RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 TROQ12816 1431 aaPredicted RBP10.93□□□□□ -0.66
IFT88-201ENST00000319980 PLEKHD1A6NEE1 506 aa10.92□□□□□ -0.66
IFT88-201ENST00000319980 TRIM52Q96A61 297 aa10.92□□□□□ -0.66
IFT88-201ENST00000319980 CFDP1Q9UEE9 299 aaPredicted RBP10.92□□□□□ -0.66
IFT88-201ENST00000319980 TIMELESSQ9UNS1 1208 aa10.92□□□□□ -0.66
IFT88-201ENST00000319980 ADCY10Q96PN6 1610 aa10.91□□□□□ -0.66
IFT88-201ENST00000319980 ZNF777Q9ULD5 760 aaPredicted RBP10.91□□□□□ -0.66
IFT88-201ENST00000319980 UHRF1BP1LA0JNW5 1464 aa10.91□□□□□ -0.66
IFT88-201ENST00000319980 PTPRGP23470 1445 aa10.9□□□□□ -0.66
IFT88-201ENST00000319980 PPP1R15AO75807 674 aaPredicted RBP10.88□□□□□ -0.67
IFT88-201ENST00000319980 DAPK1P53355 1430 aa10.88□□□□□ -0.67
IFT88-201ENST00000319980 ATP10BO94823 1461 aa10.88□□□□□ -0.67
IFT88-201ENST00000319980 ABCC5O15440 1437 aa10.88□□□□□ -0.67
IFT88-201ENST00000319980 TONSLQ96HA7 1378 aa10.88□□□□□ -0.67
IFT88-201ENST00000319980 AMER1Q5JTC6 1135 aaPredicted RBP10.87□□□□□ -0.67
IFT88-201ENST00000319980 AKNAQ7Z591 1439 aa10.87□□□□□ -0.67
IFT88-201ENST00000319980 GLI2P10070 1586 aa10.87□□□□□ -0.67
IFT88-201ENST00000319980 GPATCH8Q9UKJ3 1502 aaKnown RBP10.87□□□□□ -0.67
IFT88-201ENST00000319980 YTHDC1Q96MU7 727 aaKnown RBP10.87□□□□□ -0.67
IFT88-201ENST00000319980 ABCA8O94911 1581 aa10.86□□□□□ -0.67
IFT88-201ENST00000319980 DIP2BQ9P265 1576 aa10.86□□□□□ -0.67
IFT88-201ENST00000319980 CENPBP07199 599 aaPredicted RBP10.86□□□□□ -0.67
IFT88-201ENST00000319980 MPHOSPH9Q99550 1183 aa10.86□□□□□ -0.67
IFT88-201ENST00000319980 ABCC10Q5T3U5 1492 aa10.85□□□□□ -0.67
IFT88-201ENST00000319980 ROCK1Q13464 1354 aa10.85□□□□□ -0.67
IFT88-201ENST00000319980 ACIN1Q9UKV3 1341 aaKnown RBP10.84□□□□□ -0.67
IFT88-201ENST00000319980 KIF14Q15058 1648 aa10.84□□□□□ -0.67
IFT88-201ENST00000319980 CAMSAP2Q08AD1 1489 aa10.83□□□□□ -0.67
IFT88-201ENST00000319980 FOXD1Q16676 465 aa10.83□□□□□ -0.68
IFT88-201ENST00000319980 KDM6BO15054 1643 aa10.83□□□□□ -0.68
IFT88-201ENST00000319980 HIRIP3Q9BW71 556 aaPredicted RBP10.83□□□□□ -0.68
IFT88-201ENST00000319980 DNMT1P26358 1616 aaKnown RBP10.82□□□□□ -0.68
IFT88-201ENST00000319980 SCAF1Q9H7N4 1312 aaKnown RBP10.82□□□□□ -0.68
IFT88-201ENST00000319980 GCC2Q8IWJ2 1684 aa10.81□□□□□ -0.68
IFT88-201ENST00000319980 DENND4BO75064 1496 aaPredicted RBP10.81□□□□□ -0.68
IFT88-201ENST00000319980 SLC4A1APQ9BWU0 796 aaKnown RBP10.81□□□□□ -0.68
IFT88-201ENST00000319980 ABCC2Q92887 1545 aa10.8□□□□□ -0.68
IFT88-201ENST00000319980 NCOA1Q15788 1441 aa10.8□□□□□ -0.68
IFT88-201ENST00000319980 KDM5BQ9UGL1 1544 aa10.79□□□□□ -0.68
IFT88-201ENST00000319980 PPRC1Q5VV67 1664 aaKnown RBP10.78□□□□□ -0.68
IFT88-201ENST00000319980 ITSN2Q9NZM3 1697 aa10.78□□□□□ -0.68
IFT88-201ENST00000319980 TSPY4P0CV99 314 aa10.78□□□□□ -0.68
IFT88-201ENST00000319980 TSPY10P0CW01 314 aa10.78□□□□□ -0.68
IFT88-201ENST00000319980 HNRNPMP52272 730 aaKnown RBP eCLIP10.78□□□□□ -0.68
IFT88-201ENST00000319980 DDX10Q13206 875 aaKnown RBP10.78□□□□□ -0.68
IFT88-201ENST00000319980 ANKRD30AQ9BXX3 1397 aa10.77□□□□□ -0.68
IFT88-201ENST00000319980 MAP3K4Q9Y6R4 1608 aa10.77□□□□□ -0.69
IFT88-201ENST00000319980 KCNH8Q96L42 1107 aa10.76□□□□□ -0.69
IFT88-201ENST00000319980 L3MBTL2Q969R5 705 aa10.75□□□□□ -0.69
IFT88-201ENST00000319980 ANKRD30BQ9BXX2 1392 aa10.75□□□□□ -0.69
IFT88-201ENST00000319980 ZCCHC11Q5TAX3 1644 aaKnown RBP10.74□□□□□ -0.69
IFT88-201ENST00000319980 C9orf84Q5VXU9 1444 aa10.74□□□□□ -0.69
IFT88-201ENST00000319980 ANKRD50Q9ULJ7 1429 aa10.74□□□□□ -0.69
IFT88-201ENST00000319980 ADGRL2O95490 1459 aa10.73□□□□□ -0.69
IFT88-201ENST00000319980 CDC42BPAQ5VT25 1732 aa10.73□□□□□ -0.69
IFT88-201ENST00000319980 GTF3C3Q9Y5Q9 886 aa10.72□□□□□ -0.69
IFT88-201ENST00000319980 PKD2Q13563 968 aa10.71□□□□□ -0.69
IFT88-201ENST00000319980 PZPP20742 1482 aa10.71□□□□□ -0.7
IFT88-201ENST00000319980 MBD5Q9P267 1494 aa10.71□□□□□ -0.7
IFT88-201ENST00000319980 TRHP20396 242 aaPredicted RBP10.7□□□□□ -0.7
IFT88-201ENST00000319980 RSPH4AQ5TD94 716 aa10.7□□□□□ -0.7
IFT88-201ENST00000319980 NUP155O75694 1391 aa10.7□□□□□ -0.7
IFT88-201ENST00000319980 KIF15Q9NS87 1388 aa10.7□□□□□ -0.7
IFT88-201ENST00000319980 RPRD2Q5VT52 1461 aaKnown RBP10.7□□□□□ -0.7
IFT88-201ENST00000319980 SHANK2Q9UPX8 1470 aa10.69□□□□□ -0.7
IFT88-201ENST00000319980 CROCC2H7BZ55 1655 aa10.68□□□□□ -0.7
IFT88-201ENST00000319980 ADGBQ8N7X0 1667 aa10.68□□□□□ -0.7
IFT88-201ENST00000319980 ARHGAP5Q13017 1502 aa10.68□□□□□ -0.7
IFT88-201ENST00000319980 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.68□□□□□ -0.7
IFT88-201ENST00000319980 CCDC141Q6ZP82 1450 aa10.67□□□□□ -0.7
IFT88-201ENST00000319980 HSPA5P11021 654 aaKnown RBP10.67□□□□□ -0.7
IFT88-201ENST00000319980 EIF4G2P78344 907 aaKnown RBP eCLIP10.67□□□□□ -0.7
IFT88-201ENST00000319980 KIAA1107Q9UPP5 1409 aa10.67□□□□□ -0.7
IFT88-201ENST00000319980 NBPF8Q3BBV2 869 aa10.67□□□□□ -0.7
IFT88-201ENST00000319980 NCBP3Q53F19 620 aaKnown RBP10.67□□□□□ -0.7
IFT88-201ENST00000319980 SAMD9LQ8IVG5 1584 aa10.67□□□□□ -0.7
IFT88-201ENST00000319980 TTC37Q6PGP7 1564 aa10.66□□□□□ -0.7
IFT88-201ENST00000319980 ASXL2Q76L83 1435 aa10.66□□□□□ -0.7
IFT88-201ENST00000319980 PREX2Q70Z35 1606 aa10.65□□□□□ -0.7
IFT88-201ENST00000319980 ARHGEF5Q12774 1597 aa10.65□□□□□ -0.7
IFT88-201ENST00000319980 CDC42BPBQ9Y5S2 1711 aa10.65□□□□□ -0.7
IFT88-201ENST00000319980 EFCAB2Q5VUJ9 269 aa10.65□□□□□ -0.7
IFT88-201ENST00000319980 SYCP2Q9BX26 1530 aa10.65□□□□□ -0.71
IFT88-201ENST00000319980 TEX14Q8IWB6 1497 aa10.64□□□□□ -0.71
IFT88-201ENST00000319980 ANP32CO43423 234 aa10.64□□□□□ -0.71
IFT88-201ENST00000319980 NPM1P06748 294 aaKnown RBP eCLIP10.64□□□□□ -0.71
IFT88-201ENST00000319980 WDR7Q9Y4E6 1490 aa10.63□□□□□ -0.71
IFT88-201ENST00000319980 PLCH2O75038 1416 aa10.63□□□□□ -0.71
IFT88-201ENST00000319980 ZNF326Q5BKZ1 582 aaKnown RBP10.63□□□□□ -0.71
IFT88-201ENST00000319980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.63□□□□□ -0.71
IFT88-201ENST00000319980 WASHC2AQ641Q2 1341 aa10.62□□□□□ -0.71
IFT88-201ENST00000319980 ABCA9Q8IUA7 1624 aa10.62□□□□□ -0.71
IFT88-201ENST00000319980 PLEKHH2Q8IVE3 1493 aa10.61□□□□□ -0.71
IFT88-201ENST00000319980 ARHGEF12Q9NZN5 1544 aa10.6□□□□□ -0.71
IFT88-201ENST00000319980 TSPOAP1O95153 1857 aa10.6□□□□□ -0.71
IFT88-201ENST00000319980 C11orf95C9JLR9 678 aaPredicted RBP10.59□□□□□ -0.71
IFT88-201ENST00000319980 AFAP1Q8N556 730 aa10.59□□□□□ -0.71
IFT88-201ENST00000319980 MYO5CQ9NQX4 1742 aa10.58□□□□□ -0.72
IFT88-201ENST00000319980 FAM69CQ0P6D2 419 aa10.58□□□□□ -0.72
IFT88-201ENST00000319980 KDM2AQ9Y2K7 1162 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms