RNA–Protein interactions for RNA: ENST00000323578.12

CHID1-201, Transcript of chitinase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHID1, Length 3,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-201ENST00000323578 RGL3Q3MIN7 710 aa21.95■■□□□ 1.1
CHID1-201ENST00000323578 SUPT6HQ7KZ85 1726 aaKnown RBP21.94■■□□□ 1.1
CHID1-201ENST00000323578 PPP4R2Q9NY27 417 aa21.93■■□□□ 1.1
CHID1-201ENST00000323578 EPRSP07814 1512 aaKnown RBP21.92■■□□□ 1.1
CHID1-201ENST00000323578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.92■■□□□ 1.1
CHID1-201ENST00000323578 TMC1Q8TDI8 760 aa21.92■■□□□ 1.1
CHID1-201ENST00000323578 EHBP1L1Q8N3D4 1523 aa21.9■■□□□ 1.1
CHID1-201ENST00000323578 CNTLNQ9NXG0 1405 aa21.9■■□□□ 1.1
CHID1-201ENST00000323578 LRRIQ1Q96JM4 1722 aa21.89■■□□□ 1.09
CHID1-201ENST00000323578 CARD11Q9BXL7 1154 aa21.88■■□□□ 1.09
CHID1-201ENST00000323578 THOC2Q8NI27 1593 aaKnown RBP21.88■■□□□ 1.09
CHID1-201ENST00000323578 NBR1Q14596 966 aa21.88■■□□□ 1.09
CHID1-201ENST00000323578 DENND4BO75064 1496 aaPredicted RBP21.87■■□□□ 1.09
CHID1-201ENST00000323578 UGGT2Q9NYU1 1516 aa21.87■■□□□ 1.09
CHID1-201ENST00000323578 PRG4Q92954 1404 aaPredicted RBP21.86■■□□□ 1.09
CHID1-201ENST00000323578 DCAF11Q8TEB1 546 aa21.86■■□□□ 1.09
CHID1-201ENST00000323578 CCDC136Q96JN2 1154 aa21.85■■□□□ 1.09
CHID1-201ENST00000323578 ZNF608Q9ULD9 1512 aaPredicted RBP21.84■■□□□ 1.09
CHID1-201ENST00000323578 HNRNPMP52272 730 aaKnown RBP eCLIP21.83■■□□□ 1.092e-7■■■■□ 25.4
CHID1-201ENST00000323578 ANKRD30BQ9BXX2 1392 aa21.83■■□□□ 1.09
CHID1-201ENST00000323578 LAMC3Q9Y6N6 1575 aa21.82■■□□□ 1.08
CHID1-201ENST00000323578 NPM2Q86SE8 214 aaKnown RBP21.81■■□□□ 1.08
CHID1-201ENST00000323578 KDM5BQ9UGL1 1544 aa21.81■■□□□ 1.08
CHID1-201ENST00000323578 AKNAQ7Z591 1439 aa21.81■■□□□ 1.08
CHID1-201ENST00000323578 ABCC5O15440 1437 aa21.8■■□□□ 1.08
CHID1-201ENST00000323578 DAPK1P53355 1430 aa21.8■■□□□ 1.08
CHID1-201ENST00000323578 ST20-MTHFSA0A0A6YYL1 179 aa21.8■■□□□ 1.08
CHID1-201ENST00000323578 SAMD9Q5K651 1589 aa21.79■■□□□ 1.08
CHID1-201ENST00000323578 PLEKHD1A6NEE1 506 aa21.78■■□□□ 1.08
CHID1-201ENST00000323578 TSPY4P0CV99 314 aa21.78■■□□□ 1.08
CHID1-201ENST00000323578 TSPY10P0CW01 314 aa21.78■■□□□ 1.08
CHID1-201ENST00000323578 NUP155O75694 1391 aa21.78■■□□□ 1.08
CHID1-201ENST00000323578 USP47Q96K76 1375 aa21.77■■□□□ 1.08
CHID1-201ENST00000323578 ZBED9Q6R2W3 1325 aa21.77■■□□□ 1.08
CHID1-201ENST00000323578 ABCA5Q8WWZ7 1642 aa21.76■■□□□ 1.07
CHID1-201ENST00000323578 IQGAP2Q13576 1575 aa21.75■■□□□ 1.07
CHID1-201ENST00000323578 NCOA1Q15788 1441 aa21.75■■□□□ 1.07
CHID1-201ENST00000323578 KIF21AQ7Z4S6 1674 aa21.75■■□□□ 1.07
CHID1-201ENST00000323578 JPH4Q96JJ6 628 aa21.73■■□□□ 1.07
CHID1-201ENST00000323578 HECW1Q76N89 1606 aa21.72■■□□□ 1.07
CHID1-201ENST00000323578 CC2D1BQ5T0F9 858 aaKnown RBP21.72■■□□□ 1.07
CHID1-201ENST00000323578 MIA2Q96PC5 1412 aa21.71■■□□□ 1.07
CHID1-201ENST00000323578 PLB1Q6P1J6 1458 aa21.71■■□□□ 1.07
CHID1-201ENST00000323578 RPRD2Q5VT52 1461 aaKnown RBP21.68■■□□□ 1.06
CHID1-201ENST00000323578 NUDCQ9Y266 331 aa21.67■■□□□ 1.06
CHID1-201ENST00000323578 TCOF1Q13428 1488 aaKnown RBP21.66■■□□□ 1.06
CHID1-201ENST00000323578 PAK3O75914 559 aaPredicted RBP21.65■■□□□ 1.06
CHID1-201ENST00000323578 NUP153P49790 1475 aaKnown RBP21.63■■□□□ 1.05
CHID1-201ENST00000323578 NBPF1Q3BBV0 1214 aa21.63■■□□□ 1.05
CHID1-201ENST00000323578 ANKRD30AQ9BXX3 1397 aa21.62■■□□□ 1.05
CHID1-201ENST00000323578 PLIN1O60240 522 aa21.62■■□□□ 1.05
CHID1-201ENST00000323578 SKAP1Q86WV1 359 aa21.62■■□□□ 1.05
CHID1-201ENST00000323578 MYT1LQ9UL68 1186 aa21.62■■□□□ 1.05
CHID1-201ENST00000323578 FANCIQ9NVI1 1328 aa21.62■■□□□ 1.05
CHID1-201ENST00000323578 ARHGEF11O15085 1522 aa21.61■■□□□ 1.05
CHID1-201ENST00000323578 WDR62O43379 1518 aa21.61■■□□□ 1.05
CHID1-201ENST00000323578 PNISRQ8TF01 805 aaKnown RBP21.61■■□□□ 1.05
CHID1-201ENST00000323578 TARBP1Q13395 1621 aaKnown RBP21.6■■□□□ 1.05
CHID1-201ENST00000323578 ERCC6Q03468 1493 aa21.6■■□□□ 1.05
CHID1-201ENST00000323578 ANKRD50Q9ULJ7 1429 aa21.59■■□□□ 1.05
CHID1-201ENST00000323578 EXOC6Q8TAG9 804 aa21.59■■□□□ 1.05
CHID1-201ENST00000323578 CDCA7LQ96GN5 454 aa21.58■■□□□ 1.05
CHID1-201ENST00000323578 TEX14Q8IWB6 1497 aa21.58■■□□□ 1.05
CHID1-201ENST00000323578 ROCK2O75116 1388 aaKnown RBP21.57■■□□□ 1.04
CHID1-201ENST00000323578 CAMSAP2Q08AD1 1489 aa21.57■■□□□ 1.04
CHID1-201ENST00000323578 ROCK1Q13464 1354 aa21.56■■□□□ 1.04
CHID1-201ENST00000323578 ANP32AP39687 249 aaKnown RBP21.55■■□□□ 1.04
CHID1-201ENST00000323578 KIAA1107Q9UPP5 1409 aa21.55■■□□□ 1.04
CHID1-201ENST00000323578 NOP58Q9Y2X3 529 aaKnown RBP21.55■■□□□ 1.04
CHID1-201ENST00000323578 DISP1Q96F81 1524 aa21.55■■□□□ 1.04
CHID1-201ENST00000323578 MRC2Q9UBG0 1479 aa21.54■■□□□ 1.04
CHID1-201ENST00000323578 SPATA31E1Q6ZUB1 1445 aa21.54■■□□□ 1.04
CHID1-201ENST00000323578 DHX29Q7Z478 1369 aaKnown RBP21.54■■□□□ 1.04
CHID1-201ENST00000323578 PZPP20742 1482 aa21.54■■□□□ 1.04
CHID1-201ENST00000323578 TROQ12816 1431 aaPredicted RBP21.54■■□□□ 1.04
CHID1-201ENST00000323578 ERICH6BQ5W0A0 696 aa21.53■■□□□ 1.04
CHID1-201ENST00000323578 KIAA0586Q9BVV6 1533 aa21.53■■□□□ 1.04
CHID1-201ENST00000323578 GCC2Q8IWJ2 1684 aa21.53■■□□□ 1.04
CHID1-201ENST00000323578 SENP3Q9H4L4 574 aaPredicted RBP21.53■■□□□ 1.04
CHID1-201ENST00000323578 ADAMTS12P58397 1594 aa21.51■■□□□ 1.03
CHID1-201ENST00000323578 GPATCH8Q9UKJ3 1502 aaKnown RBP21.51■■□□□ 1.03
CHID1-201ENST00000323578 PBRM1Q86U86 1689 aa21.5■■□□□ 1.03
CHID1-201ENST00000323578 DEKP35659 375 aaKnown RBP21.49■■□□□ 1.03
CHID1-201ENST00000323578 ZBTB47Q9UFB7 747 aaPredicted RBP21.48■■□□□ 1.03
CHID1-201ENST00000323578 RCAN3Q9UKA8 241 aa21.48■■□□□ 1.03
CHID1-201ENST00000323578 KIF15Q9NS87 1388 aa21.48■■□□□ 1.03
CHID1-201ENST00000323578 LAS1LQ9Y4W2 734 aaKnown RBP21.48■■□□□ 1.03
CHID1-201ENST00000323578 GRIN2AQ12879 1464 aa21.47■■□□□ 1.03
CHID1-201ENST00000323578 ANO8Q9HCE9 1232 aaPredicted RBP21.46■■□□□ 1.03
CHID1-201ENST00000323578 PANK3Q9H999 370 aa21.46■■□□□ 1.03
CHID1-201ENST00000323578 CARMIL2Q6F5E8 1435 aa21.45■■□□□ 1.02
CHID1-201ENST00000323578 MYBBP1AQ9BQG0 1328 aaKnown RBP21.44■■□□□ 1.02
CHID1-201ENST00000323578 KIF14Q15058 1648 aa21.44■■□□□ 1.02
CHID1-201ENST00000323578 KIAA0556O60303 1618 aa21.43■■□□□ 1.02
CHID1-201ENST00000323578 C9orf84Q5VXU9 1444 aa21.43■■□□□ 1.02
CHID1-201ENST00000323578 SMG6Q86US8 1419 aaKnown RBP21.43■■□□□ 1.02
CHID1-201ENST00000323578 DNMT1P26358 1616 aaKnown RBP21.42■■□□□ 1.02
CHID1-201ENST00000323578 RAPGEF6Q8TEU7 1601 aa21.42■■□□□ 1.02
CHID1-201ENST00000323578 RRP1P56182 461 aaKnown RBP21.42■■□□□ 1.02
CHID1-201ENST00000323578 RTL5Q5HYW3 569 aaPredicted RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms