RNA–Protein interactions for RNA: ENST00000312756.4

GFM1-202, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-202ENST00000312756 TRIM26Q12899 539 aaPredicted RBP11.5□□□□□ -0.57
GFM1-202ENST00000312756 ABCC2Q92887 1545 aa11.5□□□□□ -0.57
GFM1-202ENST00000312756 UBE2Q2Q8WVN8 375 aa11.48□□□□□ -0.57
GFM1-202ENST00000312756 PHLDB1Q86UU1 1377 aa11.48□□□□□ -0.57
GFM1-202ENST00000312756 ZCCHC11Q5TAX3 1644 aaKnown RBP11.47□□□□□ -0.57
GFM1-202ENST00000312756 EHBP1L1Q8N3D4 1523 aa11.47□□□□□ -0.57
GFM1-202ENST00000312756 KIF14Q15058 1648 aa11.46□□□□□ -0.57
GFM1-202ENST00000312756 NCOA2Q15596 1464 aa11.45□□□□□ -0.58
GFM1-202ENST00000312756 SUPT6HQ7KZ85 1726 aaKnown RBP11.45□□□□□ -0.58
GFM1-202ENST00000312756 HOMEZQ8IX15 550 aa11.45□□□□□ -0.58
GFM1-202ENST00000312756 UHRF1BP1LA0JNW5 1464 aa11.45□□□□□ -0.58
GFM1-202ENST00000312756 KDM5BQ9UGL1 1544 aa11.43□□□□□ -0.58
GFM1-202ENST00000312756 TROQ12816 1431 aaPredicted RBP11.42□□□□□ -0.58
GFM1-202ENST00000312756 PLEKHD1A6NEE1 506 aa11.42□□□□□ -0.58
GFM1-202ENST00000312756 GTF3C3Q9Y5Q9 886 aa11.42□□□□□ -0.58
GFM1-202ENST00000312756 CNKSR2Q8WXI2 1034 aa11.42□□□□□ -0.58
GFM1-202ENST00000312756 KCNH8Q96L42 1107 aa11.41□□□□□ -0.58
GFM1-202ENST00000312756 CDK11AQ9UQ88 783 aaPredicted RBP11.41□□□□□ -0.58
GFM1-202ENST00000312756 PLEKHG5O94827 1062 aa11.39□□□□□ -0.59
GFM1-202ENST00000312756 NPM1P06748 294 aaKnown RBP eCLIP11.39□□□□□ -0.59
GFM1-202ENST00000312756 ITGAEP38570 1179 aa11.39□□□□□ -0.59
GFM1-202ENST00000312756 RRBP1Q9P2E9 1410 aaKnown RBP11.39□□□□□ -0.59
GFM1-202ENST00000312756 FAM50AQ14320 339 aaKnown RBP11.38□□□□□ -0.59
GFM1-202ENST00000312756 CCNB3Q8WWL7 1395 aa11.37□□□□□ -0.59
GFM1-202ENST00000312756 MYOM3Q5VTT5 1437 aa11.37□□□□□ -0.59
GFM1-202ENST00000312756 FGD6Q6ZV73 1430 aa11.37□□□□□ -0.59
GFM1-202ENST00000312756 TTC37Q6PGP7 1564 aa11.37□□□□□ -0.59
GFM1-202ENST00000312756 ANP32EQ9BTT0 268 aa11.36□□□□□ -0.59
GFM1-202ENST00000312756 ZNF644Q9H582 1327 aaPredicted RBP11.36□□□□□ -0.59
GFM1-202ENST00000312756 ABCC10Q5T3U5 1492 aa11.36□□□□□ -0.59
GFM1-202ENST00000312756 ASXL2Q76L83 1435 aa11.36□□□□□ -0.59
GFM1-202ENST00000312756 CDC42BPAQ5VT25 1732 aa11.36□□□□□ -0.59
GFM1-202ENST00000312756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.35□□□□□ -0.59
GFM1-202ENST00000312756 GPATCH8Q9UKJ3 1502 aaKnown RBP11.34□□□□□ -0.59
GFM1-202ENST00000312756 PTPN23Q9H3S7 1636 aa11.34□□□□□ -0.59
GFM1-202ENST00000312756 KDM2AQ9Y2K7 1162 aa11.34□□□□□ -0.59
GFM1-202ENST00000312756 MAPKBP1O60336 1514 aa11.34□□□□□ -0.59
GFM1-202ENST00000312756 WDR7Q9Y4E6 1490 aa11.34□□□□□ -0.59
GFM1-202ENST00000312756 ZNF777Q9ULD5 760 aaPredicted RBP11.33□□□□□ -0.6
GFM1-202ENST00000312756 CDC42BPBQ9Y5S2 1711 aa11.32□□□□□ -0.6
GFM1-202ENST00000312756 ITSN2Q9NZM3 1697 aa11.31□□□□□ -0.6
GFM1-202ENST00000312756 PODXL2Q9NZ53 605 aa11.3□□□□□ -0.6
GFM1-202ENST00000312756 CFDP1Q9UEE9 299 aaPredicted RBP11.3□□□□□ -0.6
GFM1-202ENST00000312756 TRHP20396 242 aaPredicted RBP11.3□□□□□ -0.6
GFM1-202ENST00000312756 PTPRKQ15262 1439 aa11.3□□□□□ -0.6
GFM1-202ENST00000312756 MYO5CQ9NQX4 1742 aa11.29□□□□□ -0.6
GFM1-202ENST00000312756 PREX2Q70Z35 1606 aa11.29□□□□□ -0.6
GFM1-202ENST00000312756 MIA2Q96PC5 1412 aa11.28□□□□□ -0.6
GFM1-202ENST00000312756 CAMSAP2Q08AD1 1489 aa11.28□□□□□ -0.6
GFM1-202ENST00000312756 TCOF1Q13428 1488 aaKnown RBP11.28□□□□□ -0.6
GFM1-202ENST00000312756 DIP2BQ9P265 1576 aa11.27□□□□□ -0.61
GFM1-202ENST00000312756 ARHGAP5Q13017 1502 aa11.27□□□□□ -0.61
GFM1-202ENST00000312756 SAMD9LQ8IVG5 1584 aa11.26□□□□□ -0.61
GFM1-202ENST00000312756 FAM69CQ0P6D2 419 aa11.26□□□□□ -0.61
GFM1-202ENST00000312756 CHIC2Q9UKJ5 165 aa11.26□□□□□ -0.61
GFM1-202ENST00000312756 KIF13AQ9H1H9 1805 aa11.26□□□□□ -0.61
GFM1-202ENST00000312756 ABCA9Q8IUA7 1624 aa11.26□□□□□ -0.61
GFM1-202ENST00000312756 HNRNPMP52272 730 aaKnown RBP eCLIP11.25□□□□□ -0.61
GFM1-202ENST00000312756 ACIN1Q9UKV3 1341 aaKnown RBP11.25□□□□□ -0.61
GFM1-202ENST00000312756 PLCH2O75038 1416 aa11.24□□□□□ -0.61
GFM1-202ENST00000312756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.23□□□□□ -0.61
GFM1-202ENST00000312756 ABCC5O15440 1437 aa11.23□□□□□ -0.61
GFM1-202ENST00000312756 DAPK1P53355 1430 aa11.22□□□□□ -0.61
GFM1-202ENST00000312756 DNMT1P26358 1616 aaKnown RBP11.22□□□□□ -0.61
GFM1-202ENST00000312756 SYCP2Q9BX26 1530 aa11.22□□□□□ -0.61
GFM1-202ENST00000312756 ARHGEF12Q9NZN5 1544 aa11.22□□□□□ -0.61
GFM1-202ENST00000312756 ATXN8OSP0DMR3 200 aa11.21□□□□□ -0.61
GFM1-202ENST00000312756 TSPOAP1O95153 1857 aa11.21□□□□□ -0.62
GFM1-202ENST00000312756 GLI2P10070 1586 aa11.21□□□□□ -0.62
GFM1-202ENST00000312756 RRP7BPQ9NSQ0 103 aa11.21□□□□□ -0.62
GFM1-202ENST00000312756 CD109Q6YHK3 1445 aa11.21□□□□□ -0.62
GFM1-202ENST00000312756 FANCAO15360 1455 aa11.2□□□□□ -0.62
GFM1-202ENST00000312756 MBD5Q9P267 1494 aa11.2□□□□□ -0.62
GFM1-202ENST00000312756 PIAS4Q8N2W9 510 aaPredicted RBP11.19□□□□□ -0.62
GFM1-202ENST00000312756 MAP3K4Q9Y6R4 1608 aa11.19□□□□□ -0.62
GFM1-202ENST00000312756 EFCAB2Q5VUJ9 269 aa11.19□□□□□ -0.62
GFM1-202ENST00000312756 CROCC2H7BZ55 1655 aa11.19□□□□□ -0.62
GFM1-202ENST00000312756 TMEM132AQ24JP5 1023 aa11.18□□□□□ -0.62
GFM1-202ENST00000312756 ABCC1P33527 1531 aa11.18□□□□□ -0.62
GFM1-202ENST00000312756 KDM6BO15054 1643 aa11.17□□□□□ -0.62
GFM1-202ENST00000312756 TRAPPC8Q9Y2L5 1435 aa11.17□□□□□ -0.62
GFM1-202ENST00000312756 RAB3GAP2Q9H2M9 1393 aa11.17□□□□□ -0.62
GFM1-202ENST00000312756 PPRC1Q5VV67 1664 aaKnown RBP11.16□□□□□ -0.62
GFM1-202ENST00000312756 AFAP1Q8N556 730 aa11.16□□□□□ -0.62
GFM1-202ENST00000312756 ARAP3Q8WWN8 1544 aa11.15□□□□□ -0.62
GFM1-202ENST00000312756 NAIPQ13075 1403 aa11.15□□□□□ -0.62
GFM1-202ENST00000312756 AKNAQ7Z591 1439 aa11.15□□□□□ -0.62
GFM1-202ENST00000312756 SETD5Q9C0A6 1442 aa11.15□□□□□ -0.62
GFM1-202ENST00000312756 ARHGEF5Q12774 1597 aa11.15□□□□□ -0.62
GFM1-202ENST00000312756 ADGRL1O94910 1474 aa11.15□□□□□ -0.63
GFM1-202ENST00000312756 KLHL34Q8N239 644 aa11.14□□□□□ -0.63
GFM1-202ENST00000312756 CCDC141Q6ZP82 1450 aa11.14□□□□□ -0.63
GFM1-202ENST00000312756 C9orf84Q5VXU9 1444 aa11.14□□□□□ -0.63
GFM1-202ENST00000312756 SCAPERQ9BY12 1400 aa11.14□□□□□ -0.63
GFM1-202ENST00000312756 ADGBQ8N7X0 1667 aa11.13□□□□□ -0.63
GFM1-202ENST00000312756 HFM1A2PYH4 1435 aa11.13□□□□□ -0.63
GFM1-202ENST00000312756 PKNOX2Q96KN3 472 aa11.13□□□□□ -0.63
GFM1-202ENST00000312756 KIAA1107Q9UPP5 1409 aa11.13□□□□□ -0.63
GFM1-202ENST00000312756 GCC2Q8IWJ2 1684 aa11.12□□□□□ -0.63
GFM1-202ENST00000312756 NCOA1Q15788 1441 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms