RNA–Protein interactions for RNA: ENST00000311659.4

UBQLN3-201, Transcript of ubiquilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN3, Length 2,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3-201ENST00000311659 MYOM3Q5VTT5 1437 aa11.82□□□□□ -0.52
UBQLN3-201ENST00000311659 PRG4Q92954 1404 aaPredicted RBP11.82□□□□□ -0.52
UBQLN3-201ENST00000311659 DENND4BO75064 1496 aaPredicted RBP11.82□□□□□ -0.52
UBQLN3-201ENST00000311659 ARHGEF11O15085 1522 aa11.81□□□□□ -0.52
UBQLN3-201ENST00000311659 EHBP1L1Q8N3D4 1523 aa11.8□□□□□ -0.52
UBQLN3-201ENST00000311659 HNRNPUQ00839 825 aaKnown RBP eCLIP11.8□□□□□ -0.52
UBQLN3-201ENST00000311659 MTUS2Q5JR59 1369 aa11.79□□□□□ -0.52
UBQLN3-201ENST00000311659 WASHC2AQ641Q2 1341 aa11.79□□□□□ -0.52
UBQLN3-201ENST00000311659 ERICH6BQ5W0A0 696 aa11.79□□□□□ -0.52
UBQLN3-201ENST00000311659 POLR1AO95602 1720 aaPredicted RBP11.79□□□□□ -0.52
UBQLN3-201ENST00000311659 CNTLNQ9NXG0 1405 aa11.77□□□□□ -0.52
UBQLN3-201ENST00000311659 OSCARQ8IYS5 282 aa11.77□□□□□ -0.52
UBQLN3-201ENST00000311659 TCOF1Q13428 1488 aaKnown RBP11.77□□□□□ -0.53
UBQLN3-201ENST00000311659 CDK11AQ9UQ88 783 aaPredicted RBP11.76□□□□□ -0.53
UBQLN3-201ENST00000311659 RAPGEF6Q8TEU7 1601 aa11.76□□□□□ -0.53
UBQLN3-201ENST00000311659 AKNAQ7Z591 1439 aa11.76□□□□□ -0.53
UBQLN3-201ENST00000311659 ERCC6L2Q5T890 1561 aa11.76□□□□□ -0.53
UBQLN3-201ENST00000311659 MAGI3Q5TCQ9 1506 aa11.76□□□□□ -0.53
UBQLN3-201ENST00000311659 KDM6BO15054 1643 aa11.76□□□□□ -0.53
UBQLN3-201ENST00000311659 PLB1Q6P1J6 1458 aa11.75□□□□□ -0.53
UBQLN3-201ENST00000311659 HSPA5P11021 654 aaKnown RBP11.75□□□□□ -0.53
UBQLN3-201ENST00000311659 IRX6P78412 446 aaPredicted RBP11.75□□□□□ -0.53
UBQLN3-201ENST00000311659 PTPRGP23470 1445 aa11.73□□□□□ -0.53
UBQLN3-201ENST00000311659 NCOA1Q15788 1441 aa11.73□□□□□ -0.53
UBQLN3-201ENST00000311659 EPRSP07814 1512 aaKnown RBP11.73□□□□□ -0.53
UBQLN3-201ENST00000311659 NUP153P49790 1475 aaKnown RBP11.73□□□□□ -0.53
UBQLN3-201ENST00000311659 PPP4R2Q9NY27 417 aa11.72□□□□□ -0.53
UBQLN3-201ENST00000311659 CCDC184Q52MB2 194 aa11.72□□□□□ -0.53
UBQLN3-201ENST00000311659 ARID3CA6NKF2 412 aa11.71□□□□□ -0.53
UBQLN3-201ENST00000311659 ABCA8O94911 1581 aa11.71□□□□□ -0.53
UBQLN3-201ENST00000311659 CDK13Q14004 1512 aaKnown RBP11.71□□□□□ -0.53
UBQLN3-201ENST00000311659 EIF4G2P78344 907 aaKnown RBP eCLIP11.69□□□□□ -0.54
UBQLN3-201ENST00000311659 CCDC7Q96M83 1385 aa11.69□□□□□ -0.54
UBQLN3-201ENST00000311659 ZBED9Q6R2W3 1325 aa11.69□□□□□ -0.54
UBQLN3-201ENST00000311659 PRKRIP1Q9H875 184 aaPredicted RBP11.68□□□□□ -0.54
UBQLN3-201ENST00000311659 TEX14Q8IWB6 1497 aa11.68□□□□□ -0.54
UBQLN3-201ENST00000311659 C11orf95C9JLR9 678 aaPredicted RBP11.67□□□□□ -0.54
UBQLN3-201ENST00000311659 ERICH6Q7L0X2 663 aa11.66□□□□□ -0.54
UBQLN3-201ENST00000311659 RPRD2Q5VT52 1461 aaKnown RBP11.66□□□□□ -0.54
UBQLN3-201ENST00000311659 SPATA31E1Q6ZUB1 1445 aa11.66□□□□□ -0.54
UBQLN3-201ENST00000311659 RRP7BPQ9NSQ0 103 aa11.66□□□□□ -0.54
UBQLN3-201ENST00000311659 MIA2Q96PC5 1412 aa11.65□□□□□ -0.54
UBQLN3-201ENST00000311659 L3MBTL2Q969R5 705 aa11.64□□□□□ -0.55
UBQLN3-201ENST00000311659 ABCC2Q92887 1545 aa11.64□□□□□ -0.55
UBQLN3-201ENST00000311659 MYT1LQ9UL68 1186 aa11.64□□□□□ -0.55
UBQLN3-201ENST00000311659 ATP10BO94823 1461 aa11.63□□□□□ -0.55
UBQLN3-201ENST00000311659 MPHOSPH9Q99550 1183 aa11.63□□□□□ -0.55
UBQLN3-201ENST00000311659 B4GALNT3Q6L9W6 998 aa11.62□□□□□ -0.55
UBQLN3-201ENST00000311659 ANKRD30BQ9BXX2 1392 aa11.62□□□□□ -0.55
UBQLN3-201ENST00000311659 MRS2Q9HD23 443 aa11.62□□□□□ -0.55
UBQLN3-201ENST00000311659 DNMT1P26358 1616 aaKnown RBP11.61□□□□□ -0.55
UBQLN3-201ENST00000311659 FAM9BQ8IZU0 186 aa11.61□□□□□ -0.55
UBQLN3-201ENST00000311659 CHIC2Q9UKJ5 165 aa11.61□□□□□ -0.55
UBQLN3-201ENST00000311659 SMG6Q86US8 1419 aaKnown RBP11.61□□□□□ -0.55
UBQLN3-201ENST00000311659 NBPF8Q3BBV2 869 aa11.6□□□□□ -0.55
UBQLN3-201ENST00000311659 UHRF1BP1LA0JNW5 1464 aa11.6□□□□□ -0.55
UBQLN3-201ENST00000311659 KIF7Q2M1P5 1343 aa11.6□□□□□ -0.55
UBQLN3-201ENST00000311659 TROQ12816 1431 aaPredicted RBP11.6□□□□□ -0.55
UBQLN3-201ENST00000311659 ROCK1Q13464 1354 aa11.59□□□□□ -0.55
UBQLN3-201ENST00000311659 BCORL1Q5H9F3 1711 aa11.59□□□□□ -0.55
UBQLN3-201ENST00000311659 RNF123Q5XPI4 1314 aa11.59□□□□□ -0.55
UBQLN3-201ENST00000311659 ADCY10Q96PN6 1610 aa11.58□□□□□ -0.56
UBQLN3-201ENST00000311659 MBD5Q9P267 1494 aa11.58□□□□□ -0.56
UBQLN3-201ENST00000311659 PLEKHD1A6NEE1 506 aa11.58□□□□□ -0.56
UBQLN3-201ENST00000311659 DAPK1P53355 1430 aa11.58□□□□□ -0.56
UBQLN3-201ENST00000311659 DHX29Q7Z478 1369 aaKnown RBP11.57□□□□□ -0.56
UBQLN3-201ENST00000311659 ZCCHC11Q5TAX3 1644 aaKnown RBP11.57□□□□□ -0.56
UBQLN3-201ENST00000311659 FOXD1Q16676 465 aa11.57□□□□□ -0.56
UBQLN3-201ENST00000311659 KIF14Q15058 1648 aa11.56□□□□□ -0.56
UBQLN3-201ENST00000311659 DEKP35659 375 aaKnown RBP11.55□□□□□ -0.56
UBQLN3-201ENST00000311659 NOP58Q9Y2X3 529 aaKnown RBP11.55□□□□□ -0.56
UBQLN3-201ENST00000311659 ABCC5O15440 1437 aa11.54□□□□□ -0.56
UBQLN3-201ENST00000311659 KDM5CP41229 1560 aa11.54□□□□□ -0.56
UBQLN3-201ENST00000311659 RIMBP3CA6NJZ7 1639 aa11.54□□□□□ -0.56
UBQLN3-201ENST00000311659 RIMBP3BA6NNM3 1639 aa11.54□□□□□ -0.56
UBQLN3-201ENST00000311659 RIMBP3Q9UFD9 1639 aa11.54□□□□□ -0.56
UBQLN3-201ENST00000311659 PZPP20742 1482 aa11.53□□□□□ -0.56
UBQLN3-201ENST00000311659 ADGBQ8N7X0 1667 aa11.53□□□□□ -0.56
UBQLN3-201ENST00000311659 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.56
UBQLN3-201ENST00000311659 ILDR1Q86SU0 546 aaPredicted RBP11.52□□□□□ -0.56
UBQLN3-201ENST00000311659 NUDCQ9Y266 331 aa11.52□□□□□ -0.56
UBQLN3-201ENST00000311659 ITSN2Q9NZM3 1697 aa11.51□□□□□ -0.57
UBQLN3-201ENST00000311659 CROCC2H7BZ55 1655 aa11.51□□□□□ -0.57
UBQLN3-201ENST00000311659 ABCC10Q5T3U5 1492 aa11.5□□□□□ -0.57
UBQLN3-201ENST00000311659 CDC42BPAQ5VT25 1732 aa11.49□□□□□ -0.57
UBQLN3-201ENST00000311659 GPATCH8Q9UKJ3 1502 aaKnown RBP11.49□□□□□ -0.57
UBQLN3-201ENST00000311659 E9PCH4 1651 aa11.49□□□□□ -0.57
UBQLN3-201ENST00000311659 CYB5RLQ6IPT4 315 aa11.48□□□□□ -0.57
UBQLN3-201ENST00000311659 USP47Q96K76 1375 aa11.48□□□□□ -0.57
UBQLN3-201ENST00000311659 ARID4BQ4LE39 1312 aaPredicted RBP11.47□□□□□ -0.57
UBQLN3-201ENST00000311659 NPM1P06748 294 aaKnown RBP eCLIP11.47□□□□□ -0.57
UBQLN3-201ENST00000311659 SLC4A1APQ9BWU0 796 aaKnown RBP11.47□□□□□ -0.57
UBQLN3-201ENST00000311659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.47□□□□□ -0.57
UBQLN3-201ENST00000311659 IPO9Q96P70 1041 aaKnown RBP11.47□□□□□ -0.57
UBQLN3-201ENST00000311659 WDR7Q9Y4E6 1490 aa11.47□□□□□ -0.57
UBQLN3-201ENST00000311659 TTC37Q6PGP7 1564 aa11.47□□□□□ -0.57
UBQLN3-201ENST00000311659 CCDC136Q96JN2 1154 aa11.46□□□□□ -0.57
UBQLN3-201ENST00000311659 CFDP1Q9UEE9 299 aaPredicted RBP11.46□□□□□ -0.57
UBQLN3-201ENST00000311659 LRPPRCP42704 1394 aaKnown RBP11.46□□□□□ -0.58
UBQLN3-201ENST00000311659 PNISRQ8TF01 805 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms