RNA–Protein interactions for RNA: ENST00000310015.10

SP3-201, Transcript of Sp3 transcription factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SP3, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-201ENST00000310015 FOXD4L4Q8WXT5 416 aaPredicted RBP14.75□□□□□ -0.05
SP3-201ENST00000310015 MAPK8IP3Q9UPT6 1336 aa14.75□□□□□ -0.05
SP3-201ENST00000310015 NOL8Q76FK4 1167 aaKnown RBP14.74□□□□□ -0.05
SP3-201ENST00000310015 CFAP53Q96M91 514 aa14.74□□□□□ -0.05
SP3-201ENST00000310015 PPP1R15AO75807 674 aaPredicted RBP14.73□□□□□ -0.05
SP3-201ENST00000310015 GOLGA6L3A6NEY3 463 aa14.72□□□□□ -0.05
SP3-201ENST00000310015 ZNF771Q7L3S4 317 aaPredicted RBP14.72□□□□□ -0.05
SP3-201ENST00000310015 BCL11BQ9C0K0 894 aaPredicted RBP14.72□□□□□ -0.05
SP3-201ENST00000310015 KNSTRNQ9Y448 316 aa14.72□□□□□ -0.05
SP3-201ENST00000310015 LMOD2Q6P5Q4 547 aa14.72□□□□□ -0.05
SP3-201ENST00000310015 MCCP23508 829 aa14.71□□□□□ -0.05
SP3-201ENST00000310015 IPO9Q96P70 1041 aaKnown RBP14.71□□□□□ -0.05
SP3-201ENST00000310015 U2SURPO15042 1029 aaKnown RBP14.7□□□□□ -0.06
SP3-201ENST00000310015 CARD11Q9BXL7 1154 aa14.69□□□□□ -0.06
SP3-201ENST00000310015 SOX12O15370 315 aa14.67□□□□□ -0.06
SP3-201ENST00000310015 TCERG1O14776 1098 aaKnown RBP14.67□□□□□ -0.06
SP3-201ENST00000310015 CCAR2Q8N163 923 aaKnown RBP14.67□□□□□ -0.06
SP3-201ENST00000310015 RSF1Q96T23 1441 aaPredicted RBP14.66□□□□□ -0.06
SP3-201ENST00000310015 GBP4Q96PP9 640 aa14.66□□□□□ -0.06
SP3-201ENST00000310015 WWC1Q8IX03 1113 aa14.66□□□□□ -0.06
SP3-201ENST00000310015 MFAP1P55081 439 aaKnown RBP14.65□□□□□ -0.06
SP3-201ENST00000310015 NPM1P06748 294 aaKnown RBP eCLIP14.65□□□□□ -0.06
SP3-201ENST00000310015 PKNOX2Q96KN3 472 aa14.65□□□□□ -0.06
SP3-201ENST00000310015 CDCA8Q53HL2 280 aa14.64□□□□□ -0.07
SP3-201ENST00000310015 TPM4P67936 248 aa14.63□□□□□ -0.07
SP3-201ENST00000310015 CEP164Q9UPV0 1460 aa14.62□□□□□ -0.07
SP3-201ENST00000310015 KCNH8Q96L42 1107 aa14.62□□□□□ -0.07
SP3-201ENST00000310015 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.62□□□□□ -0.07
SP3-201ENST00000310015 RSPH6AQ9H0K4 717 aa14.61□□□□□ -0.07
SP3-201ENST00000310015 ZNF592Q92610 1267 aa14.61□□□□□ -0.07
SP3-201ENST00000310015 MS4A1P11836 297 aa14.61□□□□□ -0.07
SP3-201ENST00000310015 USP35Q9P2H5 1018 aa14.6□□□□□ -0.07
SP3-201ENST00000310015 FOXD4L6Q3SYB3 417 aaPredicted RBP14.59□□□□□ -0.07
SP3-201ENST00000310015 FOXD4L3Q6VB84 417 aaPredicted RBP14.59□□□□□ -0.07
SP3-201ENST00000310015 CCNB3Q8WWL7 1395 aa14.59□□□□□ -0.07
SP3-201ENST00000310015 PES1O00541 588 aaKnown RBP14.58□□□□□ -0.08
SP3-201ENST00000310015 CHMP4BQ9H444 224 aaKnown RBP14.58□□□□□ -0.08
SP3-201ENST00000310015 SLC4A3P48751 1232 aa14.57□□□□□ -0.08
SP3-201ENST00000310015 KIAA1211Q6ZU35 1233 aa14.56□□□□□ -0.08
SP3-201ENST00000310015 RASSF8Q8NHQ8 419 aa14.56□□□□□ -0.08
SP3-201ENST00000310015 SYAP1Q96A49 352 aaPredicted RBP14.55□□□□□ -0.08
SP3-201ENST00000310015 ITPRIPQ8IWB1 547 aa14.55□□□□□ -0.08
SP3-201ENST00000310015 FANCIQ9NVI1 1328 aa14.55□□□□□ -0.08
SP3-201ENST00000310015 RCAN3Q9UKA8 241 aa14.54□□□□□ -0.08
SP3-201ENST00000310015 NUDCQ9Y266 331 aa14.54□□□□□ -0.08
SP3-201ENST00000310015 HSPA5P11021 654 aaKnown RBP14.54□□□□□ -0.08
SP3-201ENST00000310015 ZNF330Q9Y3S2 320 aaPredicted RBP14.54□□□□□ -0.08
SP3-201ENST00000310015 FAM13BQ9NYF5 915 aa14.53□□□□□ -0.08
SP3-201ENST00000310015 TPM3P06753 285 aa14.53□□□□□ -0.08
SP3-201ENST00000310015 WRNQ14191 1432 aaPredicted RBP eCLIP14.52□□□□□ -0.08
SP3-201ENST00000310015 VPS53Q5VIR6 699 aa14.52□□□□□ -0.09
SP3-201ENST00000310015 APPP05067 770 aa14.52□□□□□ -0.09
SP3-201ENST00000310015 DHX37Q8IY37 1157 aaKnown RBP14.52□□□□□ -0.09
SP3-201ENST00000310015 CALD1Q05682 793 aaKnown RBP14.51□□□□□ -0.09
SP3-201ENST00000310015 TRIM6-TRIM34B2RNG4 842 aa14.51□□□□□ -0.09
SP3-201ENST00000310015 GSE1Q14687 1217 aa14.5□□□□□ -0.09
SP3-201ENST00000310015 SETD5Q9C0A6 1442 aa14.49□□□□□ -0.09
SP3-201ENST00000310015 POGKQ9P215 609 aa14.49□□□□□ -0.09
SP3-201ENST00000310015 CEP89Q96ST8 783 aa14.49□□□□□ -0.09
SP3-201ENST00000310015 CHMP7Q8WUX9 453 aaPredicted RBP14.48□□□□□ -0.09
SP3-201ENST00000310015 FBXW7Q969H0 707 aa14.48□□□□□ -0.09
SP3-201ENST00000310015 CCDC9Q9Y3X0 531 aaKnown RBP14.48□□□□□ -0.09
SP3-201ENST00000310015 CFAP44Q96MT7 982 aa14.48□□□□□ -0.09
SP3-201ENST00000310015 CHMP3Q9Y3E7 222 aa14.47□□□□□ -0.09
SP3-201ENST00000310015 SAFB2Q14151 953 aaKnown RBP eCLIP14.47□□□□□ -0.09
SP3-201ENST00000310015 PLCD4Q9BRC7 762 aa14.47□□□□□ -0.09
SP3-201ENST00000310015 HTATSF1O43719 755 aaKnown RBP14.46□□□□□ -0.09
SP3-201ENST00000310015 TPD52L1Q16890 204 aaPredicted RBP14.46□□□□□ -0.09
SP3-201ENST00000310015 RRP12Q5JTH9 1297 aaKnown RBP14.45□□□□□ -0.1
SP3-201ENST00000310015 CFDP1Q9UEE9 299 aaPredicted RBP14.45□□□□□ -0.1
SP3-201ENST00000310015 DCAF11Q8TEB1 546 aa14.44□□□□□ -0.1
SP3-201ENST00000310015 TMF1P82094 1093 aa14.43□□□□□ -0.1
SP3-201ENST00000310015 MAPK8IP2Q13387 824 aaPredicted RBP14.43□□□□□ -0.1
SP3-201ENST00000310015 SKIDA1Q1XH10 827 aa14.43□□□□□ -0.1
SP3-201ENST00000310015 KTN1Q86UP2 1357 aaKnown RBP14.42□□□□□ -0.1
SP3-201ENST00000310015 PLEKHD1A6NEE1 506 aa14.42□□□□□ -0.1
SP3-201ENST00000310015 RWDD1Q9H446 243 aaPredicted RBP14.42□□□□□ -0.1
SP3-201ENST00000310015 VPS8Q8N3P4 1428 aa14.42□□□□□ -0.1
SP3-201ENST00000310015 KIF27Q86VH2 1401 aa14.42□□□□□ -0.1
SP3-201ENST00000310015 TOMM22Q9NS69 142 aa14.41□□□□□ -0.1
SP3-201ENST00000310015 PCMTD1Q96MG8 357 aaPredicted RBP14.4□□□□□ -0.1
SP3-201ENST00000310015 RB1CC1Q8TDY2 1594 aa14.4□□□□□ -0.1
SP3-201ENST00000310015 RALBP1Q15311 655 aa14.4□□□□□ -0.1
SP3-201ENST00000310015 MAP7D2Q96T17 732 aa14.4□□□□□ -0.1
SP3-201ENST00000310015 PDE4AP27815 886 aa14.4□□□□□ -0.1
SP3-201ENST00000310015 RTF1Q92541 710 aaKnown RBP14.39□□□□□ -0.11
SP3-201ENST00000310015 MARCH6O60337 910 aa14.39□□□□□ -0.11
SP3-201ENST00000310015 FOXD1Q16676 465 aa14.39□□□□□ -0.11
SP3-201ENST00000310015 CSPP1Q1MSJ5 1256 aa14.39□□□□□ -0.11
SP3-201ENST00000310015 PHF14O94880 888 aa14.38□□□□□ -0.11
SP3-201ENST00000310015 GORABQ5T7V8 394 aa14.38□□□□□ -0.11
SP3-201ENST00000310015 RAB3GAP2Q9H2M9 1393 aa14.38□□□□□ -0.11
SP3-201ENST00000310015 SF3A1Q15459 793 aaKnown RBP14.38□□□□□ -0.11
SP3-201ENST00000310015 GPS2Q13227 327 aa14.38□□□□□ -0.11
SP3-201ENST00000310015 TEX35Q5T0J7 233 aa14.38□□□□□ -0.11
SP3-201ENST00000310015 MORC1Q86VD1 984 aa14.38□□□□□ -0.11
SP3-201ENST00000310015 PMFBP1Q8TBY8 1022 aa14.38□□□□□ -0.11
SP3-201ENST00000310015 H3BQV1 296 aa14.37□□□□□ -0.11
SP3-201ENST00000310015 IFFO2Q5TF58 517 aa14.37□□□□□ -0.11
SP3-201ENST00000310015 FOSBP53539 338 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms