RNA–Protein interactions for RNA: ENST00000323871.9

PXN-203, Transcript of paxillin, humanhuman

TSL 2

Gene PXN, Length 5,457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-203ENST00000323871 SAFB2Q14151 953 aaKnown RBP eCLIP22.86■■□□□ 1.25
PXN-203ENST00000323871 SOX12O15370 315 aa22.86■■□□□ 1.25
PXN-203ENST00000323871 CSB-PGBD3P0DP91 1061 aa22.85■■□□□ 1.25
PXN-203ENST00000323871 FGD1P98174 961 aa22.85■■□□□ 1.25
PXN-203ENST00000323871 CFAP44Q96MT7 982 aa22.85■■□□□ 1.25
PXN-203ENST00000323871 RTN4Q9NQC3 1192 aaKnown RBP22.84■■□□□ 1.25
PXN-203ENST00000323871 NUP155O75694 1391 aa22.83■■□□□ 1.25
PXN-203ENST00000323871 PAK3O75914 559 aaPredicted RBP22.83■■□□□ 1.25
PXN-203ENST00000323871 KCNJ4P48050 445 aa22.83■■□□□ 1.25
PXN-203ENST00000323871 CCDC18Q5T9S5 1454 aa22.82■■□□□ 1.24
PXN-203ENST00000323871 KTN1Q86UP2 1357 aaKnown RBP22.81■■□□□ 1.24
PXN-203ENST00000323871 RAPGEF2Q9Y4G8 1499 aa22.81■■□□□ 1.24
PXN-203ENST00000323871 SPAG9O60271 1321 aaKnown RBP22.81■■□□□ 1.24
PXN-203ENST00000323871 ABCC8Q09428 1581 aa22.81■■□□□ 1.24
PXN-203ENST00000323871 KIF3BO15066 747 aa22.8■■□□□ 1.24
PXN-203ENST00000323871 ROCK2O75116 1388 aaKnown RBP22.79■■□□□ 1.24
PXN-203ENST00000323871 TRIM44Q96DX7 344 aaPredicted RBP22.78■■□□□ 1.24
PXN-203ENST00000323871 TMX4Q9H1E5 349 aaPredicted RBP22.77■■□□□ 1.24
PXN-203ENST00000323871 WASHC2CQ9Y4E1 1318 aa22.76■■□□□ 1.23
PXN-203ENST00000323871 IPO8O15397 1037 aaKnown RBP22.75■■□□□ 1.23
PXN-203ENST00000323871 MCCP23508 829 aa22.75■■□□□ 1.23
PXN-203ENST00000323871 PPP4R2Q9NY27 417 aa22.75■■□□□ 1.23
PXN-203ENST00000323871 TERF2IPQ9NYB0 399 aa22.74■■□□□ 1.23
PXN-203ENST00000323871 SUPT16HQ9Y5B9 1047 aaKnown RBP22.74■■□□□ 1.23
PXN-203ENST00000323871 JPH4Q96JJ6 628 aa22.73■■□□□ 1.23
PXN-203ENST00000323871 MPHOSPH9Q99550 1183 aa22.73■■□□□ 1.23
PXN-203ENST00000323871 HSPA5P11021 654 aaKnown RBP22.7■■□□□ 1.22
PXN-203ENST00000323871 GOLGA6L6A8MZA4 724 aa22.7■■□□□ 1.22
PXN-203ENST00000323871 SENP3-EIF4A1A0A087X0R7 540 aa22.7■■□□□ 1.22
PXN-203ENST00000323871 PTMAP06454 111 aaKnown RBP22.7■■□□□ 1.22
PXN-203ENST00000323871 CCDC9Q9Y3X0 531 aaKnown RBP22.69■■□□□ 1.22
PXN-203ENST00000323871 RALBP1Q15311 655 aa22.69■■□□□ 1.22
PXN-203ENST00000323871 HDAC5Q9UQL6 1122 aa22.68■■□□□ 1.22
PXN-203ENST00000323871 NAP1L2Q9ULW6 460 aaPredicted RBP22.68■■□□□ 1.22
PXN-203ENST00000323871 RGS3P49796 1198 aa22.68■■□□□ 1.22
PXN-203ENST00000323871 HSP90AB1P08238 724 aaKnown RBP22.68■■□□□ 1.22
PXN-203ENST00000323871 CCER2I3L3R5 266 aa22.67■■□□□ 1.22
PXN-203ENST00000323871 TULP1O00294 542 aaPredicted RBP22.67■■□□□ 1.22
PXN-203ENST00000323871 HNRNPMP52272 730 aaKnown RBP eCLIP22.67■■□□□ 1.222e-6■■■■□ 25
PXN-203ENST00000323871 ATAD2BQ9ULI0 1458 aa22.66■■□□□ 1.22
PXN-203ENST00000323871 NGDNQ8NEJ9 315 aaKnown RBP22.64■■□□□ 1.21
PXN-203ENST00000323871 UACAQ9BZF9 1416 aa22.64■■□□□ 1.21
PXN-203ENST00000323871 U2AF1L5P0DN76 240 aaPredicted RBP22.64■■□□□ 1.21
PXN-203ENST00000323871 U2AF1Q01081 240 aaKnown RBP eCLIP22.64■■□□□ 1.21
PXN-203ENST00000323871 OSCARQ8IYS5 282 aa22.63■■□□□ 1.21
PXN-203ENST00000323871 FANCD2Q9BXW9 1451 aa22.62■■□□□ 1.21
PXN-203ENST00000323871 KANK4Q5T7N3 995 aaPredicted RBP22.62■■□□□ 1.21
PXN-203ENST00000323871 FHOD3Q2V2M9 1422 aa22.61■■□□□ 1.21
PXN-203ENST00000323871 PTPRGP23470 1445 aa22.61■■□□□ 1.21
PXN-203ENST00000323871 STK31Q9BXU1 1019 aa22.6■■□□□ 1.21
PXN-203ENST00000323871 NRDCO43847 1150 aa22.59■■□□□ 1.21
PXN-203ENST00000323871 DEKP35659 375 aaKnown RBP22.59■■□□□ 1.21
PXN-203ENST00000323871 LMOD3Q0VAK6 560 aa22.59■■□□□ 1.21
PXN-203ENST00000323871 GOLGA6L4A6NEF3 574 aa22.58■■□□□ 1.21
PXN-203ENST00000323871 WIZO95785 1651 aa22.58■■□□□ 1.2
PXN-203ENST00000323871 FOXD1Q16676 465 aa22.58■■□□□ 1.2
PXN-203ENST00000323871 ERICH6BQ5W0A0 696 aa22.57■■□□□ 1.2
PXN-203ENST00000323871 HSCBQ8IWL3 235 aa22.57■■□□□ 1.2
PXN-203ENST00000323871 TAOK2Q9UL54 1235 aa22.57■■□□□ 1.2
PXN-203ENST00000323871 RAB3GAP2Q9H2M9 1393 aa22.57■■□□□ 1.2
PXN-203ENST00000323871 ISY1Q9ULR0 285 aaKnown RBP22.57■■□□□ 1.2
PXN-203ENST00000323871 ZNF330Q9Y3S2 320 aaPredicted RBP22.56■■□□□ 1.2
PXN-203ENST00000323871 KIAA1211Q6ZU35 1233 aa22.55■■□□□ 1.2
PXN-203ENST00000323871 TPRNQ4KMQ1 711 aa22.54■■□□□ 1.2
PXN-203ENST00000323871 SMARCA4P51532 1647 aa22.54■■□□□ 1.2
PXN-203ENST00000323871 AMPHP49418 695 aa22.54■■□□□ 1.2
PXN-203ENST00000323871 NAP1L5Q96NT1 182 aaPredicted RBP22.51■■□□□ 1.19
PXN-203ENST00000323871 GPATCH3Q96I76 525 aa22.51■■□□□ 1.19
PXN-203ENST00000323871 VGFO15240 615 aaPredicted RBP22.49■■□□□ 1.19
PXN-203ENST00000323871 GNL2Q13823 731 aaKnown RBP22.49■■□□□ 1.19
PXN-203ENST00000323871 TAF7LQ5H9L4 462 aa22.49■■□□□ 1.19
PXN-203ENST00000323871 RWDD1Q9H446 243 aaPredicted RBP22.49■■□□□ 1.19
PXN-203ENST00000323871 GORABQ5T7V8 394 aa22.48■■□□□ 1.19
PXN-203ENST00000323871 CYB5RLQ6IPT4 315 aa22.48■■□□□ 1.19
PXN-203ENST00000323871 CCDC144AA2RUR9 1427 aa22.47■■□□□ 1.19
PXN-203ENST00000323871 DNTTIP2Q5QJE6 756 aaKnown RBP22.46■■□□□ 1.19
PXN-203ENST00000323871 HMMRO75330 724 aa22.46■■□□□ 1.19
PXN-203ENST00000323871 G3V3G9 751 aa22.45■■□□□ 1.18
PXN-203ENST00000323871 DCAF8Q5TAQ9 597 aa22.45■■□□□ 1.18
PXN-203ENST00000323871 ITPRIPQ8IWB1 547 aa22.45■■□□□ 1.18
PXN-203ENST00000323871 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.44■■□□□ 1.18
PXN-203ENST00000323871 PHLDB1Q86UU1 1377 aa22.43■■□□□ 1.18
PXN-203ENST00000323871 NUTM2DQ5VT03 806 aaPredicted RBP22.43■■□□□ 1.18
PXN-203ENST00000323871 CLSTN1O94985 981 aa22.42■■□□□ 1.18
PXN-203ENST00000323871 PLCB2Q00722 1185 aa22.41■■□□□ 1.18
PXN-203ENST00000323871 NOP58Q9Y2X3 529 aaKnown RBP22.4■■□□□ 1.18
PXN-203ENST00000323871 CHMP3Q9Y3E7 222 aa22.4■■□□□ 1.18
PXN-203ENST00000323871 PMFBP1Q8TBY8 1022 aa22.4■■□□□ 1.18
PXN-203ENST00000323871 HTATSF1O43719 755 aaKnown RBP22.39■■□□□ 1.18
PXN-203ENST00000323871 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.39■■□□□ 1.17
PXN-203ENST00000323871 EVC2Q86UK5 1308 aa22.38■■□□□ 1.17
PXN-203ENST00000323871 L3MBTL2Q969R5 705 aa22.37■■□□□ 1.17
PXN-203ENST00000323871 APBB1O00213 710 aa22.37■■□□□ 1.17
PXN-203ENST00000323871 RCAN3Q9UKA8 241 aa22.37■■□□□ 1.17
PXN-203ENST00000323871 TRAK1Q9UPV9 953 aa22.37■■□□□ 1.17
PXN-203ENST00000323871 GAPVD1Q14C86 1478 aa22.37■■□□□ 1.17
PXN-203ENST00000323871 L1TD1Q5T7N2 865 aaKnown RBP22.36■■□□□ 1.17
PXN-203ENST00000323871 COG3Q96JB2 828 aa22.36■■□□□ 1.17
PXN-203ENST00000323871 GTF2E1P29083 439 aaPredicted RBP22.36■■□□□ 1.17
PXN-203ENST00000323871 AEBP2Q6ZN18 517 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms