RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 CASC1Q6TDU7 716 aa16■□□□□ 0.15
CACNA1F-201ENST00000323022 CCDC136Q96JN2 1154 aa16■□□□□ 0.15
CACNA1F-201ENST00000323022 EFCAB2Q5VUJ9 269 aa16■□□□□ 0.15
CACNA1F-201ENST00000323022 MROH2BQ7Z745 1585 aa15.99■□□□□ 0.15
CACNA1F-201ENST00000323022 KRI1Q8N9T8 703 aaKnown RBP15.99■□□□□ 0.15
CACNA1F-201ENST00000323022 CEP164Q9UPV0 1460 aa15.99■□□□□ 0.15
CACNA1F-201ENST00000323022 MYO15BQ96JP2 1530 aa15.97■□□□□ 0.15
CACNA1F-201ENST00000323022 SMARCA2P51531 1590 aa15.97■□□□□ 0.15
CACNA1F-201ENST00000323022 TAF7LQ5H9L4 462 aa15.97■□□□□ 0.15
CACNA1F-201ENST00000323022 FRAT1Q92837 279 aaPredicted RBP15.97■□□□□ 0.15
CACNA1F-201ENST00000323022 PIP4K2BP78356 416 aa15.96■□□□□ 0.15
CACNA1F-201ENST00000323022 TDRD9Q8NDG6 1382 aaKnown RBP15.96■□□□□ 0.15
CACNA1F-201ENST00000323022 NCLP19338 710 aaKnown RBP15.96■□□□□ 0.15
CACNA1F-201ENST00000323022 FRAT2O75474 233 aaPredicted RBP15.95■□□□□ 0.14
CACNA1F-201ENST00000323022 NBR1Q14596 966 aa15.95■□□□□ 0.14
CACNA1F-201ENST00000323022 PNNQ9H307 717 aaKnown RBP15.94■□□□□ 0.14
CACNA1F-201ENST00000323022 MORC1Q86VD1 984 aa15.93■□□□□ 0.14
CACNA1F-201ENST00000323022 PRM3Q9NNZ6 103 aa15.93■□□□□ 0.14
CACNA1F-201ENST00000323022 CUX2O14529 1486 aa15.93■□□□□ 0.14
CACNA1F-201ENST00000323022 IRX6P78412 446 aaPredicted RBP15.93■□□□□ 0.14
CACNA1F-201ENST00000323022 CCDC88BA6NC98 1476 aa15.93■□□□□ 0.14
CACNA1F-201ENST00000323022 TNIKQ9UKE5 1360 aa15.91■□□□□ 0.14
CACNA1F-201ENST00000323022 AMPHP49418 695 aa15.91■□□□□ 0.14
CACNA1F-201ENST00000323022 FBXW7Q969H0 707 aa15.91■□□□□ 0.14
CACNA1F-201ENST00000323022 CWC22Q9HCG8 908 aaKnown RBP15.9■□□□□ 0.14
CACNA1F-201ENST00000323022 GORABQ5T7V8 394 aa15.9■□□□□ 0.14
CACNA1F-201ENST00000323022 NUTM2BA6NNL0 878 aaPredicted RBP15.89■□□□□ 0.13
CACNA1F-201ENST00000323022 NUTM2EB1AL46 878 aaPredicted RBP15.89■□□□□ 0.13
CACNA1F-201ENST00000323022 NUTM2AQ8IVF1 878 aaPredicted RBP15.89■□□□□ 0.13
CACNA1F-201ENST00000323022 FOXD1Q16676 465 aa15.89■□□□□ 0.13
CACNA1F-201ENST00000323022 CARMIL1Q5VZK9 1371 aa15.88■□□□□ 0.13
CACNA1F-201ENST00000323022 TMF1P82094 1093 aa15.88■□□□□ 0.13
CACNA1F-201ENST00000323022 HNRNPMP52272 730 aaKnown RBP eCLIP15.87■□□□□ 0.13
CACNA1F-201ENST00000323022 APBB1O00213 710 aa15.87■□□□□ 0.13
CACNA1F-201ENST00000323022 ATF3P18847 181 aa15.86■□□□□ 0.13
CACNA1F-201ENST00000323022 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.86■□□□□ 0.13
CACNA1F-201ENST00000323022 SOGA1O94964 1423 aa15.85■□□□□ 0.13
CACNA1F-201ENST00000323022 SPAG9O60271 1321 aaKnown RBP15.85■□□□□ 0.13
CACNA1F-201ENST00000323022 ANP32EQ9BTT0 268 aa15.84■□□□□ 0.13
CACNA1F-201ENST00000323022 VPS53Q5VIR6 699 aa15.83■□□□□ 0.12
CACNA1F-201ENST00000323022 RAD21O60216 631 aa15.82■□□□□ 0.12
CACNA1F-201ENST00000323022 WIZO95785 1651 aa15.82■□□□□ 0.12
CACNA1F-201ENST00000323022 GOLGA6L22H0YM25 854 aa15.81■□□□□ 0.12
CACNA1F-201ENST00000323022 ABCC8Q09428 1581 aa15.81■□□□□ 0.12
CACNA1F-201ENST00000323022 BECN1Q14457 450 aa15.81■□□□□ 0.12
CACNA1F-201ENST00000323022 GNL2Q13823 731 aaKnown RBP15.8■□□□□ 0.12
CACNA1F-201ENST00000323022 PSME1Q06323 249 aa15.8■□□□□ 0.12
CACNA1F-201ENST00000323022 TRIM44Q96DX7 344 aaPredicted RBP15.79■□□□□ 0.12
CACNA1F-201ENST00000323022 JPH4Q96JJ6 628 aa15.78■□□□□ 0.12
CACNA1F-201ENST00000323022 NGEFQ8N5V2 710 aa15.78■□□□□ 0.12
CACNA1F-201ENST00000323022 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
CACNA1F-201ENST00000323022 CTDP1Q9Y5B0 961 aaPredicted RBP15.78■□□□□ 0.12
CACNA1F-201ENST00000323022 USP35Q9P2H5 1018 aa15.77■□□□□ 0.12
CACNA1F-201ENST00000323022 PKD2Q13563 968 aa15.77■□□□□ 0.12
CACNA1F-201ENST00000323022 TRIM34Q9BYJ4 488 aa15.77■□□□□ 0.11
CACNA1F-201ENST00000323022 PTMAP06454 111 aaKnown RBP15.76■□□□□ 0.11
CACNA1F-201ENST00000323022 FHAD1B1AJZ9 1412 aa15.75■□□□□ 0.11
CACNA1F-201ENST00000323022 ANO8Q9HCE9 1232 aaPredicted RBP15.75■□□□□ 0.11
CACNA1F-201ENST00000323022 CNKSR2Q8WXI2 1034 aa15.74■□□□□ 0.11
CACNA1F-201ENST00000323022 SAMD1Q6SPF0 538 aaPredicted RBP15.73■□□□□ 0.11
CACNA1F-201ENST00000323022 U2AF1L5P0DN76 240 aaPredicted RBP15.73■□□□□ 0.11
CACNA1F-201ENST00000323022 U2AF1Q01081 240 aaKnown RBP eCLIP15.73■□□□□ 0.11
CACNA1F-201ENST00000323022 C1orf141Q5JVX7 400 aa15.73■□□□□ 0.11
CACNA1F-201ENST00000323022 TOMM22Q9NS69 142 aa15.73■□□□□ 0.11
CACNA1F-201ENST00000323022 DDRGK1Q96HY6 314 aa15.73■□□□□ 0.11
CACNA1F-201ENST00000323022 SIN3AQ96ST3 1273 aa15.72■□□□□ 0.11
CACNA1F-201ENST00000323022 CADPSQ9ULU8 1353 aa15.71■□□□□ 0.11
CACNA1F-201ENST00000323022 PLCB2Q00722 1185 aa15.71■□□□□ 0.11
CACNA1F-201ENST00000323022 CHMP4BQ9H444 224 aaKnown RBP15.71■□□□□ 0.1
CACNA1F-201ENST00000323022 TRAK1Q9UPV9 953 aa15.7■□□□□ 0.1
CACNA1F-201ENST00000323022 PDE4CQ08493 712 aa15.7■□□□□ 0.1
CACNA1F-201ENST00000323022 STK31Q9BXU1 1019 aa15.7■□□□□ 0.1
CACNA1F-201ENST00000323022 ATAD2BQ9ULI0 1458 aa15.69■□□□□ 0.1
CACNA1F-201ENST00000323022 TERF2IPQ9NYB0 399 aa15.69■□□□□ 0.1
CACNA1F-201ENST00000323022 NUP155O75694 1391 aa15.68■□□□□ 0.1
CACNA1F-201ENST00000323022 SMARCA4P51532 1647 aa15.68■□□□□ 0.1
CACNA1F-201ENST00000323022 TTC5Q8N0Z6 440 aa15.67■□□□□ 0.1
CACNA1F-201ENST00000323022 DNTTIP2Q5QJE6 756 aaKnown RBP15.67■□□□□ 0.1
CACNA1F-201ENST00000323022 SLC4A10Q6U841 1118 aa15.67■□□□□ 0.1
CACNA1F-201ENST00000323022 RGS3P49796 1198 aa15.66■□□□□ 0.1
CACNA1F-201ENST00000323022 MIER1Q8N108 512 aa15.65■□□□□ 0.1
CACNA1F-201ENST00000323022 MARCH6O60337 910 aa15.65■□□□□ 0.1
CACNA1F-201ENST00000323022 STRN4Q9NRL3 753 aa15.65■□□□□ 0.1
CACNA1F-201ENST00000323022 NUTM2GQ5VZR2 741 aa15.64■□□□□ 0.09
CACNA1F-201ENST00000323022 PROSER2Q86WR7 435 aaPredicted RBP15.64■□□□□ 0.09
CACNA1F-201ENST00000323022 GOLGA6L6A8MZA4 724 aa15.63■□□□□ 0.09
CACNA1F-201ENST00000323022 NOL10Q9BSC4 688 aaKnown RBP15.63■□□□□ 0.09
CACNA1F-201ENST00000323022 TCEAL9Q9UHQ7 104 aa15.63■□□□□ 0.09
CACNA1F-201ENST00000323022 GOLGA6L4A6NEF3 574 aa15.62■□□□□ 0.09
CACNA1F-201ENST00000323022 WWC1Q8IX03 1113 aa15.62■□□□□ 0.09
CACNA1F-201ENST00000323022 MS4A1P11836 297 aa15.62■□□□□ 0.09
CACNA1F-201ENST00000323022 ROCK2O75116 1388 aaKnown RBP15.62■□□□□ 0.09
CACNA1F-201ENST00000323022 PTPRGP23470 1445 aa15.62■□□□□ 0.09
CACNA1F-201ENST00000323022 VPS37DQ86XT2 251 aa15.61■□□□□ 0.09
CACNA1F-201ENST00000323022 RBM33Q96EV2 1170 aaKnown RBP15.61■□□□□ 0.09
CACNA1F-201ENST00000323022 MINK1Q8N4C8 1332 aaPredicted RBP15.61■□□□□ 0.09
CACNA1F-201ENST00000323022 KIAA1211Q6ZU35 1233 aa15.6■□□□□ 0.09
CACNA1F-201ENST00000323022 RASSF8Q8NHQ8 419 aa15.59■□□□□ 0.09
CACNA1F-201ENST00000323022 CCAR1Q8IX12 1150 aaKnown RBP15.59■□□□□ 0.09
CACNA1F-201ENST00000323022 PAXIP1Q6ZW49 1069 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms