RNA–Protein interactions for RNA: ENST00000314067.10

IFT43-202, Transcript of intraflagellar transport 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene IFT43, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-202ENST00000314067 LRRIQ1Q96JM4 1722 aa19.08■□□□□ 0.65
IFT43-202ENST00000314067 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.64
IFT43-202ENST00000314067 PLCH2O75038 1416 aa19.06■□□□□ 0.64
IFT43-202ENST00000314067 KIF14Q15058 1648 aa19.05■□□□□ 0.64
IFT43-202ENST00000314067 FMN1Q68DA7 1419 aa19.05■□□□□ 0.64
IFT43-202ENST00000314067 ARHGAP35Q9NRY4 1499 aa19.04■□□□□ 0.64
IFT43-202ENST00000314067 POGZQ7Z3K3 1410 aa19.04■□□□□ 0.64
IFT43-202ENST00000314067 SCAPERQ9BY12 1400 aa19.03■□□□□ 0.64
IFT43-202ENST00000314067 ARHGEF12Q9NZN5 1544 aa19.02■□□□□ 0.64
IFT43-202ENST00000314067 MLECQ14165 292 aa19.02■□□□□ 0.64
IFT43-202ENST00000314067 HSPA2P54652 639 aa19.01■□□□□ 0.63
IFT43-202ENST00000314067 CHIC1Q5VXU3 224 aa19■□□□□ 0.63
IFT43-202ENST00000314067 CDK11AQ9UQ88 783 aaPredicted RBP19■□□□□ 0.63
IFT43-202ENST00000314067 CDC42BPBQ9Y5S2 1711 aa18.98■□□□□ 0.63
IFT43-202ENST00000314067 ATP10AO60312 1499 aa18.97■□□□□ 0.63
IFT43-202ENST00000314067 EFCAB2Q5VUJ9 269 aa18.97■□□□□ 0.63
IFT43-202ENST00000314067 ARHGAP5Q13017 1502 aa18.96■□□□□ 0.63
IFT43-202ENST00000314067 CERKQ8TCT0 537 aa18.95■□□□□ 0.62
IFT43-202ENST00000314067 CLIP1P30622 1438 aa18.93■□□□□ 0.62
IFT43-202ENST00000314067 TROQ12816 1431 aaPredicted RBP18.93■□□□□ 0.62
IFT43-202ENST00000314067 C9orf84Q5VXU9 1444 aa18.93■□□□□ 0.62
IFT43-202ENST00000314067 KDM5CP41229 1560 aa18.93■□□□□ 0.62
IFT43-202ENST00000314067 MYT1LQ9UL68 1186 aa18.92■□□□□ 0.62
IFT43-202ENST00000314067 PREX1Q8TCU6 1659 aa18.91■□□□□ 0.62
IFT43-202ENST00000314067 ZNF518AQ6AHZ1 1483 aa18.9■□□□□ 0.62
IFT43-202ENST00000314067 REREQ9P2R6 1566 aa18.89■□□□□ 0.62
IFT43-202ENST00000314067 PREX2Q70Z35 1606 aa18.89■□□□□ 0.62
IFT43-202ENST00000314067 CDC42BPAQ5VT25 1732 aa18.89■□□□□ 0.61
IFT43-202ENST00000314067 STRCQ7RTU9 1775 aa18.88■□□□□ 0.61
IFT43-202ENST00000314067 AFAP1Q8N556 730 aa18.88■□□□□ 0.61
IFT43-202ENST00000314067 ITSN2Q9NZM3 1697 aa18.88■□□□□ 0.61
IFT43-202ENST00000314067 SETD1BQ9UPS6 1966 aaKnown RBP18.86■□□□□ 0.61
IFT43-202ENST00000314067 ABCA6Q8N139 1617 aa18.85■□□□□ 0.61
IFT43-202ENST00000314067 DIP2CQ9Y2E4 1556 aa18.85■□□□□ 0.61
IFT43-202ENST00000314067 CCDC18Q5T9S5 1454 aa18.84■□□□□ 0.61
IFT43-202ENST00000314067 MLH3Q9UHC1 1453 aa18.84■□□□□ 0.61
IFT43-202ENST00000314067 CEBPAP49715 358 aaPredicted RBP18.84■□□□□ 0.61
IFT43-202ENST00000314067 CASKIN1Q8WXD9 1431 aa18.83■□□□□ 0.61
IFT43-202ENST00000314067 AGLP35573 1532 aa18.83■□□□□ 0.6
IFT43-202ENST00000314067 C3P01024 1663 aa18.82■□□□□ 0.6
IFT43-202ENST00000314067 ABCC1P33527 1531 aa18.81■□□□□ 0.6
IFT43-202ENST00000314067 KIDINS220Q9ULH0 1771 aa18.81■□□□□ 0.6
IFT43-202ENST00000314067 PTPRTO14522 1441 aa18.79■□□□□ 0.6
IFT43-202ENST00000314067 TRAPPC8Q9Y2L5 1435 aa18.78■□□□□ 0.6
IFT43-202ENST00000314067 DMRT2Q9Y5R5 561 aa18.78■□□□□ 0.6
IFT43-202ENST00000314067 FYCO1Q9BQS8 1478 aa18.77■□□□□ 0.59
IFT43-202ENST00000314067 UHRF1BP1Q6BDS2 1440 aa18.76■□□□□ 0.59
IFT43-202ENST00000314067 SUPT6HQ7KZ85 1726 aaKnown RBP18.75■□□□□ 0.59
IFT43-202ENST00000314067 ZNF777Q9ULD5 760 aaPredicted RBP18.75■□□□□ 0.59
IFT43-202ENST00000314067 ESF1Q9H501 851 aaKnown RBP18.74■□□□□ 0.59
IFT43-202ENST00000314067 LTBP4Q8N2S1 1624 aa18.74■□□□□ 0.59
IFT43-202ENST00000314067 SAMD9LQ8IVG5 1584 aa18.73■□□□□ 0.59
IFT43-202ENST00000314067 SYCP2Q9BX26 1530 aa18.7■□□□□ 0.58
IFT43-202ENST00000314067 ILDR2Q71H61 639 aa18.7■□□□□ 0.58
IFT43-202ENST00000314067 IQSEC2Q5JU85 1478 aa18.7■□□□□ 0.58
IFT43-202ENST00000314067 NCOA1Q15788 1441 aa18.69■□□□□ 0.58
IFT43-202ENST00000314067 GPATCH8Q9UKJ3 1502 aaKnown RBP18.68■□□□□ 0.58
IFT43-202ENST00000314067 CNTLNQ9NXG0 1405 aa18.67■□□□□ 0.58
IFT43-202ENST00000314067 HNRNPMP52272 730 aaKnown RBP eCLIP18.67■□□□□ 0.58
IFT43-202ENST00000314067 MROH2AA6NES4 1674 aa18.66■□□□□ 0.58
IFT43-202ENST00000314067 CLTCQ00610 1675 aaKnown RBP18.66■□□□□ 0.58
IFT43-202ENST00000314067 NPATQ14207 1427 aa18.66■□□□□ 0.58
IFT43-202ENST00000314067 SPAG9O60271 1321 aaKnown RBP18.64■□□□□ 0.57
IFT43-202ENST00000314067 SOCS7O14512 581 aa18.63■□□□□ 0.57
IFT43-202ENST00000314067 ATP7AQ04656 1500 aa18.63■□□□□ 0.57
IFT43-202ENST00000314067 INO80Q9ULG1 1556 aaPredicted RBP18.62■□□□□ 0.57
IFT43-202ENST00000314067 ADGBQ8N7X0 1667 aa18.61■□□□□ 0.57
IFT43-202ENST00000314067 CCNB3Q8WWL7 1395 aa18.61■□□□□ 0.57
IFT43-202ENST00000314067 CFDP1Q9UEE9 299 aaPredicted RBP18.61■□□□□ 0.57
IFT43-202ENST00000314067 MTUS2Q5JR59 1369 aa18.6■□□□□ 0.57
IFT43-202ENST00000314067 PLXNC1O60486 1568 aa18.59■□□□□ 0.57
IFT43-202ENST00000314067 PLEKHH2Q8IVE3 1493 aa18.59■□□□□ 0.57
IFT43-202ENST00000314067 KIAA1107Q9UPP5 1409 aa18.59■□□□□ 0.57
IFT43-202ENST00000314067 ZMYM3Q14202 1370 aa18.59■□□□□ 0.57
IFT43-202ENST00000314067 DISP3Q9P2K9 1392 aa18.59■□□□□ 0.57
IFT43-202ENST00000314067 TIAM1Q13009 1591 aa18.57■□□□□ 0.56
IFT43-202ENST00000314067 A2MP01023 1474 aa18.56■□□□□ 0.56
IFT43-202ENST00000314067 PLA2R1Q13018 1463 aa18.56■□□□□ 0.56
IFT43-202ENST00000314067 CAMSAP1Q5T5Y3 1602 aa18.56■□□□□ 0.56
IFT43-202ENST00000314067 TCOF1Q13428 1488 aaKnown RBP18.55■□□□□ 0.56
IFT43-202ENST00000314067 EHBP1L1Q8N3D4 1523 aa18.54■□□□□ 0.56
IFT43-202ENST00000314067 MYO3AQ8NEV4 1616 aa18.54■□□□□ 0.56
IFT43-202ENST00000314067 PTPRKQ15262 1439 aa18.54■□□□□ 0.56
IFT43-202ENST00000314067 ZNF142P52746 1687 aaPredicted RBP18.54■□□□□ 0.56
IFT43-202ENST00000314067 GGT6Q6P531 493 aa18.53■□□□□ 0.56
IFT43-202ENST00000314067 ZNF644Q9H582 1327 aaPredicted RBP18.52■□□□□ 0.56
IFT43-202ENST00000314067 SPATA31D1Q6ZQQ2 1576 aa18.51■□□□□ 0.55
IFT43-202ENST00000314067 PPP6R1Q9UPN7 881 aa18.51■□□□□ 0.55
IFT43-202ENST00000314067 PKD2Q13563 968 aa18.49■□□□□ 0.55
IFT43-202ENST00000314067 CEP162Q5TB80 1403 aa18.48■□□□□ 0.55
IFT43-202ENST00000314067 ZNF335Q9H4Z2 1342 aaPredicted RBP18.48■□□□□ 0.55
IFT43-202ENST00000314067 NCKAP5LQ9HCH0 1330 aa18.48■□□□□ 0.55
IFT43-202ENST00000314067 CEP170BQ9Y4F5 1589 aaPredicted RBP18.47■□□□□ 0.55
IFT43-202ENST00000314067 MBD5Q9P267 1494 aa18.47■□□□□ 0.55
IFT43-202ENST00000314067 RTEL1-TNFRSF6BF6WH68 1400 aa18.43■□□□□ 0.54
IFT43-202ENST00000314067 POLR1AO95602 1720 aaPredicted RBP18.43■□□□□ 0.54
IFT43-202ENST00000314067 CAMSAP2Q08AD1 1489 aa18.41■□□□□ 0.54
IFT43-202ENST00000314067 NCOA2Q15596 1464 aa18.41■□□□□ 0.54
IFT43-202ENST00000314067 A2ML1A8K2U0 1454 aa18.4■□□□□ 0.54
IFT43-202ENST00000314067 DNMT1P26358 1616 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms