orf95C9JLR9 678 aaPredicted RBP5.68□□□□□ -1.5
GYPA-201ENST00000324022 BCL2L12Q9HB09 334 aa5.68□□□□□ -1.5
GYPA-201ENST00000324022 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.68□□□□□ -1.5
GYPA-201ENST00000324022 FAM187AA6NFU0 413 aa5.67□□□□□ -1.5
GYPA-201ENST00000324022 TERTO14746 1132 aaKnown RBP5.67□□□□□ -1.5
GYPA-201ENST00000324022 LORP23490 312 aaPredicted RBP5.66□□□□□ -1.5
GYPA-201ENST00000324022 PTPREP23469 700 aa5.65□□□□□ -1.5
GYPA-201ENST00000324022 KCNMA1Q12791 1236 aa5.65□□□□□ -1.5
GYPA-201ENST00000324022 PTCD2Q8WV60 388 aaKnown RBP5.65□□□□□ -1.5
GYPA-201ENST00000324022 KRTAP9-9Q9BYP9 154 aa5.65□□□□□ -1.5
GYPA-201ENST00000324022 KRTAP9-4Q9BYQ2 154 aa5.65□□□□□ -1.5
GYPA-201ENST00000324022 PRR20EP86478 221 aa5.64□□□□□ -1.51
GYPA-201ENST00000324022 PRR20CP86479 221 aa5.64□□□□□ -1.51
GYPA-201ENST00000324022 PRR20DP86480 221 aa5.64□□□□□ -1.51
GYPA-201ENST00000324022 PRR20BP86481 221 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms