RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 SMARCA2P51531 1590 aa16.74■□□□□ 0.27
SNED1-201ENST00000310397 ROCK2O75116 1388 aaKnown RBP16.73■□□□□ 0.27
SNED1-201ENST00000310397 TOP2AP11388 1531 aaKnown RBP16.72■□□□□ 0.27
SNED1-201ENST00000310397 IPO8O15397 1037 aaKnown RBP16.72■□□□□ 0.27
SNED1-201ENST00000310397 PDE3BQ13370 1112 aa16.72■□□□□ 0.27
SNED1-201ENST00000310397 PHLDB1Q86UU1 1377 aa16.72■□□□□ 0.27
SNED1-201ENST00000310397 EIF4G1Q04637 1599 aaKnown RBP16.71■□□□□ 0.27
SNED1-201ENST00000310397 GOLGA6L4A6NEF3 574 aa16.71■□□□□ 0.27
SNED1-201ENST00000310397 KANK1Q14678 1352 aa16.7■□□□□ 0.26
SNED1-201ENST00000310397 U2SURPO15042 1029 aaKnown RBP16.69■□□□□ 0.26
SNED1-201ENST00000310397 KANK4Q5T7N3 995 aaPredicted RBP16.69■□□□□ 0.26
SNED1-201ENST00000310397 RWDD1Q9H446 243 aaPredicted RBP16.69■□□□□ 0.26
SNED1-201ENST00000310397 PMFBP1Q8TBY8 1022 aa16.68■□□□□ 0.26
SNED1-201ENST00000310397 KCNJ4P48050 445 aa16.68■□□□□ 0.26
SNED1-201ENST00000310397 FGD1P98174 961 aa16.67■□□□□ 0.26
SNED1-201ENST00000310397 POGKQ9P215 609 aa16.67■□□□□ 0.26
SNED1-201ENST00000310397 TPRNQ4KMQ1 711 aa16.66■□□□□ 0.26
SNED1-201ENST00000310397 KIAA2012Q0VF49 1180 aa16.66■□□□□ 0.26
SNED1-201ENST00000310397 SYAP1Q96A49 352 aaPredicted RBP16.66■□□□□ 0.26
SNED1-201ENST00000310397 FANCIQ9NVI1 1328 aa16.66■□□□□ 0.26
SNED1-201ENST00000310397 MPHOSPH9Q99550 1183 aa16.66■□□□□ 0.26
SNED1-201ENST00000310397 C14orf37Q86TY3 774 aa16.65■□□□□ 0.26
SNED1-201ENST00000310397 GOLGA6L3A6NEY3 463 aa16.65■□□□□ 0.26
SNED1-201ENST00000310397 MORC1Q86VD1 984 aa16.65■□□□□ 0.26
SNED1-201ENST00000310397 CALD1Q05682 793 aaKnown RBP16.64■□□□□ 0.25
SNED1-201ENST00000310397 OS9Q13438 667 aaPredicted RBP16.64■□□□□ 0.25
SNED1-201ENST00000310397 NLRP13Q86W25 1043 aa16.63■□□□□ 0.25
SNED1-201ENST00000310397 SPRYD3Q8NCJ5 442 aa16.63■□□□□ 0.25
SNED1-201ENST00000310397 SLKQ9H2G2 1235 aaPredicted RBP16.62■□□□□ 0.25
SNED1-201ENST00000310397 PKD2Q13563 968 aa16.61■□□□□ 0.25
SNED1-201ENST00000310397 PLPPR3Q6T4P5 718 aa16.61■□□□□ 0.25
SNED1-201ENST00000310397 ZBED9Q6R2W3 1325 aa16.61■□□□□ 0.25
SNED1-201ENST00000310397 DRC7Q8IY82 874 aa16.61■□□□□ 0.25
SNED1-201ENST00000310397 DHX57Q6P158 1386 aaKnown RBP16.6■□□□□ 0.25
SNED1-201ENST00000310397 RSPH6AQ9H0K4 717 aa16.6■□□□□ 0.25
SNED1-201ENST00000310397 GZF1Q9H116 711 aaPredicted RBP16.59■□□□□ 0.25
SNED1-201ENST00000310397 EIF3AQ14152 1382 aaKnown RBP16.59■□□□□ 0.25
SNED1-201ENST00000310397 KIF15Q9NS87 1388 aa16.59■□□□□ 0.25
SNED1-201ENST00000310397 GOLGA2Q08379 1002 aa16.58■□□□□ 0.25
SNED1-201ENST00000310397 ANKRD30AQ9BXX3 1397 aa16.57■□□□□ 0.24
SNED1-201ENST00000310397 KIAA1211Q6ZU35 1233 aa16.56■□□□□ 0.24
SNED1-201ENST00000310397 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.56■□□□□ 0.24
SNED1-201ENST00000310397 ZBTB7CA1YPR0 619 aa16.55■□□□□ 0.24
SNED1-201ENST00000310397 CENPQQ7L2Z9 268 aaPredicted RBP16.55■□□□□ 0.24
SNED1-201ENST00000310397 DDX11L8A8MPP1 907 aa16.54■□□□□ 0.24
SNED1-201ENST00000310397 CCDC18Q5T9S5 1454 aa16.54■□□□□ 0.24
SNED1-201ENST00000310397 FOXD1Q16676 465 aa16.54■□□□□ 0.24
SNED1-201ENST00000310397 RAPGEF2Q9Y4G8 1499 aa16.54■□□□□ 0.24
SNED1-201ENST00000310397 NUP155O75694 1391 aa16.54■□□□□ 0.24
SNED1-201ENST00000310397 PHF14O94880 888 aa16.54■□□□□ 0.24
SNED1-201ENST00000310397 GSE1Q14687 1217 aa16.53■□□□□ 0.24
SNED1-201ENST00000310397 HTATSF1O43719 755 aaKnown RBP16.53■□□□□ 0.24
SNED1-201ENST00000310397 L3MBTL2Q969R5 705 aa16.53■□□□□ 0.24
SNED1-201ENST00000310397 ITPRIPQ8IWB1 547 aa16.53■□□□□ 0.24
SNED1-201ENST00000310397 SENP3Q9H4L4 574 aaPredicted RBP16.53■□□□□ 0.24
SNED1-201ENST00000310397 SRPK2P78362 688 aaKnown RBP16.52■□□□□ 0.24
SNED1-201ENST00000310397 MYBBP1AQ9BQG0 1328 aaKnown RBP16.52■□□□□ 0.23
SNED1-201ENST00000310397 FAM161AQ3B820 660 aa16.51■□□□□ 0.23
SNED1-201ENST00000310397 CSPP1Q1MSJ5 1256 aa16.51■□□□□ 0.23
SNED1-201ENST00000310397 CARMIL2Q6F5E8 1435 aa16.5■□□□□ 0.23
SNED1-201ENST00000310397 HSP90AA2PQ14568 343 aaPredicted RBP16.5■□□□□ 0.23
SNED1-201ENST00000310397 NAP1L2Q9ULW6 460 aaPredicted RBP16.5■□□□□ 0.23
SNED1-201ENST00000310397 CENPJQ9HC77 1338 aaPredicted RBP16.5■□□□□ 0.23
SNED1-201ENST00000310397 SMARCA4P51532 1647 aa16.5■□□□□ 0.23
SNED1-201ENST00000310397 CHMP4AQ9BY43 222 aa16.49■□□□□ 0.23
SNED1-201ENST00000310397 PDE4AP27815 886 aa16.49■□□□□ 0.23
SNED1-201ENST00000310397 U2AF1L5P0DN76 240 aaPredicted RBP16.49■□□□□ 0.23
SNED1-201ENST00000310397 U2AF1Q01081 240 aaKnown RBP eCLIP16.49■□□□□ 0.23
SNED1-201ENST00000310397 RTF1Q92541 710 aaKnown RBP16.48■□□□□ 0.23
SNED1-201ENST00000310397 MFAP1P55081 439 aaKnown RBP16.48■□□□□ 0.23
SNED1-201ENST00000310397 PRKRIP1Q9H875 184 aaPredicted RBP16.47■□□□□ 0.23
SNED1-201ENST00000310397 HDGFL2Q7Z4V5 671 aaPredicted RBP16.47■□□□□ 0.23
SNED1-201ENST00000310397 ERCC6Q03468 1493 aa16.47■□□□□ 0.23
SNED1-201ENST00000310397 HDGFP51858 240 aaKnown RBP16.47■□□□□ 0.23
SNED1-201ENST00000310397 SKOR2Q2VWA4 1001 aaPredicted RBP16.46■□□□□ 0.23
SNED1-201ENST00000310397 SMC4Q9NTJ3 1288 aa16.46■□□□□ 0.23
SNED1-201ENST00000310397 RRP1P56182 461 aaKnown RBP16.45■□□□□ 0.22
SNED1-201ENST00000310397 ST18O60284 1047 aa16.45■□□□□ 0.22
SNED1-201ENST00000310397 A0A0G2JS52 829 aa16.44■□□□□ 0.22
SNED1-201ENST00000310397 HMMRO75330 724 aa16.44■□□□□ 0.22
SNED1-201ENST00000310397 RSPH4AQ5TD94 716 aa16.44■□□□□ 0.22
SNED1-201ENST00000310397 TPM4P67936 248 aa16.42■□□□□ 0.22
SNED1-201ENST00000310397 HDAC5Q9UQL6 1122 aa16.41■□□□□ 0.22
SNED1-201ENST00000310397 CGNL1Q0VF96 1302 aa16.41■□□□□ 0.22
SNED1-201ENST00000310397 NGEFQ8N5V2 710 aa16.41■□□□□ 0.22
SNED1-201ENST00000310397 GNL2Q13823 731 aaKnown RBP16.4■□□□□ 0.22
SNED1-201ENST00000310397 GPATCH3Q96I76 525 aa16.4■□□□□ 0.22
SNED1-201ENST00000310397 PLEKHG5O94827 1062 aa16.39■□□□□ 0.21
SNED1-201ENST00000310397 FHOD3Q2V2M9 1422 aa16.38■□□□□ 0.21
SNED1-201ENST00000310397 SPAG9O60271 1321 aaKnown RBP16.38■□□□□ 0.21
SNED1-201ENST00000310397 E9PSI1 815 aa16.38■□□□□ 0.21
SNED1-201ENST00000310397 CCDC34Q96HJ3 373 aa16.38■□□□□ 0.21
SNED1-201ENST00000310397 USP47Q96K76 1375 aa16.38■□□□□ 0.21
SNED1-201ENST00000310397 CUX1P39880 1505 aa16.37■□□□□ 0.21
SNED1-201ENST00000310397 APBB1O00213 710 aa16.37■□□□□ 0.21
SNED1-201ENST00000310397 LMOD3Q0VAK6 560 aa16.37■□□□□ 0.21
SNED1-201ENST00000310397 TERF2IPQ9NYB0 399 aa16.36■□□□□ 0.21
SNED1-201ENST00000310397 KIF21BO75037 1637 aa16.35■□□□□ 0.21
SNED1-201ENST00000310397 CCDC144AA2RUR9 1427 aa16.35■□□□□ 0.21
SNED1-201ENST00000310397 PDS5BQ9NTI5 1447 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms