RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 GTF3C3Q9Y5Q9 886 aa11.92□□□□□ -0.5
CTC1-201ENST00000315684 KLHL34Q8N239 644 aa11.92□□□□□ -0.5
CTC1-201ENST00000315684 ARHGAP35Q9NRY4 1499 aa11.91□□□□□ -0.5
CTC1-201ENST00000315684 FKBP8Q14318 412 aa11.9□□□□□ -0.5
CTC1-201ENST00000315684 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.9□□□□□ -0.5
CTC1-201ENST00000315684 EVA1CP58658 441 aa11.89□□□□□ -0.51
CTC1-201ENST00000315684 PIP4K2BP78356 416 aa11.89□□□□□ -0.51
CTC1-201ENST00000315684 GAPVD1Q14C86 1478 aa11.89□□□□□ -0.51
CTC1-201ENST00000315684 NUDCQ9Y266 331 aa11.89□□□□□ -0.51
CTC1-201ENST00000315684 RAPGEF2Q9Y4G8 1499 aa11.88□□□□□ -0.51
CTC1-201ENST00000315684 TRAK1Q9UPV9 953 aa11.88□□□□□ -0.51
CTC1-201ENST00000315684 FGD5Q6ZNL6 1462 aa11.87□□□□□ -0.51
CTC1-201ENST00000315684 HDGFL2Q7Z4V5 671 aaPredicted RBP11.87□□□□□ -0.51
CTC1-201ENST00000315684 TMF1P82094 1093 aa11.87□□□□□ -0.51
CTC1-201ENST00000315684 MORC1Q86VD1 984 aa11.87□□□□□ -0.51
CTC1-201ENST00000315684 GOLGA2Q08379 1002 aa11.87□□□□□ -0.51
CTC1-201ENST00000315684 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.87□□□□□ -0.51
CTC1-201ENST00000315684 TPRNQ4KMQ1 711 aa11.86□□□□□ -0.51
CTC1-201ENST00000315684 FMN1Q68DA7 1419 aa11.84□□□□□ -0.51
CTC1-201ENST00000315684 OS9Q13438 667 aaPredicted RBP11.84□□□□□ -0.51
CTC1-201ENST00000315684 FRAT1Q92837 279 aaPredicted RBP11.84□□□□□ -0.51
CTC1-201ENST00000315684 RUSC2Q8N2Y8 1516 aa11.84□□□□□ -0.51
CTC1-201ENST00000315684 RTF1Q92541 710 aaKnown RBP11.83□□□□□ -0.52
CTC1-201ENST00000315684 ANKRD30AQ9BXX3 1397 aa11.83□□□□□ -0.52
CTC1-201ENST00000315684 ISY1Q9ULR0 285 aaKnown RBP11.82□□□□□ -0.52
CTC1-201ENST00000315684 FTSJ3Q8IY81 847 aaKnown RBP11.82□□□□□ -0.52
CTC1-201ENST00000315684 SYTL4Q96C24 671 aaPredicted RBP11.82□□□□□ -0.52
CTC1-201ENST00000315684 NUTM2BA6NNL0 878 aaPredicted RBP11.81□□□□□ -0.52
CTC1-201ENST00000315684 NUTM2EB1AL46 878 aaPredicted RBP11.81□□□□□ -0.52
CTC1-201ENST00000315684 NUTM2AQ8IVF1 878 aaPredicted RBP11.81□□□□□ -0.52
CTC1-201ENST00000315684 MPHOSPH9Q99550 1183 aa11.81□□□□□ -0.52
CTC1-201ENST00000315684 ROCK2O75116 1388 aaKnown RBP11.8□□□□□ -0.52
CTC1-201ENST00000315684 CCDC136Q96JN2 1154 aa11.8□□□□□ -0.52
CTC1-201ENST00000315684 AMPHP49418 695 aa11.8□□□□□ -0.52
CTC1-201ENST00000315684 NUTM2GQ5VZR2 741 aa11.79□□□□□ -0.52
CTC1-201ENST00000315684 UPF2Q9HAU5 1272 aaKnown RBP11.79□□□□□ -0.52
CTC1-201ENST00000315684 CCDC18Q5T9S5 1454 aa11.78□□□□□ -0.52
CTC1-201ENST00000315684 MINK1Q8N4C8 1332 aaPredicted RBP11.78□□□□□ -0.52
CTC1-201ENST00000315684 ATF3P18847 181 aa11.78□□□□□ -0.52
CTC1-201ENST00000315684 MIER1Q8N108 512 aa11.77□□□□□ -0.52
CTC1-201ENST00000315684 USP35Q9P2H5 1018 aa11.77□□□□□ -0.53
CTC1-201ENST00000315684 PSME1Q06323 249 aa11.77□□□□□ -0.53
CTC1-201ENST00000315684 PRG4Q92954 1404 aaPredicted RBP11.77□□□□□ -0.53
CTC1-201ENST00000315684 MRC2Q9UBG0 1479 aa11.76□□□□□ -0.53
CTC1-201ENST00000315684 ZNF644Q9H582 1327 aaPredicted RBP11.76□□□□□ -0.53
CTC1-201ENST00000315684 CHMP3Q9Y3E7 222 aa11.75□□□□□ -0.53
CTC1-201ENST00000315684 TMX4Q9H1E5 349 aaPredicted RBP11.75□□□□□ -0.53
CTC1-201ENST00000315684 G3V3G9 751 aa11.75□□□□□ -0.53
CTC1-201ENST00000315684 APBB1O00213 710 aa11.75□□□□□ -0.53
CTC1-201ENST00000315684 DCAF8Q5TAQ9 597 aa11.75□□□□□ -0.53
CTC1-201ENST00000315684 AFAP1Q8N556 730 aa11.75□□□□□ -0.53
CTC1-201ENST00000315684 RAPGEF3O95398 923 aa11.74□□□□□ -0.53
CTC1-201ENST00000315684 NAP1L2Q9ULW6 460 aaPredicted RBP11.74□□□□□ -0.53
CTC1-201ENST00000315684 U2AF1L5P0DN76 240 aaPredicted RBP11.73□□□□□ -0.53
CTC1-201ENST00000315684 U2AF1Q01081 240 aaKnown RBP eCLIP11.73□□□□□ -0.531e-10■■■■□ 19.8
CTC1-201ENST00000315684 ANP32AP39687 249 aaKnown RBP11.73□□□□□ -0.53
CTC1-201ENST00000315684 NGEFQ8N5V2 710 aa11.72□□□□□ -0.53
CTC1-201ENST00000315684 PPP1R1BQ9UD71 204 aaPredicted RBP11.72□□□□□ -0.53
CTC1-201ENST00000315684 SETD5Q9C0A6 1442 aa11.72□□□□□ -0.53
CTC1-201ENST00000315684 GTF2E1P29083 439 aaPredicted RBP11.72□□□□□ -0.53
CTC1-201ENST00000315684 HSPA5P11021 654 aaKnown RBP11.71□□□□□ -0.53
CTC1-201ENST00000315684 VPS8Q8N3P4 1428 aa11.71□□□□□ -0.54
CTC1-201ENST00000315684 SNAPC4Q5SXM2 1469 aa11.7□□□□□ -0.54
CTC1-201ENST00000315684 AMER1Q5JTC6 1135 aaPredicted RBP11.7□□□□□ -0.54
CTC1-201ENST00000315684 PNNQ9H307 717 aaKnown RBP11.69□□□□□ -0.54
CTC1-201ENST00000315684 NCAPD3P42695 1498 aa11.69□□□□□ -0.54
CTC1-201ENST00000315684 ACIN1Q9UKV3 1341 aaKnown RBP11.68□□□□□ -0.54
CTC1-201ENST00000315684 PROSER2Q86WR7 435 aaPredicted RBP11.68□□□□□ -0.54
CTC1-201ENST00000315684 GRIN2BQ13224 1484 aa11.68□□□□□ -0.54
CTC1-201ENST00000315684 ARHGAP5Q13017 1502 aa11.68□□□□□ -0.54
CTC1-201ENST00000315684 TERF2IPQ9NYB0 399 aa11.67□□□□□ -0.54
CTC1-201ENST00000315684 TXNDC2Q86VQ3 553 aa11.67□□□□□ -0.54
CTC1-201ENST00000315684 NCBP3Q53F19 620 aaKnown RBP11.67□□□□□ -0.54
CTC1-201ENST00000315684 RSPH4AQ5TD94 716 aa11.67□□□□□ -0.54
CTC1-201ENST00000315684 CCDC146Q8IYE0 955 aa11.67□□□□□ -0.54
CTC1-201ENST00000315684 IGF1RP08069 1367 aa11.66□□□□□ -0.54
CTC1-201ENST00000315684 RAB3GAP2Q9H2M9 1393 aa11.66□□□□□ -0.54
CTC1-201ENST00000315684 STRN4Q9NRL3 753 aa11.66□□□□□ -0.54
CTC1-201ENST00000315684 ESCO1Q5FWF5 840 aa11.66□□□□□ -0.54
CTC1-201ENST00000315684 TAF7LQ5H9L4 462 aa11.65□□□□□ -0.54
CTC1-201ENST00000315684 TMEM132EQ6IEE7 984 aa11.65□□□□□ -0.54
CTC1-201ENST00000315684 RBM33Q96EV2 1170 aaKnown RBP11.65□□□□□ -0.54
CTC1-201ENST00000315684 VGFO15240 615 aaPredicted RBP11.65□□□□□ -0.55
CTC1-201ENST00000315684 KCNJ4P48050 445 aa11.64□□□□□ -0.55
CTC1-201ENST00000315684 FGD1P98174 961 aa11.63□□□□□ -0.55
CTC1-201ENST00000315684 XPCQ01831 940 aaPredicted RBP11.63□□□□□ -0.55
CTC1-201ENST00000315684 L3MBTL2Q969R5 705 aa11.63□□□□□ -0.55
CTC1-201ENST00000315684 PMFBP1Q8TBY8 1022 aa11.62□□□□□ -0.55
CTC1-201ENST00000315684 NECTIN2Q92692 538 aa11.62□□□□□ -0.55
CTC1-201ENST00000315684 SLC4A10Q6U841 1118 aa11.62□□□□□ -0.55
CTC1-201ENST00000315684 IFT140Q96RY7 1462 aa11.62□□□□□ -0.55
CTC1-201ENST00000315684 CCDC144AA2RUR9 1427 aa11.61□□□□□ -0.55
CTC1-201ENST00000315684 RGS3P49796 1198 aa11.61□□□□□ -0.55
CTC1-201ENST00000315684 SLC26A8Q96RN1 970 aa11.61□□□□□ -0.55
CTC1-201ENST00000315684 EIF3AQ14152 1382 aaKnown RBP11.61□□□□□ -0.55
CTC1-201ENST00000315684 C1orf141Q5JVX7 400 aa11.61□□□□□ -0.55
CTC1-201ENST00000315684 COG3Q96JB2 828 aa11.61□□□□□ -0.55
CTC1-201ENST00000315684 RRP7AQ9Y3A4 280 aaKnown RBP11.61□□□□□ -0.55
CTC1-201ENST00000315684 FBXW7Q969H0 707 aa11.61□□□□□ -0.55
CTC1-201ENST00000315684 FRAT2O75474 233 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms