RNA–Protein interactions for RNA: ENST00000313654.13

LAMA3-202, Transcript of laminin subunit alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA3, Length 10,661 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-202ENST00000313654 CCDC191Q8NCU4 936 aa16.08■□□□□ 0.16
LAMA3-202ENST00000313654 CCDC34Q96HJ3 373 aa16.08■□□□□ 0.16
LAMA3-202ENST00000313654 RASSF8Q8NHQ8 419 aa16.07■□□□□ 0.16
LAMA3-202ENST00000313654 PLCD4Q9BRC7 762 aa16.07■□□□□ 0.16
LAMA3-202ENST00000313654 HMMRO75330 724 aa16.06■□□□□ 0.16
LAMA3-202ENST00000313654 RDXP35241 583 aaKnown RBP16.06■□□□□ 0.16
LAMA3-202ENST00000313654 FAM13BQ9NYF5 915 aa16.06■□□□□ 0.16
LAMA3-202ENST00000313654 PES1O00541 588 aaKnown RBP16.05■□□□□ 0.16
LAMA3-202ENST00000313654 CCDC180Q9P1Z9 1646 aa16.05■□□□□ 0.16
LAMA3-202ENST00000313654 ZNF592Q92610 1267 aa16.05■□□□□ 0.16
LAMA3-202ENST00000313654 MS4A1P11836 297 aa16.05■□□□□ 0.16
LAMA3-202ENST00000313654 KNSTRNQ9Y448 316 aa16.04■□□□□ 0.16
LAMA3-202ENST00000313654 CSPP1Q1MSJ5 1256 aa16.04■□□□□ 0.16
LAMA3-202ENST00000313654 HAP1P54257 671 aaPredicted RBP16.03■□□□□ 0.16
LAMA3-202ENST00000313654 TSR1Q2NL82 804 aaKnown RBP16.02■□□□□ 0.16
LAMA3-202ENST00000313654 HSP90AB3PQ58FF7 597 aa16.02■□□□□ 0.16
LAMA3-202ENST00000313654 AK7Q96M32 723 aa16.02■□□□□ 0.15
LAMA3-202ENST00000313654 EIF4G2P78344 907 aaKnown RBP eCLIP16.01■□□□□ 0.15
LAMA3-202ENST00000313654 CFAP44Q96MT7 982 aa16.01■□□□□ 0.15
LAMA3-202ENST00000313654 CWC15Q9P013 229 aaKnown RBP16.01■□□□□ 0.15
LAMA3-202ENST00000313654 H0YHG0 523 aa16■□□□□ 0.15
LAMA3-202ENST00000313654 RUFY1Q96T51 708 aa15.99■□□□□ 0.15
LAMA3-202ENST00000313654 DCAF1Q9Y4B6 1507 aa15.98■□□□□ 0.15
LAMA3-202ENST00000313654 APBB1O00213 710 aa15.98■□□□□ 0.15
LAMA3-202ENST00000313654 TPD52L1Q16890 204 aaPredicted RBP15.97■□□□□ 0.15
LAMA3-202ENST00000313654 CHIC2Q9UKJ5 165 aa15.97■□□□□ 0.15
LAMA3-202ENST00000313654 TPM1P09493 284 aa15.96■□□□□ 0.15
LAMA3-202ENST00000313654 KRI1Q8N9T8 703 aaKnown RBP15.95■□□□□ 0.14
LAMA3-202ENST00000313654 PPP1R15AO75807 674 aaPredicted RBP15.95■□□□□ 0.14
LAMA3-202ENST00000313654 DDX11L8A8MPP1 907 aa15.94■□□□□ 0.14
LAMA3-202ENST00000313654 WWC1Q8IX03 1113 aa15.94■□□□□ 0.14
LAMA3-202ENST00000313654 FOXD4L1Q9NU39 408 aa15.94■□□□□ 0.14
LAMA3-202ENST00000313654 DCTN1Q14203 1278 aa15.94■□□□□ 0.14
LAMA3-202ENST00000313654 VPS53Q5VIR6 699 aa15.93■□□□□ 0.14
LAMA3-202ENST00000313654 NEFHP12036 1026 aa15.93■□□□□ 0.14
LAMA3-202ENST00000313654 FOXD4L5Q5VV16 416 aaPredicted RBP15.93■□□□□ 0.14
LAMA3-202ENST00000313654 FOXD4L4Q8WXT5 416 aaPredicted RBP15.93■□□□□ 0.14
LAMA3-202ENST00000313654 KIF16BQ96L93 1317 aa15.92■□□□□ 0.14
LAMA3-202ENST00000313654 NOL8Q76FK4 1167 aaKnown RBP15.92■□□□□ 0.14
LAMA3-202ENST00000313654 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.92■□□□□ 0.14
LAMA3-202ENST00000313654 KAT6BQ8WYB5 2073 aa15.91■□□□□ 0.14
LAMA3-202ENST00000313654 GOLGA6L19H0YKK7 550 aa15.91■□□□□ 0.14
LAMA3-202ENST00000313654 TPM2P07951 284 aa15.9■□□□□ 0.14
LAMA3-202ENST00000313654 DYDC1Q8WWB3 177 aa15.9■□□□□ 0.14
LAMA3-202ENST00000313654 CDR1P51861 262 aa15.9■□□□□ 0.14
LAMA3-202ENST00000313654 MAPK8IP2Q13387 824 aaPredicted RBP15.9■□□□□ 0.14
LAMA3-202ENST00000313654 MFAP1P55081 439 aaKnown RBP15.9■□□□□ 0.14
LAMA3-202ENST00000313654 CCDC66A2RUB6 948 aa15.89■□□□□ 0.13
LAMA3-202ENST00000313654 ACBD3Q9H3P7 528 aa15.89■□□□□ 0.13
LAMA3-202ENST00000313654 HSP90B2PQ58FF3 399 aa15.89■□□□□ 0.13
LAMA3-202ENST00000313654 IPO9Q96P70 1041 aaKnown RBP15.88■□□□□ 0.13
LAMA3-202ENST00000313654 GPATCH3Q96I76 525 aa15.87■□□□□ 0.13
LAMA3-202ENST00000313654 HOMER1Q86YM7 354 aa15.87■□□□□ 0.13
LAMA3-202ENST00000313654 ARGLU1Q9NWB6 273 aaPredicted RBP15.87■□□□□ 0.13
LAMA3-202ENST00000313654 NUDCQ9Y266 331 aa15.86■□□□□ 0.13
LAMA3-202ENST00000313654 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.86■□□□□ 0.13
LAMA3-202ENST00000313654 IPO7O95373 1038 aaKnown RBP15.85■□□□□ 0.13
LAMA3-202ENST00000313654 CDCA8Q53HL2 280 aa15.84■□□□□ 0.13
LAMA3-202ENST00000313654 BCL11BQ9C0K0 894 aaPredicted RBP15.84■□□□□ 0.13
LAMA3-202ENST00000313654 CC2D1BQ5T0F9 858 aaKnown RBP15.84■□□□□ 0.13
LAMA3-202ENST00000313654 U2SURPO15042 1029 aaKnown RBP15.83■□□□□ 0.13
LAMA3-202ENST00000313654 TSPYL1Q9H0U9 437 aa15.83■□□□□ 0.13
LAMA3-202ENST00000313654 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.83■□□□□ 0.13
LAMA3-202ENST00000313654 BECN2A8MW95 431 aa15.83■□□□□ 0.12
LAMA3-202ENST00000313654 SF3A1Q15459 793 aaKnown RBP15.83■□□□□ 0.12
LAMA3-202ENST00000313654 PCMTD1Q96MG8 357 aaPredicted RBP15.82■□□□□ 0.12
LAMA3-202ENST00000313654 TRIM6-TRIM34B2RNG4 842 aa15.82■□□□□ 0.12
LAMA3-202ENST00000313654 KIF3AQ9Y496 699 aa15.82■□□□□ 0.12
LAMA3-202ENST00000313654 INCENPQ9NQS7 918 aa15.81■□□□□ 0.12
LAMA3-202ENST00000313654 TCERG1O14776 1098 aaKnown RBP15.81■□□□□ 0.12
LAMA3-202ENST00000313654 ITPRIPQ8IWB1 547 aa15.81■□□□□ 0.12
LAMA3-202ENST00000313654 H3BQV1 296 aa15.8■□□□□ 0.12
LAMA3-202ENST00000313654 IFFO2Q5TF58 517 aa15.8■□□□□ 0.12
LAMA3-202ENST00000313654 MARCH6O60337 910 aa15.8■□□□□ 0.12
LAMA3-202ENST00000313654 GSE1Q14687 1217 aa15.79■□□□□ 0.12
LAMA3-202ENST00000313654 NAP1L1P55209 391 aaKnown RBP15.79■□□□□ 0.12
LAMA3-202ENST00000313654 ST18O60284 1047 aa15.79■□□□□ 0.12
LAMA3-202ENST00000313654 CNKSR2Q8WXI2 1034 aa15.79■□□□□ 0.12
LAMA3-202ENST00000313654 ZRSR2Q15696 482 aaKnown RBP15.79■□□□□ 0.12
LAMA3-202ENST00000313654 MNS1Q8NEH6 495 aa15.78■□□□□ 0.12
LAMA3-202ENST00000313654 LMOD2Q6P5Q4 547 aa15.78■□□□□ 0.12
LAMA3-202ENST00000313654 LEKR1Q6ZMV7 388 aa15.78■□□□□ 0.12
LAMA3-202ENST00000313654 NEXNQ0ZGT2 675 aa15.78■□□□□ 0.12
LAMA3-202ENST00000313654 DHX37Q8IY37 1157 aaKnown RBP15.78■□□□□ 0.12
LAMA3-202ENST00000313654 MTERF4Q7Z6M4 381 aaKnown RBP15.77■□□□□ 0.12
LAMA3-202ENST00000313654 FAM43AQ8N2R8 423 aa15.77■□□□□ 0.12
LAMA3-202ENST00000313654 CAGE1Q8TC20 777 aa15.76■□□□□ 0.11
LAMA3-202ENST00000313654 TAF3Q5VWG9 929 aa15.76■□□□□ 0.11
LAMA3-202ENST00000313654 IFT57Q9NWB7 429 aa15.76■□□□□ 0.11
LAMA3-202ENST00000313654 FOXD4L6Q3SYB3 417 aaPredicted RBP15.76■□□□□ 0.11
LAMA3-202ENST00000313654 FOXD4L3Q6VB84 417 aaPredicted RBP15.76■□□□□ 0.11
LAMA3-202ENST00000313654 TCEAL9Q9UHQ7 104 aa15.75■□□□□ 0.11
LAMA3-202ENST00000313654 ANKRD20A12PQ8NF67 263 aa15.74■□□□□ 0.11
LAMA3-202ENST00000313654 KIAA0754O94854 1291 aa15.74■□□□□ 0.11
LAMA3-202ENST00000313654 RWDD1Q9H446 243 aaPredicted RBP15.74■□□□□ 0.11
LAMA3-202ENST00000313654 SKOR2Q2VWA4 1001 aaPredicted RBP15.74■□□□□ 0.11
LAMA3-202ENST00000313654 BCCIPQ9P287 314 aaKnown RBP eCLIP15.73■□□□□ 0.11
LAMA3-202ENST00000313654 DDX49Q9Y6V7 483 aaKnown RBP15.73■□□□□ 0.11
LAMA3-202ENST00000313654 GORABQ5T7V8 394 aa15.73■□□□□ 0.11
LAMA3-202ENST00000313654 CT47A1Q5JQC4 288 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms