RNA–Protein interactions for RNA: ENST00000311637.9

ATP9A-201, Transcript of ATPase phospholipid transporting 9A (putative), humanhuman

TSL 1 (best) BASIC

Gene ATP9A, Length 7,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9A-201ENST00000311637 GTF3C3Q9Y5Q9 886 aa12.64□□□□□ -0.39
ATP9A-201ENST00000311637 TRIM34Q9BYJ4 488 aa12.63□□□□□ -0.39
ATP9A-201ENST00000311637 PTMAP06454 111 aaKnown RBP12.63□□□□□ -0.39
ATP9A-201ENST00000311637 IRX6P78412 446 aaPredicted RBP12.62□□□□□ -0.39
ATP9A-201ENST00000311637 ZCCHC6Q5VYS8 1495 aaKnown RBP12.61□□□□□ -0.39
ATP9A-201ENST00000311637 APBB1O00213 710 aa12.6□□□□□ -0.39
ATP9A-201ENST00000311637 WWC1Q8IX03 1113 aa12.6□□□□□ -0.39
ATP9A-201ENST00000311637 MORC1Q86VD1 984 aa12.59□□□□□ -0.39
ATP9A-201ENST00000311637 CCNB3Q8WWL7 1395 aa12.59□□□□□ -0.39
ATP9A-201ENST00000311637 BECN1Q14457 450 aa12.59□□□□□ -0.39
ATP9A-201ENST00000311637 ANP32EQ9BTT0 268 aa12.58□□□□□ -0.4
ATP9A-201ENST00000311637 AMPHP49418 695 aa12.58□□□□□ -0.4
ATP9A-201ENST00000311637 BAZ1BQ9UIG0 1483 aaKnown RBP12.58□□□□□ -0.4
ATP9A-201ENST00000311637 MARCH6O60337 910 aa12.58□□□□□ -0.4
ATP9A-201ENST00000311637 GOLGA6L4A6NEF3 574 aa12.57□□□□□ -0.4
ATP9A-201ENST00000311637 TCEAL9Q9UHQ7 104 aa12.57□□□□□ -0.4
ATP9A-201ENST00000311637 DCAF11Q8TEB1 546 aa12.57□□□□□ -0.4
ATP9A-201ENST00000311637 CHMP4BQ9H444 224 aaKnown RBP12.57□□□□□ -0.4
ATP9A-201ENST00000311637 CLIP1P30622 1438 aa12.57□□□□□ -0.4
ATP9A-201ENST00000311637 GOLGA6L6A8MZA4 724 aa12.56□□□□□ -0.4
ATP9A-201ENST00000311637 TOMM22Q9NS69 142 aa12.56□□□□□ -0.4
ATP9A-201ENST00000311637 SAMD1Q6SPF0 538 aaPredicted RBP12.56□□□□□ -0.4
ATP9A-201ENST00000311637 PIP4K2BP78356 416 aa12.55□□□□□ -0.4
ATP9A-201ENST00000311637 KIAA2012Q0VF49 1180 aa12.55□□□□□ -0.4
ATP9A-201ENST00000311637 DNTTIP2Q5QJE6 756 aaKnown RBP12.54□□□□□ -0.4
ATP9A-201ENST00000311637 WASHC2CQ9Y4E1 1318 aa12.54□□□□□ -0.4
ATP9A-201ENST00000311637 TMF1P82094 1093 aa12.53□□□□□ -0.4
ATP9A-201ENST00000311637 RASSF8Q8NHQ8 419 aa12.53□□□□□ -0.4
ATP9A-201ENST00000311637 KIF3BO15066 747 aa12.52□□□□□ -0.4
ATP9A-201ENST00000311637 FBXO3Q9UK99 471 aa12.52□□□□□ -0.4
ATP9A-201ENST00000311637 SPAG9O60271 1321 aaKnown RBP12.52□□□□□ -0.41
ATP9A-201ENST00000311637 NUTM2BA6NNL0 878 aaPredicted RBP12.51□□□□□ -0.41
ATP9A-201ENST00000311637 NUTM2EB1AL46 878 aaPredicted RBP12.51□□□□□ -0.41
ATP9A-201ENST00000311637 NUTM2AQ8IVF1 878 aaPredicted RBP12.51□□□□□ -0.41
ATP9A-201ENST00000311637 CCAR1Q8IX12 1150 aaKnown RBP12.51□□□□□ -0.41
ATP9A-201ENST00000311637 ATF3P18847 181 aa12.51□□□□□ -0.41
ATP9A-201ENST00000311637 NOL10Q9BSC4 688 aaKnown RBP12.51□□□□□ -0.41
ATP9A-201ENST00000311637 OSCARQ8IYS5 282 aa12.51□□□□□ -0.41
ATP9A-201ENST00000311637 EFCAB2Q5VUJ9 269 aa12.5□□□□□ -0.41
ATP9A-201ENST00000311637 KIAA1211Q6ZU35 1233 aa12.5□□□□□ -0.41
ATP9A-201ENST00000311637 NGEFQ8N5V2 710 aa12.5□□□□□ -0.41
ATP9A-201ENST00000311637 CHAF1AQ13111 956 aaPredicted RBP12.5□□□□□ -0.41
ATP9A-201ENST00000311637 CARMIL2Q6F5E8 1435 aa12.5□□□□□ -0.41
ATP9A-201ENST00000311637 GLIPR1L2Q4G1C9 344 aa12.49□□□□□ -0.41
ATP9A-201ENST00000311637 MCCP23508 829 aa12.49□□□□□ -0.41
ATP9A-201ENST00000311637 NOC3LQ8WTT2 800 aaKnown RBP12.49□□□□□ -0.41
ATP9A-201ENST00000311637 HSP90AB1P08238 724 aaKnown RBP12.48□□□□□ -0.41
ATP9A-201ENST00000311637 MS4A1P11836 297 aa12.48□□□□□ -0.41
ATP9A-201ENST00000311637 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.48□□□□□ -0.41
ATP9A-201ENST00000311637 STK31Q9BXU1 1019 aa12.48□□□□□ -0.41
ATP9A-201ENST00000311637 NRDCO43847 1150 aa12.48□□□□□ -0.41
ATP9A-201ENST00000311637 C1orf141Q5JVX7 400 aa12.47□□□□□ -0.41
ATP9A-201ENST00000311637 FAM69CQ0P6D2 419 aa12.47□□□□□ -0.41
ATP9A-201ENST00000311637 PSME1Q06323 249 aa12.46□□□□□ -0.41
ATP9A-201ENST00000311637 ACIN1Q9UKV3 1341 aaKnown RBP12.46□□□□□ -0.41
ATP9A-201ENST00000311637 ERICH6BQ5W0A0 696 aa12.46□□□□□ -0.41
ATP9A-201ENST00000311637 RGS3P49796 1198 aa12.46□□□□□ -0.41
ATP9A-201ENST00000311637 CREBRFQ8IUR6 639 aa12.46□□□□□ -0.42
ATP9A-201ENST00000311637 DDRGK1Q96HY6 314 aa12.45□□□□□ -0.42
ATP9A-201ENST00000311637 VPS37DQ86XT2 251 aa12.45□□□□□ -0.42
ATP9A-201ENST00000311637 KIF27Q86VH2 1401 aa12.45□□□□□ -0.42
ATP9A-201ENST00000311637 PAXIP1Q6ZW49 1069 aaPredicted RBP12.44□□□□□ -0.42
ATP9A-201ENST00000311637 AMOTL1Q8IY63 956 aa12.44□□□□□ -0.42
ATP9A-201ENST00000311637 HSP90B1P14625 803 aaKnown RBP12.44□□□□□ -0.42
ATP9A-201ENST00000311637 RBM33Q96EV2 1170 aaKnown RBP12.44□□□□□ -0.42
ATP9A-201ENST00000311637 SLC4A10Q6U841 1118 aa12.43□□□□□ -0.42
ATP9A-201ENST00000311637 CFAP44Q96MT7 982 aa12.43□□□□□ -0.42
ATP9A-201ENST00000311637 CEP89Q96ST8 783 aa12.43□□□□□ -0.42
ATP9A-201ENST00000311637 U2AF1L5P0DN76 240 aaPredicted RBP12.43□□□□□ -0.42
ATP9A-201ENST00000311637 U2AF1Q01081 240 aaKnown RBP eCLIP12.43□□□□□ -0.42
ATP9A-201ENST00000311637 TTC5Q8N0Z6 440 aa12.43□□□□□ -0.42
ATP9A-201ENST00000311637 GPATCH3Q96I76 525 aa12.43□□□□□ -0.42
ATP9A-201ENST00000311637 USP35Q9P2H5 1018 aa12.43□□□□□ -0.42
ATP9A-201ENST00000311637 CHMP4AQ9BY43 222 aa12.43□□□□□ -0.42
ATP9A-201ENST00000311637 L1TD1Q5T7N2 865 aaKnown RBP12.41□□□□□ -0.42
ATP9A-201ENST00000311637 DRC7Q8IY82 874 aa12.41□□□□□ -0.42
ATP9A-201ENST00000311637 DHX16O60231 1041 aaKnown RBP12.4□□□□□ -0.42
ATP9A-201ENST00000311637 CALD1Q05682 793 aaKnown RBP12.4□□□□□ -0.42
ATP9A-201ENST00000311637 CECR2Q9BXF3 1484 aa12.39□□□□□ -0.43
ATP9A-201ENST00000311637 TERF2IPQ9NYB0 399 aa12.39□□□□□ -0.43
ATP9A-201ENST00000311637 PDS5BQ9NTI5 1447 aa12.38□□□□□ -0.43
ATP9A-201ENST00000311637 WASHC2AQ641Q2 1341 aa12.37□□□□□ -0.43
ATP9A-201ENST00000311637 TRIM6-TRIM34B2RNG4 842 aa12.36□□□□□ -0.43
ATP9A-201ENST00000311637 HDAC5Q9UQL6 1122 aa12.36□□□□□ -0.43
ATP9A-201ENST00000311637 CCDC43Q96MW1 224 aaKnown RBP12.36□□□□□ -0.43
ATP9A-201ENST00000311637 SLC4A3P48751 1232 aa12.35□□□□□ -0.43
ATP9A-201ENST00000311637 HNRNPMP52272 730 aaKnown RBP eCLIP12.35□□□□□ -0.43
ATP9A-201ENST00000311637 A0A0U1RQG5 324 aaPredicted RBP12.34□□□□□ -0.43
ATP9A-201ENST00000311637 TEFQ10587 303 aa12.34□□□□□ -0.43
ATP9A-201ENST00000311637 IPO8O15397 1037 aaKnown RBP12.33□□□□□ -0.43
ATP9A-201ENST00000311637 STRN4Q9NRL3 753 aa12.33□□□□□ -0.44
ATP9A-201ENST00000311637 WRNQ14191 1432 aaPredicted RBP eCLIP12.33□□□□□ -0.44
ATP9A-201ENST00000311637 PKD2Q13563 968 aa12.33□□□□□ -0.44
ATP9A-201ENST00000311637 ITPRIPQ8IWB1 547 aa12.32□□□□□ -0.44
ATP9A-201ENST00000311637 AKAP17AQ02040 695 aaKnown RBP12.32□□□□□ -0.44
ATP9A-201ENST00000311637 PAF1Q8N7H5 531 aa12.32□□□□□ -0.44
ATP9A-201ENST00000311637 FAM177BA6PVY3 158 aa12.32□□□□□ -0.44
ATP9A-201ENST00000311637 CCDC34Q96HJ3 373 aa12.32□□□□□ -0.44
ATP9A-201ENST00000311637 TRAK1Q9UPV9 953 aa12.32□□□□□ -0.44
ATP9A-201ENST00000311637 SPRYD3Q8NCJ5 442 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms