RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 EFCAB5A4FU69 1503 aa4.94□□□□□ -1.62
GEN1-201ENST00000317402 C20orf194Q5TEA3 1177 aa4.94□□□□□ -1.62
GEN1-201ENST00000317402 MAPKBP1O60336 1514 aa4.94□□□□□ -1.62
GEN1-201ENST00000317402 WASHC2AQ641Q2 1341 aa4.94□□□□□ -1.62
GEN1-201ENST00000317402 ATAD2BQ9ULI0 1458 aa4.94□□□□□ -1.62
GEN1-201ENST00000317402 AMER1Q5JTC6 1135 aaPredicted RBP4.93□□□□□ -1.62
GEN1-201ENST00000317402 MYH6P13533 1939 aa4.93□□□□□ -1.62
GEN1-201ENST00000317402 SPRYD3Q8NCJ5 442 aa4.93□□□□□ -1.62
GEN1-201ENST00000317402 LAMC3Q9Y6N6 1575 aa4.92□□□□□ -1.62
GEN1-201ENST00000317402 MAP1BP46821 2468 aaKnown RBP4.92□□□□□ -1.62
GEN1-201ENST00000317402 RP1P56715 2156 aa4.92□□□□□ -1.62
GEN1-201ENST00000317402 A0A0U1RQG5 324 aaPredicted RBP4.92□□□□□ -1.62
GEN1-201ENST00000317402 CUX2O14529 1486 aa4.92□□□□□ -1.62
GEN1-201ENST00000317402 FBLN1P23142 703 aa4.92□□□□□ -1.62
GEN1-201ENST00000317402 KDM6BO15054 1643 aa4.92□□□□□ -1.62
GEN1-201ENST00000317402 ZBTB7CA1YPR0 619 aa4.91□□□□□ -1.62
GEN1-201ENST00000317402 EXOC6Q8TAG9 804 aa4.91□□□□□ -1.62
GEN1-201ENST00000317402 CITO14578 2027 aa4.91□□□□□ -1.62
GEN1-201ENST00000317402 ARID4BQ4LE39 1312 aaPredicted RBP4.91□□□□□ -1.62
GEN1-201ENST00000317402 CC2D1BQ5T0F9 858 aaKnown RBP4.9□□□□□ -1.62
GEN1-201ENST00000317402 DMRT2Q9Y5R5 561 aa4.9□□□□□ -1.62
GEN1-201ENST00000317402 HNRNPMP52272 730 aaKnown RBP eCLIP4.9□□□□□ -1.62
GEN1-201ENST00000317402 KIF27Q86VH2 1401 aa4.9□□□□□ -1.62
GEN1-201ENST00000317402 CHD4Q14839 1912 aa4.9□□□□□ -1.62
GEN1-201ENST00000317402 MYH3P11055 1940 aa4.9□□□□□ -1.63
GEN1-201ENST00000317402 CFTRP13569 1480 aa4.9□□□□□ -1.63
GEN1-201ENST00000317402 CDK11AQ9UQ88 783 aaPredicted RBP4.9□□□□□ -1.63
GEN1-201ENST00000317402 CTTNBP2Q8WZ74 1663 aa4.89□□□□□ -1.63
GEN1-201ENST00000317402 DEKP35659 375 aaKnown RBP4.89□□□□□ -1.63
GEN1-201ENST00000317402 CCDC146Q8IYE0 955 aa4.89□□□□□ -1.63
GEN1-201ENST00000317402 L3MBTL2Q969R5 705 aa4.89□□□□□ -1.63
GEN1-201ENST00000317402 DNMBPQ6XZF7 1577 aa4.89□□□□□ -1.63
GEN1-201ENST00000317402 FHAD1B1AJZ9 1412 aa4.89□□□□□ -1.63
GEN1-201ENST00000317402 ARHGAP35Q9NRY4 1499 aa4.88□□□□□ -1.63
GEN1-201ENST00000317402 CUX1P39880 1505 aa4.88□□□□□ -1.63
GEN1-201ENST00000317402 MYH1P12882 1939 aa4.88□□□□□ -1.63
GEN1-201ENST00000317402 SCN8AQ9UQD0 1980 aa4.88□□□□□ -1.63
GEN1-201ENST00000317402 TNNT2P45379 298 aaPredicted RBP4.88□□□□□ -1.63
GEN1-201ENST00000317402 SLC4A1APQ9BWU0 796 aaKnown RBP4.88□□□□□ -1.63
GEN1-201ENST00000317402 BRPF3Q9ULD4 1205 aa4.88□□□□□ -1.63
GEN1-201ENST00000317402 DENND4BO75064 1496 aaPredicted RBP4.88□□□□□ -1.63
GEN1-201ENST00000317402 NBPF1Q3BBV0 1214 aa4.88□□□□□ -1.63
GEN1-201ENST00000317402 CDK11BP21127 795 aaKnown RBP4.87□□□□□ -1.63
GEN1-201ENST00000317402 IGF1RP08069 1367 aa4.87□□□□□ -1.63
GEN1-201ENST00000317402 NEFMP07197 916 aa4.87□□□□□ -1.63
GEN1-201ENST00000317402 TIMELESSQ9UNS1 1208 aa4.87□□□□□ -1.63
GEN1-201ENST00000317402 CFAP43Q8NDM7 1665 aa4.87□□□□□ -1.63
GEN1-201ENST00000317402 PDE4DIPQ5VU43 2346 aa4.87□□□□□ -1.63
GEN1-201ENST00000317402 SAFB2Q14151 953 aaKnown RBP eCLIP4.87□□□□□ -1.63
GEN1-201ENST00000317402 VPS8Q8N3P4 1428 aa4.86□□□□□ -1.63
GEN1-201ENST00000317402 MYH13Q9UKX3 1938 aa4.86□□□□□ -1.63
GEN1-201ENST00000317402 SPINK5Q9NQ38 1064 aaPredicted RBP4.86□□□□□ -1.63
GEN1-201ENST00000317402 MYH2Q9UKX2 1941 aa4.86□□□□□ -1.63
GEN1-201ENST00000317402 CARMIL1Q5VZK9 1371 aa4.85□□□□□ -1.63
GEN1-201ENST00000317402 SRCAPQ6ZRS2 3230 aa4.85□□□□□ -1.63
GEN1-201ENST00000317402 ANP32AP39687 249 aaKnown RBP4.85□□□□□ -1.63
GEN1-201ENST00000317402 MRS2Q9HD23 443 aa4.85□□□□□ -1.63
GEN1-201ENST00000317402 CHGAP10645 457 aaKnown RBP4.85□□□□□ -1.63
GEN1-201ENST00000317402 CHAMP1Q96JM3 812 aa4.85□□□□□ -1.63
GEN1-201ENST00000317402 MYH7P12883 1935 aa4.85□□□□□ -1.63
GEN1-201ENST00000317402 PRRC2BQ5JSZ5 2229 aaKnown RBP4.85□□□□□ -1.63
GEN1-201ENST00000317402 EVPLQ92817 2033 aa4.85□□□□□ -1.63
GEN1-201ENST00000317402 TPRNQ4KMQ1 711 aa4.84□□□□□ -1.63
GEN1-201ENST00000317402 CCNB3Q8WWL7 1395 aa4.84□□□□□ -1.63
GEN1-201ENST00000317402 SEC24BO95487 1268 aa4.84□□□□□ -1.64
GEN1-201ENST00000317402 ERICH6BQ5W0A0 696 aa4.84□□□□□ -1.64
GEN1-201ENST00000317402 TCERG1O14776 1098 aaKnown RBP4.84□□□□□ -1.64
GEN1-201ENST00000317402 UTRNP46939 3433 aa4.83□□□□□ -1.64
GEN1-201ENST00000317402 RRP7AQ9Y3A4 280 aaKnown RBP4.83□□□□□ -1.64
GEN1-201ENST00000317402 HAP1P54257 671 aaPredicted RBP4.83□□□□□ -1.64
GEN1-201ENST00000317402 NEUROD2Q15784 382 aa4.83□□□□□ -1.64
GEN1-201ENST00000317402 VSIG10Q8N0Z9 540 aa4.83□□□□□ -1.64
GEN1-201ENST00000317402 RBM33Q96EV2 1170 aaKnown RBP4.83□□□□□ -1.64
GEN1-201ENST00000317402 BCL2L13Q9BXK5 485 aa4.83□□□□□ -1.64
GEN1-201ENST00000317402 ANP32CO43423 234 aa4.83□□□□□ -1.64
GEN1-201ENST00000317402 NCLP19338 710 aaKnown RBP4.82□□□□□ -1.64
GEN1-201ENST00000317402 PDE4CQ08493 712 aa4.82□□□□□ -1.64
GEN1-201ENST00000317402 NAP1L5Q96NT1 182 aaPredicted RBP4.82□□□□□ -1.64
GEN1-201ENST00000317402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.82□□□□□ -1.64
GEN1-201ENST00000317402 HMGB1P1B2RPK0 211 aaPredicted RBP4.82□□□□□ -1.64
GEN1-201ENST00000317402 ARID3AQ99856 593 aa4.82□□□□□ -1.64
GEN1-201ENST00000317402 MYH15Q9Y2K3 1946 aa4.82□□□□□ -1.64
GEN1-201ENST00000317402 FGD5Q6ZNL6 1462 aa4.82□□□□□ -1.64
GEN1-201ENST00000317402 FOXD4L1Q9NU39 408 aa4.81□□□□□ -1.64
GEN1-201ENST00000317402 MAGI3Q5TCQ9 1506 aa4.81□□□□□ -1.64
GEN1-201ENST00000317402 JARID2Q92833 1246 aaPredicted RBP4.81□□□□□ -1.64
GEN1-201ENST00000317402 ABCA10Q8WWZ4 1543 aa4.81□□□□□ -1.64
GEN1-201ENST00000317402 NUTM2FA1L443 756 aa4.81□□□□□ -1.64
GEN1-201ENST00000317402 KIF7Q2M1P5 1343 aa4.81□□□□□ -1.64
GEN1-201ENST00000317402 RBAK-RBAKDNI3L0D1 243 aa4.81□□□□□ -1.64
GEN1-201ENST00000317402 FMN1Q68DA7 1419 aa4.81□□□□□ -1.64
GEN1-201ENST00000317402 ZNF608Q9ULD9 1512 aaPredicted RBP4.81□□□□□ -1.64
GEN1-201ENST00000317402 BCL11BQ9C0K0 894 aaPredicted RBP4.81□□□□□ -1.64
GEN1-201ENST00000317402 FYCO1Q9BQS8 1478 aa4.81□□□□□ -1.64
GEN1-201ENST00000317402 CCDC18Q5T9S5 1454 aa4.8□□□□□ -1.64
GEN1-201ENST00000317402 SCN1AP35498 2009 aa4.8□□□□□ -1.64
GEN1-201ENST00000317402 CDK13Q14004 1512 aaKnown RBP4.8□□□□□ -1.64
GEN1-201ENST00000317402 HEATR1Q9H583 2144 aaKnown RBP4.8□□□□□ -1.64
GEN1-201ENST00000317402 MLECQ14165 292 aa4.8□□□□□ -1.64
GEN1-201ENST00000317402 ATRXP46100 2492 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms