RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 NUP155O75694 1391 aa21.61■■□□□ 1.05
SFXN1-201ENST00000321442 PTPRGP23470 1445 aa21.6■■□□□ 1.05
SFXN1-201ENST00000321442 SAFB2Q14151 953 aaKnown RBP eCLIP21.6■■□□□ 1.05
SFXN1-201ENST00000321442 TOP2BQ02880 1626 aa21.59■■□□□ 1.05
SFXN1-201ENST00000321442 DDRGK1Q96HY6 314 aa21.58■■□□□ 1.05
SFXN1-201ENST00000321442 PRXQ9BXM0 1461 aa21.58■■□□□ 1.04
SFXN1-201ENST00000321442 PPM1GO15355 546 aaPredicted RBP21.58■■□□□ 1.04
SFXN1-201ENST00000321442 L3MBTL2Q969R5 705 aa21.57■■□□□ 1.04
SFXN1-201ENST00000321442 NUTM2DQ5VT03 806 aaPredicted RBP21.57■■□□□ 1.04
SFXN1-201ENST00000321442 EFCAB2Q5VUJ9 269 aa21.56■■□□□ 1.04
SFXN1-201ENST00000321442 KIF3BO15066 747 aa21.55■■□□□ 1.04
SFXN1-201ENST00000321442 CC2D1BQ5T0F9 858 aaKnown RBP21.54■■□□□ 1.04
SFXN1-201ENST00000321442 TNNT2P45379 298 aaPredicted RBP21.54■■□□□ 1.04
SFXN1-201ENST00000321442 ERICH6BQ5W0A0 696 aa21.49■■□□□ 1.03
SFXN1-201ENST00000321442 NEUROD2Q15784 382 aa21.48■■□□□ 1.03
SFXN1-201ENST00000321442 OSCARQ8IYS5 282 aa21.48■■□□□ 1.03
SFXN1-201ENST00000321442 ANP32BQ92688 251 aaKnown RBP21.45■■□□□ 1.02
SFXN1-201ENST00000321442 GRIN2BQ13224 1484 aa21.44■■□□□ 1.02
SFXN1-201ENST00000321442 CCDC18Q5T9S5 1454 aa21.44■■□□□ 1.02
SFXN1-201ENST00000321442 MRC2Q9UBG0 1479 aa21.43■■□□□ 1.02
SFXN1-201ENST00000321442 STK26Q9P289 416 aa21.43■■□□□ 1.02
SFXN1-201ENST00000321442 IPO9Q96P70 1041 aaKnown RBP21.42■■□□□ 1.02
SFXN1-201ENST00000321442 KNSTRNQ9Y448 316 aa21.42■■□□□ 1.02
SFXN1-201ENST00000321442 ANKRD30AQ9BXX3 1397 aa21.41■■□□□ 1.02
SFXN1-201ENST00000321442 SPAG9O60271 1321 aaKnown RBP21.41■■□□□ 1.02
SFXN1-201ENST00000321442 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.41■■□□□ 1.02
SFXN1-201ENST00000321442 BECN1Q14457 450 aa21.4■■□□□ 1.02
SFXN1-201ENST00000321442 LRRC9Q6ZRR7 1453 aa21.4■■□□□ 1.02
SFXN1-201ENST00000321442 PEG3Q9GZU2 1588 aa21.39■■□□□ 1.01
SFXN1-201ENST00000321442 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.01
SFXN1-201ENST00000321442 RCAN3Q9UKA8 241 aa21.38■■□□□ 1.01
SFXN1-201ENST00000321442 ZBTB7CA1YPR0 619 aa21.38■■□□□ 1.01
SFXN1-201ENST00000321442 PRKRIP1Q9H875 184 aaPredicted RBP21.38■■□□□ 1.01
SFXN1-201ENST00000321442 NUDCQ9Y266 331 aa21.38■■□□□ 1.01
SFXN1-201ENST00000321442 URB2Q14146 1524 aaKnown RBP21.38■■□□□ 1.01
SFXN1-201ENST00000321442 SNAPC4Q5SXM2 1469 aa21.38■■□□□ 1.01
SFXN1-201ENST00000321442 FRAT1Q92837 279 aaPredicted RBP21.38■■□□□ 1.01
SFXN1-201ENST00000321442 PRDM2Q13029 1718 aa21.37■■□□□ 1.01
SFXN1-201ENST00000321442 AFAP1Q8N556 730 aa21.37■■□□□ 1.01
SFXN1-201ENST00000321442 GLIPR1L2Q4G1C9 344 aa21.37■■□□□ 1.01
SFXN1-201ENST00000321442 C14orf37Q86TY3 774 aa21.37■■□□□ 1.01
SFXN1-201ENST00000321442 FGD6Q6ZV73 1430 aa21.35■■□□□ 1.01
SFXN1-201ENST00000321442 FANCIQ9NVI1 1328 aa21.35■■□□□ 1.01
SFXN1-201ENST00000321442 DNMBPQ6XZF7 1577 aa21.34■■□□□ 1.01
SFXN1-201ENST00000321442 PRG4Q92954 1404 aaPredicted RBP21.33■■□□□ 1
SFXN1-201ENST00000321442 ERICH3Q5RHP9 1530 aa21.33■■□□□ 1
SFXN1-201ENST00000321442 SOX12O15370 315 aa21.31■■□□□ 1
SFXN1-201ENST00000321442 POGKQ9P215 609 aa21.31■■□□□ 1
SFXN1-201ENST00000321442 NCOA2Q15596 1464 aa21.29■■□□□ 1
SFXN1-201ENST00000321442 CASKIN1Q8WXD9 1431 aa21.28■■□□□ 1
SFXN1-201ENST00000321442 TCERG1O14776 1098 aaKnown RBP21.28■■□□□ 1
SFXN1-201ENST00000321442 SPRYD3Q8NCJ5 442 aa21.27■■□□□ 1
SFXN1-201ENST00000321442 MYOM3Q5VTT5 1437 aa21.27■■□□□ 1
SFXN1-201ENST00000321442 WASHC2CQ9Y4E1 1318 aa21.26■□□□□ 0.99
SFXN1-201ENST00000321442 ABCA10Q8WWZ4 1543 aa21.26■□□□□ 0.99
SFXN1-201ENST00000321442 SLC4A3P48751 1232 aa21.25■□□□□ 0.99
SFXN1-201ENST00000321442 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
SFXN1-201ENST00000321442 TRIM44Q96DX7 344 aaPredicted RBP21.25■□□□□ 0.99
SFXN1-201ENST00000321442 KANK1Q14678 1352 aa21.24■□□□□ 0.99
SFXN1-201ENST00000321442 ST20-MTHFSA0A0A6YYL1 179 aa21.23■□□□□ 0.99
SFXN1-201ENST00000321442 PLIN1O60240 522 aa21.23■□□□□ 0.99
SFXN1-201ENST00000321442 NAP1L5Q96NT1 182 aaPredicted RBP21.23■□□□□ 0.99
SFXN1-201ENST00000321442 EXOC6Q8TAG9 804 aa21.22■□□□□ 0.99
SFXN1-201ENST00000321442 ZBED9Q6R2W3 1325 aa21.22■□□□□ 0.99
SFXN1-201ENST00000321442 SLKQ9H2G2 1235 aaPredicted RBP21.22■□□□□ 0.99
SFXN1-201ENST00000321442 CDK13Q14004 1512 aaKnown RBP21.22■□□□□ 0.99
SFXN1-201ENST00000321442 ROCK2O75116 1388 aaKnown RBP21.21■□□□□ 0.99
SFXN1-201ENST00000321442 NUTM2FA1L443 756 aa21.21■□□□□ 0.99
SFXN1-201ENST00000321442 FAM69CQ0P6D2 419 aa21.2■□□□□ 0.98
SFXN1-201ENST00000321442 LMOD2Q6P5Q4 547 aa21.2■□□□□ 0.98
SFXN1-201ENST00000321442 LAMC3Q9Y6N6 1575 aa21.2■□□□□ 0.98
SFXN1-201ENST00000321442 SRPK2P78362 688 aaKnown RBP21.19■□□□□ 0.98
SFXN1-201ENST00000321442 PDE4AP27815 886 aa21.18■□□□□ 0.98
SFXN1-201ENST00000321442 FTSJ3Q8IY81 847 aaKnown RBP21.18■□□□□ 0.98
SFXN1-201ENST00000321442 TMF1P82094 1093 aa21.17■□□□□ 0.98
SFXN1-201ENST00000321442 TRAK1Q9UPV9 953 aa21.17■□□□□ 0.98
SFXN1-201ENST00000321442 NCLP19338 710 aaKnown RBP21.16■□□□□ 0.98
SFXN1-201ENST00000321442 WASHC2AQ641Q2 1341 aa21.16■□□□□ 0.98
SFXN1-201ENST00000321442 PLB1Q6P1J6 1458 aa21.15■□□□□ 0.98
SFXN1-201ENST00000321442 CDCA8Q53HL2 280 aa21.15■□□□□ 0.98
SFXN1-201ENST00000321442 KTN1Q86UP2 1357 aaKnown RBP21.14■□□□□ 0.97
SFXN1-201ENST00000321442 KIF15Q9NS87 1388 aa21.14■□□□□ 0.97
SFXN1-201ENST00000321442 CCDC184Q52MB2 194 aa21.14■□□□□ 0.97
SFXN1-201ENST00000321442 PAK3O75914 559 aaPredicted RBP21.13■□□□□ 0.97
SFXN1-201ENST00000321442 GZF1Q9H116 711 aaPredicted RBP21.13■□□□□ 0.97
SFXN1-201ENST00000321442 RALBP1Q15311 655 aa21.12■□□□□ 0.97
SFXN1-201ENST00000321442 RSPH4AQ5TD94 716 aa21.12■□□□□ 0.97
SFXN1-201ENST00000321442 MSH5O43196 834 aa21.11■□□□□ 0.97
SFXN1-201ENST00000321442 FYCO1Q9BQS8 1478 aa21.1■□□□□ 0.97
SFXN1-201ENST00000321442 U2SURPO15042 1029 aaKnown RBP21.1■□□□□ 0.97
SFXN1-201ENST00000321442 NLRP13Q86W25 1043 aa21.1■□□□□ 0.97
SFXN1-201ENST00000321442 RAPGEF3O95398 923 aa21.09■□□□□ 0.97
SFXN1-201ENST00000321442 RRBP1Q9P2E9 1410 aaKnown RBP21.09■□□□□ 0.97
SFXN1-201ENST00000321442 A0A0G2JS52 829 aa21.08■□□□□ 0.97
SFXN1-201ENST00000321442 TPRNQ4KMQ1 711 aa21.07■□□□□ 0.96
SFXN1-201ENST00000321442 CFAP53Q96M91 514 aa21.07■□□□□ 0.96
SFXN1-201ENST00000321442 RRP1P56182 461 aaKnown RBP21.06■□□□□ 0.96
SFXN1-201ENST00000321442 MYH16Q9H6N6 1097 aa21.06■□□□□ 0.96
SFXN1-201ENST00000321442 TIAM1Q13009 1591 aa21.05■□□□□ 0.96
SFXN1-201ENST00000321442 ANKRD50Q9ULJ7 1429 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 179.1 ms