RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 DAPK1P53355 1430 aa17.84■□□□□ 0.45
RNF4-201ENST00000314289 ABCC5O15440 1437 aa17.84■□□□□ 0.45
RNF4-201ENST00000314289 TONSLQ96HA7 1378 aa17.84■□□□□ 0.45
RNF4-201ENST00000314289 ATP10BO94823 1461 aa17.83■□□□□ 0.45
RNF4-201ENST00000314289 PPP1R15AO75807 674 aaPredicted RBP17.83■□□□□ 0.44
RNF4-201ENST00000314289 GPATCH8Q9UKJ3 1502 aaKnown RBP17.81■□□□□ 0.44
RNF4-201ENST00000314289 MPHOSPH9Q99550 1183 aa17.8■□□□□ 0.44
RNF4-201ENST00000314289 ABCA8O94911 1581 aa17.8■□□□□ 0.44
RNF4-201ENST00000314289 ERCC6L2Q5T890 1561 aa17.8■□□□□ 0.44
RNF4-201ENST00000314289 CAMSAP2Q08AD1 1489 aa17.79■□□□□ 0.44
RNF4-201ENST00000314289 DENND4BO75064 1496 aaPredicted RBP17.77■□□□□ 0.44
RNF4-201ENST00000314289 MYT1Q01538 1121 aa17.76■□□□□ 0.43
RNF4-201ENST00000314289 GCC2Q8IWJ2 1684 aa17.76■□□□□ 0.43
RNF4-201ENST00000314289 DDX10Q13206 875 aaKnown RBP17.76■□□□□ 0.43
RNF4-201ENST00000314289 DNMT1P26358 1616 aaKnown RBP17.75■□□□□ 0.43
RNF4-201ENST00000314289 HNRNPMP52272 730 aaKnown RBP eCLIP17.74■□□□□ 0.436e-9■■■■■ 27.4
RNF4-201ENST00000314289 KCNH8Q96L42 1107 aa17.74■□□□□ 0.43
RNF4-201ENST00000314289 TIMELESSQ9UNS1 1208 aa17.73■□□□□ 0.43
RNF4-201ENST00000314289 SLC4A1APQ9BWU0 796 aaKnown RBP17.73■□□□□ 0.43
RNF4-201ENST00000314289 AKNAQ7Z591 1439 aa17.71■□□□□ 0.43
RNF4-201ENST00000314289 ROCK1Q13464 1354 aa17.69■□□□□ 0.42
RNF4-201ENST00000314289 ITSN2Q9NZM3 1697 aa17.69■□□□□ 0.42
RNF4-201ENST00000314289 ADCY10Q96PN6 1610 aa17.68■□□□□ 0.42
RNF4-201ENST00000314289 ABCC10Q5T3U5 1492 aa17.68■□□□□ 0.42
RNF4-201ENST00000314289 CDC42BPAQ5VT25 1732 aa17.68■□□□□ 0.42
RNF4-201ENST00000314289 NCOA1Q15788 1441 aa17.68■□□□□ 0.42
RNF4-201ENST00000314289 L3MBTL2Q969R5 705 aa17.66■□□□□ 0.42
RNF4-201ENST00000314289 TSPY4P0CV99 314 aa17.64■□□□□ 0.41
RNF4-201ENST00000314289 TSPY10P0CW01 314 aa17.64■□□□□ 0.41
RNF4-201ENST00000314289 SHROOM2Q13796 1616 aa17.63■□□□□ 0.41
RNF4-201ENST00000314289 ANKRD30AQ9BXX3 1397 aa17.62■□□□□ 0.41
RNF4-201ENST00000314289 KDM5BQ9UGL1 1544 aa17.61■□□□□ 0.41
RNF4-201ENST00000314289 C9orf84Q5VXU9 1444 aa17.6■□□□□ 0.41
RNF4-201ENST00000314289 PKD2Q13563 968 aa17.6■□□□□ 0.41
RNF4-201ENST00000314289 ANKRD30BQ9BXX2 1392 aa17.59■□□□□ 0.41
RNF4-201ENST00000314289 ANKRD50Q9ULJ7 1429 aa17.59■□□□□ 0.41
RNF4-201ENST00000314289 PZPP20742 1482 aa17.57■□□□□ 0.4
RNF4-201ENST00000314289 ZNF326Q5BKZ1 582 aaKnown RBP17.57■□□□□ 0.4
RNF4-201ENST00000314289 TTC37Q6PGP7 1564 aa17.56■□□□□ 0.4
RNF4-201ENST00000314289 ABCC2Q92887 1545 aa17.56■□□□□ 0.4
RNF4-201ENST00000314289 CROCC2H7BZ55 1655 aa17.56■□□□□ 0.4
RNF4-201ENST00000314289 NUP155O75694 1391 aa17.56■□□□□ 0.4
RNF4-201ENST00000314289 NBPF8Q3BBV2 869 aa17.55■□□□□ 0.4
RNF4-201ENST00000314289 ADGBQ8N7X0 1667 aa17.55■□□□□ 0.4
RNF4-201ENST00000314289 CDC42BPBQ9Y5S2 1711 aa17.55■□□□□ 0.4
RNF4-201ENST00000314289 CLASP1Q7Z460 1538 aa17.55■□□□□ 0.4
RNF4-201ENST00000314289 HSPA5P11021 654 aaKnown RBP17.55■□□□□ 0.4
RNF4-201ENST00000314289 ARHGAP5Q13017 1502 aa17.54■□□□□ 0.4
RNF4-201ENST00000314289 KIF15Q9NS87 1388 aa17.54■□□□□ 0.4
RNF4-201ENST00000314289 SAMD9LQ8IVG5 1584 aa17.54■□□□□ 0.4
RNF4-201ENST00000314289 ADGRL2O95490 1459 aa17.54■□□□□ 0.4
RNF4-201ENST00000314289 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.53■□□□□ 0.4
RNF4-201ENST00000314289 MBD5Q9P267 1494 aa17.53■□□□□ 0.4
RNF4-201ENST00000314289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.52■□□□□ 0.49e-7■■□□□ 12.4
RNF4-201ENST00000314289 SYCP2Q9BX26 1530 aa17.51■□□□□ 0.39
RNF4-201ENST00000314289 RPRD2Q5VT52 1461 aaKnown RBP17.51■□□□□ 0.39
RNF4-201ENST00000314289 PREX2Q70Z35 1606 aa17.49■□□□□ 0.39
RNF4-201ENST00000314289 EIF4G2P78344 907 aaKnown RBP eCLIP17.48■□□□□ 0.39
RNF4-201ENST00000314289 CCDC141Q6ZP82 1450 aa17.48■□□□□ 0.39
RNF4-201ENST00000314289 ZCCHC11Q5TAX3 1644 aaKnown RBP17.47■□□□□ 0.39
RNF4-201ENST00000314289 KIAA1107Q9UPP5 1409 aa17.47■□□□□ 0.39
RNF4-201ENST00000314289 TEX14Q8IWB6 1497 aa17.45■□□□□ 0.38
RNF4-201ENST00000314289 SHANK2Q9UPX8 1470 aa17.45■□□□□ 0.38
RNF4-201ENST00000314289 WASHC2AQ641Q2 1341 aa17.45■□□□□ 0.38
RNF4-201ENST00000314289 C11orf95C9JLR9 678 aaPredicted RBP17.45■□□□□ 0.38
RNF4-201ENST00000314289 KDM2AQ9Y2K7 1162 aa17.45■□□□□ 0.38
RNF4-201ENST00000314289 ANP32CO43423 234 aa17.44■□□□□ 0.38
RNF4-201ENST00000314289 ARHGEF12Q9NZN5 1544 aa17.43■□□□□ 0.38
RNF4-201ENST00000314289 ARHGEF5Q12774 1597 aa17.42■□□□□ 0.38
RNF4-201ENST00000314289 EFCAB2Q5VUJ9 269 aa17.41■□□□□ 0.38
RNF4-201ENST00000314289 AFAP1Q8N556 730 aa17.41■□□□□ 0.38
RNF4-201ENST00000314289 MYO5CQ9NQX4 1742 aa17.41■□□□□ 0.38
RNF4-201ENST00000314289 RSPH4AQ5TD94 716 aa17.4■□□□□ 0.38
RNF4-201ENST00000314289 CNGB1Q14028 1251 aaPredicted RBP17.39■□□□□ 0.38
RNF4-201ENST00000314289 POLR3GLQ9BT43 218 aa17.39■□□□□ 0.38
RNF4-201ENST00000314289 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
RNF4-201ENST00000314289 PLCH2O75038 1416 aa17.38■□□□□ 0.37
RNF4-201ENST00000314289 MYT1LQ9UL68 1186 aa17.38■□□□□ 0.37
RNF4-201ENST00000314289 RGL3Q3MIN7 710 aa17.38■□□□□ 0.37
RNF4-201ENST00000314289 TRAPPC8Q9Y2L5 1435 aa17.37■□□□□ 0.37
RNF4-201ENST00000314289 UHRF1BP1LA0JNW5 1464 aa17.37■□□□□ 0.37
RNF4-201ENST00000314289 PLEKHH2Q8IVE3 1493 aa17.37■□□□□ 0.37
RNF4-201ENST00000314289 DCAF11Q8TEB1 546 aa17.36■□□□□ 0.37
RNF4-201ENST00000314289 FAM135AQ9P2D6 1515 aa17.33■□□□□ 0.37
RNF4-201ENST00000314289 SUPT16HQ9Y5B9 1047 aaKnown RBP17.33■□□□□ 0.36
RNF4-201ENST00000314289 SPAG9O60271 1321 aaKnown RBP17.31■□□□□ 0.36
RNF4-201ENST00000314289 WDR7Q9Y4E6 1490 aa17.3■□□□□ 0.36
RNF4-201ENST00000314289 CCDC7Q96M83 1385 aa17.29■□□□□ 0.36
RNF4-201ENST00000314289 KIF7Q2M1P5 1343 aa17.29■□□□□ 0.36
RNF4-201ENST00000314289 ASXL2Q76L83 1435 aa17.28■□□□□ 0.36
RNF4-201ENST00000314289 CARD11Q9BXL7 1154 aa17.28■□□□□ 0.36
RNF4-201ENST00000314289 ABCC1P33527 1531 aa17.27■□□□□ 0.36
RNF4-201ENST00000314289 KDM5DQ9BY66 1539 aa17.27■□□□□ 0.36
RNF4-201ENST00000314289 USP47Q96K76 1375 aa17.27■□□□□ 0.36
RNF4-201ENST00000314289 NPM1P06748 294 aaKnown RBP eCLIP17.27■□□□□ 0.36
RNF4-201ENST00000314289 SPATA31E1Q6ZUB1 1445 aa17.26■□□□□ 0.35
RNF4-201ENST00000314289 CCER2I3L3R5 266 aa17.26■□□□□ 0.35
RNF4-201ENST00000314289 CCDC144AA2RUR9 1427 aa17.25■□□□□ 0.35
RNF4-201ENST00000314289 FANCAO15360 1455 aa17.25■□□□□ 0.35
RNF4-201ENST00000314289 CCDC184Q52MB2 194 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms