RNA–Protein interactions for RNA: ENST00000311191.10

LRCH1-201, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 4,710 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-201ENST00000311191 HECW1Q76N89 1606 aa24.27■■□□□ 1.48
LRCH1-201ENST00000311191 TROQ12816 1431 aaPredicted RBP24.26■■□□□ 1.47
LRCH1-201ENST00000311191 BIVM-ERCC5R4GMW8 1640 aa24.26■■□□□ 1.47
LRCH1-201ENST00000311191 PHLDB1Q86UU1 1377 aa24.24■■□□□ 1.47
LRCH1-201ENST00000311191 SETD5Q9C0A6 1442 aa24.24■■□□□ 1.47
LRCH1-201ENST00000311191 A0A0G2JS52 829 aa24.22■■□□□ 1.47
LRCH1-201ENST00000311191 CARD11Q9BXL7 1154 aa24.22■■□□□ 1.47
LRCH1-201ENST00000311191 ZBTB47Q9UFB7 747 aaPredicted RBP24.2■■□□□ 1.47
LRCH1-201ENST00000311191 VGFO15240 615 aaPredicted RBP24.19■■□□□ 1.46
LRCH1-201ENST00000311191 DNAJC5Q9H3Z4 198 aa24.18■■□□□ 1.46
LRCH1-201ENST00000311191 CLSPNQ9HAW4 1339 aa24.17■■□□□ 1.46
LRCH1-201ENST00000311191 TIMELESSQ9UNS1 1208 aa24.17■■□□□ 1.46
LRCH1-201ENST00000311191 MYT1Q01538 1121 aa24.16■■□□□ 1.46
LRCH1-201ENST00000311191 DCAF11Q8TEB1 546 aa24.16■■□□□ 1.46
LRCH1-201ENST00000311191 CFAP53Q96M91 514 aa24.15■■□□□ 1.46
LRCH1-201ENST00000311191 THEMISQ8N1K5 641 aaPredicted RBP24.13■■□□□ 1.45
LRCH1-201ENST00000311191 SCAPERQ9BY12 1400 aa24.13■■□□□ 1.45
LRCH1-201ENST00000311191 EIF4G3O43432 1585 aaKnown RBP24.12■■□□□ 1.45
LRCH1-201ENST00000311191 PLEKHG5O94827 1062 aa24.12■■□□□ 1.45
LRCH1-201ENST00000311191 EIF3AQ14152 1382 aaKnown RBP24.1■■□□□ 1.45
LRCH1-201ENST00000311191 SRPK2P78362 688 aaKnown RBP24.1■■□□□ 1.45
LRCH1-201ENST00000311191 STAC3Q96MF2 364 aa24.09■■□□□ 1.45
LRCH1-201ENST00000311191 YTHDC1Q96MU7 727 aaKnown RBP24.09■■□□□ 1.45
LRCH1-201ENST00000311191 DMRT2Q9Y5R5 561 aa24.09■■□□□ 1.45
LRCH1-201ENST00000311191 AKNAQ7Z591 1439 aa24.09■■□□□ 1.45
LRCH1-201ENST00000311191 KIF15Q9NS87 1388 aa24.08■■□□□ 1.45
LRCH1-201ENST00000311191 EHBP1L1Q8N3D4 1523 aa24.08■■□□□ 1.45
LRCH1-201ENST00000311191 MPHOSPH9Q99550 1183 aa24.08■■□□□ 1.45
LRCH1-201ENST00000311191 AFAP1Q8N556 730 aa24.08■■□□□ 1.45
LRCH1-201ENST00000311191 ZNF316A6NFI3 1004 aaPredicted RBP24.06■■□□□ 1.44
LRCH1-201ENST00000311191 TMF1P82094 1093 aa24.06■■□□□ 1.44
LRCH1-201ENST00000311191 HDGFL2Q7Z4V5 671 aaPredicted RBP24.06■■□□□ 1.44
LRCH1-201ENST00000311191 PPP6R1Q9UPN7 881 aa24.06■■□□□ 1.44
LRCH1-201ENST00000311191 KNSTRNQ9Y448 316 aa24.06■■□□□ 1.44
LRCH1-201ENST00000311191 WDR43Q15061 677 aaKnown RBP eCLIP24.04■■□□□ 1.44
LRCH1-201ENST00000311191 STK26Q9P289 416 aa24.04■■□□□ 1.44
LRCH1-201ENST00000311191 ADAMTS12P58397 1594 aa24.03■■□□□ 1.44
LRCH1-201ENST00000311191 DENND4BO75064 1496 aaPredicted RBP24.03■■□□□ 1.44
LRCH1-201ENST00000311191 CANXP27824 592 aaKnown RBP24.02■■□□□ 1.44
LRCH1-201ENST00000311191 CCDC144AA2RUR9 1427 aa24.01■■□□□ 1.43
LRCH1-201ENST00000311191 MIA2Q96PC5 1412 aa24.01■■□□□ 1.43
LRCH1-201ENST00000311191 RAPGEF3O95398 923 aa24.01■■□□□ 1.43
LRCH1-201ENST00000311191 NCOA2Q15596 1464 aa24■■□□□ 1.43
LRCH1-201ENST00000311191 FGD6Q6ZV73 1430 aa23.98■■□□□ 1.43
LRCH1-201ENST00000311191 NUDCQ9Y266 331 aa23.98■■□□□ 1.43
LRCH1-201ENST00000311191 NUP160Q12769 1436 aa23.97■■□□□ 1.43
LRCH1-201ENST00000311191 DIEXFQ68CQ4 756 aaKnown RBP23.97■■□□□ 1.43
LRCH1-201ENST00000311191 LRRC9Q6ZRR7 1453 aa23.97■■□□□ 1.43
LRCH1-201ENST00000311191 ANKLE2Q86XL3 938 aa23.96■■□□□ 1.43
LRCH1-201ENST00000311191 EPRSP07814 1512 aaKnown RBP23.95■■□□□ 1.43
LRCH1-201ENST00000311191 ASXL2Q76L83 1435 aa23.95■■□□□ 1.42
LRCH1-201ENST00000311191 ADGRL1O94910 1474 aa23.95■■□□□ 1.42
LRCH1-201ENST00000311191 ATF3P18847 181 aa23.95■■□□□ 1.42
LRCH1-201ENST00000311191 SLC52A1Q9NWF4 448 aa23.93■■□□□ 1.42
LRCH1-201ENST00000311191 PNNQ9H307 717 aaKnown RBP23.93■■□□□ 1.42
LRCH1-201ENST00000311191 KIF14Q15058 1648 aa23.92■■□□□ 1.42
LRCH1-201ENST00000311191 NGDNQ8NEJ9 315 aaKnown RBP23.91■■□□□ 1.42
LRCH1-201ENST00000311191 PAK3O75914 559 aaPredicted RBP23.9■■□□□ 1.42
LRCH1-201ENST00000311191 ANKRD50Q9ULJ7 1429 aa23.9■■□□□ 1.42
LRCH1-201ENST00000311191 TERF2IPQ9NYB0 399 aa23.88■■□□□ 1.41
LRCH1-201ENST00000311191 WDR7Q9Y4E6 1490 aa23.87■■□□□ 1.41
LRCH1-201ENST00000311191 SAFB2Q14151 953 aaKnown RBP eCLIP23.87■■□□□ 1.41
LRCH1-201ENST00000311191 CCDC9Q9Y3X0 531 aaKnown RBP23.87■■□□□ 1.41
LRCH1-201ENST00000311191 MEX3CQ5U5Q3 659 aaKnown RBP23.86■■□□□ 1.41
LRCH1-201ENST00000311191 TXNDC2Q86VQ3 553 aa23.86■■□□□ 1.41
LRCH1-201ENST00000311191 ARAP1Q96P48 1450 aa23.84■■□□□ 1.41
LRCH1-201ENST00000311191 CSB-PGBD3P0DP91 1061 aa23.84■■□□□ 1.41
LRCH1-201ENST00000311191 FANCAO15360 1455 aa23.84■■□□□ 1.41
LRCH1-201ENST00000311191 C9orf84Q5VXU9 1444 aa23.83■■□□□ 1.41
LRCH1-201ENST00000311191 UGGT2Q9NYU1 1516 aa23.83■■□□□ 1.41
LRCH1-201ENST00000311191 RAB3GAP2Q9H2M9 1393 aa23.83■■□□□ 1.41
LRCH1-201ENST00000311191 PPM1GO15355 546 aaPredicted RBP23.83■■□□□ 1.4
LRCH1-201ENST00000311191 ZNF644Q9H582 1327 aaPredicted RBP23.82■■□□□ 1.4
LRCH1-201ENST00000311191 ABCC2Q92887 1545 aa23.82■■□□□ 1.4
LRCH1-201ENST00000311191 ROCK2O75116 1388 aaKnown RBP23.81■■□□□ 1.4
LRCH1-201ENST00000311191 PROSER2Q86WR7 435 aaPredicted RBP23.79■■□□□ 1.4
LRCH1-201ENST00000311191 CCDC141Q6ZP82 1450 aa23.78■■□□□ 1.4
LRCH1-201ENST00000311191 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
LRCH1-201ENST00000311191 SUPT6HQ7KZ85 1726 aaKnown RBP23.76■■□□□ 1.39
LRCH1-201ENST00000311191 FOXD1Q16676 465 aa23.76■■□□□ 1.39
LRCH1-201ENST00000311191 DHX57Q6P158 1386 aaKnown RBP23.75■■□□□ 1.39
LRCH1-201ENST00000311191 NUTM2DQ5VT03 806 aaPredicted RBP23.75■■□□□ 1.39
LRCH1-201ENST00000311191 MAPK8IP3Q9UPT6 1336 aa23.75■■□□□ 1.39
LRCH1-201ENST00000311191 ARHGEF11O15085 1522 aa23.74■■□□□ 1.39
LRCH1-201ENST00000311191 PBRM1Q86U86 1689 aa23.74■■□□□ 1.39
LRCH1-201ENST00000311191 CDK13Q14004 1512 aaKnown RBP23.73■■□□□ 1.39
LRCH1-201ENST00000311191 SIN3AQ96ST3 1273 aa23.72■■□□□ 1.39
LRCH1-201ENST00000311191 DDX10Q13206 875 aaKnown RBP23.7■■□□□ 1.38
LRCH1-201ENST00000311191 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
LRCH1-201ENST00000311191 RAPGEF6Q8TEU7 1601 aa23.69■■□□□ 1.38
LRCH1-201ENST00000311191 ABCA5Q8WWZ7 1642 aa23.69■■□□□ 1.38
LRCH1-201ENST00000311191 RRBP1Q9P2E9 1410 aaKnown RBP23.69■■□□□ 1.38
LRCH1-201ENST00000311191 PLCH2O75038 1416 aa23.68■■□□□ 1.38
LRCH1-201ENST00000311191 PHF23Q9BUL5 403 aaPredicted RBP23.68■■□□□ 1.38
LRCH1-201ENST00000311191 RPGRIP1LQ68CZ1 1315 aa23.68■■□□□ 1.38
LRCH1-201ENST00000311191 EVC2Q86UK5 1308 aa23.68■■□□□ 1.38
LRCH1-201ENST00000311191 KIAA0556O60303 1618 aa23.67■■□□□ 1.38
LRCH1-201ENST00000311191 HFM1A2PYH4 1435 aa23.67■■□□□ 1.38
LRCH1-201ENST00000311191 CHMP4AQ9BY43 222 aa23.66■■□□□ 1.38
LRCH1-201ENST00000311191 NPHP1O15259 732 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms