RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 RUSC2Q8N2Y8 1516 aa15.75■□□□□ 0.11
EBF1-201ENST00000313708 PDCL3Q9H2J4 239 aa15.73■□□□□ 0.11
EBF1-201ENST00000313708 WDR97A6NE52 1622 aa15.73■□□□□ 0.11
EBF1-201ENST00000313708 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.73■□□□□ 0.11
EBF1-201ENST00000313708 MAP7D2Q96T17 732 aa15.73■□□□□ 0.11
EBF1-201ENST00000313708 R3HCC1Q9Y3T6 440 aaKnown RBP15.73■□□□□ 0.11
EBF1-201ENST00000313708 MRE11P49959 708 aa15.73■□□□□ 0.11
EBF1-201ENST00000313708 KIAA1211Q6ZU35 1233 aa15.72■□□□□ 0.11
EBF1-201ENST00000313708 GBP4Q96PP9 640 aa15.72■□□□□ 0.11
EBF1-201ENST00000313708 CENPQQ7L2Z9 268 aaPredicted RBP15.71■□□□□ 0.1
EBF1-201ENST00000313708 RRAGDQ9NQL2 400 aaPredicted RBP15.7■□□□□ 0.1
EBF1-201ENST00000313708 ESPNB1AK53 854 aa15.7■□□□□ 0.1
EBF1-201ENST00000313708 PRDM10Q9NQV6 1147 aa15.69■□□□□ 0.1
EBF1-201ENST00000313708 DDX11L8A8MPP1 907 aa15.69■□□□□ 0.1
EBF1-201ENST00000313708 ZHX1Q9UKY1 873 aaPredicted RBP15.68■□□□□ 0.1
EBF1-201ENST00000313708 KDM2AQ9Y2K7 1162 aa15.67■□□□□ 0.1
EBF1-201ENST00000313708 CECR2Q9BXF3 1484 aa15.67■□□□□ 0.1
EBF1-201ENST00000313708 SKAP1Q86WV1 359 aa15.66■□□□□ 0.1
EBF1-201ENST00000313708 SMG6Q86US8 1419 aaKnown RBP15.65■□□□□ 0.1
EBF1-201ENST00000313708 BBXQ8WY36 941 aaPredicted RBP15.65■□□□□ 0.1
EBF1-201ENST00000313708 CHAF1AQ13111 956 aaPredicted RBP15.65■□□□□ 0.1
EBF1-201ENST00000313708 KTN1Q86UP2 1357 aaKnown RBP15.65■□□□□ 0.1
EBF1-201ENST00000313708 PLCB2Q00722 1185 aa15.65■□□□□ 0.1
EBF1-201ENST00000313708 ZNF771Q7L3S4 317 aaPredicted RBP15.65■□□□□ 0.1
EBF1-201ENST00000313708 CNTLNQ9NXG0 1405 aa15.64■□□□□ 0.09
EBF1-201ENST00000313708 CLCN1P35523 988 aa15.64■□□□□ 0.09
EBF1-201ENST00000313708 DCAF11Q8TEB1 546 aa15.64■□□□□ 0.09
EBF1-201ENST00000313708 TPRNQ4KMQ1 711 aa15.64■□□□□ 0.09
EBF1-201ENST00000313708 TRAK2O60296 914 aa15.63■□□□□ 0.09
EBF1-201ENST00000313708 ARID3CA6NKF2 412 aa15.62■□□□□ 0.09
EBF1-201ENST00000313708 MTERF4Q7Z6M4 381 aaKnown RBP15.62■□□□□ 0.09
EBF1-201ENST00000313708 CC2D1BQ5T0F9 858 aaKnown RBP15.62■□□□□ 0.09
EBF1-201ENST00000313708 MFAP1P55081 439 aaKnown RBP15.62■□□□□ 0.09
EBF1-201ENST00000313708 PTMSP20962 102 aa15.62■□□□□ 0.09
EBF1-201ENST00000313708 MTUS2Q5JR59 1369 aa15.62■□□□□ 0.09
EBF1-201ENST00000313708 TNNT3P45378 269 aaPredicted RBP15.61■□□□□ 0.09
EBF1-201ENST00000313708 PDE3BQ13370 1112 aa15.61■□□□□ 0.09
EBF1-201ENST00000313708 GRPEL1Q9HAV7 217 aa15.61■□□□□ 0.09
EBF1-201ENST00000313708 FOXD4L1Q9NU39 408 aa15.6■□□□□ 0.09
EBF1-201ENST00000313708 KIAA2012Q0VF49 1180 aa15.59■□□□□ 0.09
EBF1-201ENST00000313708 CARD11Q9BXL7 1154 aa15.59■□□□□ 0.09
EBF1-201ENST00000313708 MROH2BQ7Z745 1585 aa15.58■□□□□ 0.08
EBF1-201ENST00000313708 FOXD1Q16676 465 aa15.58■□□□□ 0.08
EBF1-201ENST00000313708 CHMP5Q9NZZ3 219 aa15.58■□□□□ 0.08
EBF1-201ENST00000313708 RAPGEF2Q9Y4G8 1499 aa15.57■□□□□ 0.08
EBF1-201ENST00000313708 MAPK8IP2Q13387 824 aaPredicted RBP15.57■□□□□ 0.08
EBF1-201ENST00000313708 UQCRHLA0A096LP55 91 aa15.57■□□□□ 0.08
EBF1-201ENST00000313708 UQCRHP07919 91 aa15.57■□□□□ 0.08
EBF1-201ENST00000313708 CALD1Q05682 793 aaKnown RBP15.56■□□□□ 0.08
EBF1-201ENST00000313708 L3MBTL2Q969R5 705 aa15.56■□□□□ 0.08
EBF1-201ENST00000313708 PDIA4P13667 645 aaKnown RBP15.55■□□□□ 0.08
EBF1-201ENST00000313708 CSPP1Q1MSJ5 1256 aa15.55■□□□□ 0.08
EBF1-201ENST00000313708 PANK2Q9BZ23 570 aa15.55■□□□□ 0.08
EBF1-201ENST00000313708 CCDC7Q96M83 1385 aa15.55■□□□□ 0.08
EBF1-201ENST00000313708 NASPP49321 788 aaPredicted RBP15.55■□□□□ 0.08
EBF1-201ENST00000313708 DDX49Q9Y6V7 483 aaKnown RBP15.54■□□□□ 0.08
EBF1-201ENST00000313708 SKOR2Q2VWA4 1001 aaPredicted RBP15.54■□□□□ 0.08
EBF1-201ENST00000313708 XRCC6P12956 609 aaKnown RBP eCLIP15.54■□□□□ 0.08
EBF1-201ENST00000313708 RALBP1Q15311 655 aa15.53■□□□□ 0.08
EBF1-201ENST00000313708 FGD1P98174 961 aa15.52■□□□□ 0.07
EBF1-201ENST00000313708 BCL11BQ9C0K0 894 aaPredicted RBP15.51■□□□□ 0.07
EBF1-201ENST00000313708 CCDC173Q0VFZ6 552 aa15.51■□□□□ 0.07
EBF1-201ENST00000313708 WIZO95785 1651 aa15.5■□□□□ 0.07
EBF1-201ENST00000313708 FTSJ3Q8IY81 847 aaKnown RBP15.5■□□□□ 0.07
EBF1-201ENST00000313708 MCM4P33991 863 aa15.5■□□□□ 0.07
EBF1-201ENST00000313708 RRBP1Q9P2E9 1410 aaKnown RBP15.5■□□□□ 0.07
EBF1-201ENST00000313708 KIF21BO75037 1637 aa15.5■□□□□ 0.07
EBF1-201ENST00000313708 BAZ1AQ9NRL2 1556 aaPredicted RBP15.49■□□□□ 0.07
EBF1-201ENST00000313708 FHAD1B1AJZ9 1412 aa15.49■□□□□ 0.07
EBF1-201ENST00000313708 MAPK8IP3Q9UPT6 1336 aa15.49■□□□□ 0.07
EBF1-201ENST00000313708 AAMPQ13685 434 aa15.49■□□□□ 0.07
EBF1-201ENST00000313708 KIF7Q2M1P5 1343 aa15.48■□□□□ 0.07
EBF1-201ENST00000313708 NEUROD2Q15784 382 aa15.48■□□□□ 0.07
EBF1-201ENST00000313708 MYBBP1AQ9BQG0 1328 aaKnown RBP15.48■□□□□ 0.07
EBF1-201ENST00000313708 CDCA7LQ96GN5 454 aa15.48■□□□□ 0.07
EBF1-201ENST00000313708 ARHGAP35Q9NRY4 1499 aa15.47■□□□□ 0.07
EBF1-201ENST00000313708 ZSCAN30Q86W11 494 aa15.46■□□□□ 0.07
EBF1-201ENST00000313708 ZNF777Q9ULD5 760 aaPredicted RBP15.46■□□□□ 0.06
EBF1-201ENST00000313708 NLRP13Q86W25 1043 aa15.45■□□□□ 0.06
EBF1-201ENST00000313708 CBX1P83916 185 aa15.45■□□□□ 0.06
EBF1-201ENST00000313708 PABPN1Q86U42 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
EBF1-201ENST00000313708 PMFBP1Q8TBY8 1022 aa15.43■□□□□ 0.06
EBF1-201ENST00000313708 ISY1Q9ULR0 285 aaKnown RBP15.43■□□□□ 0.06
EBF1-201ENST00000313708 NAP1L2Q9ULW6 460 aaPredicted RBP15.43■□□□□ 0.06
EBF1-201ENST00000313708 KIF15Q9NS87 1388 aa15.43■□□□□ 0.06
EBF1-201ENST00000313708 GOLGA2Q08379 1002 aa15.43■□□□□ 0.06
EBF1-201ENST00000313708 RWDD1Q9H446 243 aaPredicted RBP15.42■□□□□ 0.06
EBF1-201ENST00000313708 MPHOSPH9Q99550 1183 aa15.42■□□□□ 0.06
EBF1-201ENST00000313708 CHMP4BQ9H444 224 aaKnown RBP15.42■□□□□ 0.06
EBF1-201ENST00000313708 KNSTRNQ9Y448 316 aa15.42■□□□□ 0.06
EBF1-201ENST00000313708 PLCD3Q8N3E9 789 aa15.41■□□□□ 0.06
EBF1-201ENST00000313708 FMN1Q68DA7 1419 aa15.4■□□□□ 0.06
EBF1-201ENST00000313708 CGNQ9P2M7 1197 aaKnown RBP15.4■□□□□ 0.06
EBF1-201ENST00000313708 CCDC18Q5T9S5 1454 aa15.4■□□□□ 0.06
EBF1-201ENST00000313708 XPCQ01831 940 aaPredicted RBP15.39■□□□□ 0.05
EBF1-201ENST00000313708 SMAP1Q8IYB5 467 aaPredicted RBP15.38■□□□□ 0.05
EBF1-201ENST00000313708 PNISRQ8TF01 805 aaKnown RBP15.38■□□□□ 0.05
EBF1-201ENST00000313708 C22orf23Q9BZE7 217 aa15.37■□□□□ 0.05
EBF1-201ENST00000313708 CCDC39Q9UFE4 941 aa15.37■□□□□ 0.05
EBF1-201ENST00000313708 DRC7Q8IY82 874 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms