RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 NACADO15069 1562 aa10.55□□□□□ -0.72
PPARGC1B-201ENST00000309241 GOLGA6L3A6NEY3 463 aa10.55□□□□□ -0.72
PPARGC1B-201ENST00000309241 RB1CC1Q8TDY2 1594 aa10.55□□□□□ -0.72
PPARGC1B-201ENST00000309241 CEP162Q5TB80 1403 aa10.54□□□□□ -0.72
PPARGC1B-201ENST00000309241 GNL2Q13823 731 aaKnown RBP10.54□□□□□ -0.72
PPARGC1B-201ENST00000309241 APPP05067 770 aa10.54□□□□□ -0.72
PPARGC1B-201ENST00000309241 GSE1Q14687 1217 aa10.54□□□□□ -0.72
PPARGC1B-201ENST00000309241 RGL3Q3MIN7 710 aa10.53□□□□□ -0.72
PPARGC1B-201ENST00000309241 KIAA2012Q0VF49 1180 aa10.53□□□□□ -0.72
PPARGC1B-201ENST00000309241 TNIKQ9UKE5 1360 aa10.52□□□□□ -0.72
PPARGC1B-201ENST00000309241 CHMP4CQ96CF2 233 aa10.52□□□□□ -0.73
PPARGC1B-201ENST00000309241 BRPF3Q9ULD4 1205 aa10.52□□□□□ -0.73
PPARGC1B-201ENST00000309241 GZF1Q9H116 711 aaPredicted RBP10.52□□□□□ -0.73
PPARGC1B-201ENST00000309241 CALRP27797 417 aaKnown RBP10.52□□□□□ -0.73
PPARGC1B-201ENST00000309241 NUDCQ9Y266 331 aa10.52□□□□□ -0.73
PPARGC1B-201ENST00000309241 CCDC9Q9Y3X0 531 aaKnown RBP10.52□□□□□ -0.73
PPARGC1B-201ENST00000309241 HTATSF1O43719 755 aaKnown RBP10.51□□□□□ -0.73
PPARGC1B-201ENST00000309241 BAZ1AQ9NRL2 1556 aaPredicted RBP10.51□□□□□ -0.73
PPARGC1B-201ENST00000309241 MLECQ14165 292 aa10.51□□□□□ -0.73
PPARGC1B-201ENST00000309241 NOC3LQ8WTT2 800 aaKnown RBP10.51□□□□□ -0.73
PPARGC1B-201ENST00000309241 RRP7BPQ9NSQ0 103 aa10.51□□□□□ -0.73
PPARGC1B-201ENST00000309241 HDGFP51858 240 aaKnown RBP10.5□□□□□ -0.73
PPARGC1B-201ENST00000309241 GOLGA6L4A6NEF3 574 aa10.5□□□□□ -0.73
PPARGC1B-201ENST00000309241 RGS3P49796 1198 aa10.5□□□□□ -0.73
PPARGC1B-201ENST00000309241 GBP4Q96PP9 640 aa10.5□□□□□ -0.73
PPARGC1B-201ENST00000309241 SOX12O15370 315 aa10.5□□□□□ -0.73
PPARGC1B-201ENST00000309241 CCDC34Q96HJ3 373 aa10.5□□□□□ -0.73
PPARGC1B-201ENST00000309241 KANK1Q14678 1352 aa10.49□□□□□ -0.73
PPARGC1B-201ENST00000309241 ROCK2O75116 1388 aaKnown RBP10.49□□□□□ -0.73
PPARGC1B-201ENST00000309241 G3V3G9 751 aa10.49□□□□□ -0.73
PPARGC1B-201ENST00000309241 PHF14O94880 888 aa10.49□□□□□ -0.73
PPARGC1B-201ENST00000309241 DCAF8Q5TAQ9 597 aa10.49□□□□□ -0.73
PPARGC1B-201ENST00000309241 ZNF330Q9Y3S2 320 aaPredicted RBP10.49□□□□□ -0.73
PPARGC1B-201ENST00000309241 MAP7D2Q96T17 732 aa10.49□□□□□ -0.73
PPARGC1B-201ENST00000309241 NEUROD2Q15784 382 aa10.48□□□□□ -0.73
PPARGC1B-201ENST00000309241 PLCB2Q00722 1185 aa10.48□□□□□ -0.73
PPARGC1B-201ENST00000309241 CSPP1Q1MSJ5 1256 aa10.48□□□□□ -0.73
PPARGC1B-201ENST00000309241 NGEFQ8N5V2 710 aa10.47□□□□□ -0.73
PPARGC1B-201ENST00000309241 CSB-PGBD3P0DP91 1061 aa10.47□□□□□ -0.73
PPARGC1B-201ENST00000309241 ZNF771Q7L3S4 317 aaPredicted RBP10.47□□□□□ -0.73
PPARGC1B-201ENST00000309241 AAMPQ13685 434 aa10.47□□□□□ -0.73
PPARGC1B-201ENST00000309241 TCERG1O14776 1098 aaKnown RBP10.46□□□□□ -0.73
PPARGC1B-201ENST00000309241 FAM13BQ9NYF5 915 aa10.46□□□□□ -0.73
PPARGC1B-201ENST00000309241 MCCP23508 829 aa10.46□□□□□ -0.73
PPARGC1B-201ENST00000309241 HIRIP3Q9BW71 556 aaPredicted RBP10.46□□□□□ -0.74
PPARGC1B-201ENST00000309241 U2SURPO15042 1029 aaKnown RBP10.45□□□□□ -0.74
PPARGC1B-201ENST00000309241 RRP9O43818 475 aaKnown RBP10.45□□□□□ -0.74
PPARGC1B-201ENST00000309241 GOLGA6L1Q8N7Z2 621 aa10.45□□□□□ -0.74
PPARGC1B-201ENST00000309241 SLKQ9H2G2 1235 aaPredicted RBP10.45□□□□□ -0.74
PPARGC1B-201ENST00000309241 CFDP1Q9UEE9 299 aaPredicted RBP10.44□□□□□ -0.74
PPARGC1B-201ENST00000309241 PAK3O75914 559 aaPredicted RBP10.44□□□□□ -0.74
PPARGC1B-201ENST00000309241 HDAC5Q9UQL6 1122 aa10.44□□□□□ -0.74
PPARGC1B-201ENST00000309241 HSCBQ8IWL3 235 aa10.44□□□□□ -0.74
PPARGC1B-201ENST00000309241 SPRYD3Q8NCJ5 442 aa10.43□□□□□ -0.74
PPARGC1B-201ENST00000309241 HSP90AB1P08238 724 aaKnown RBP10.43□□□□□ -0.74
PPARGC1B-201ENST00000309241 AEBP2Q6ZN18 517 aaPredicted RBP10.43□□□□□ -0.74
PPARGC1B-201ENST00000309241 SKOR2Q2VWA4 1001 aaPredicted RBP10.42□□□□□ -0.74
PPARGC1B-201ENST00000309241 DHX8Q14562 1220 aaKnown RBP10.42□□□□□ -0.74
PPARGC1B-201ENST00000309241 RTF1Q92541 710 aaKnown RBP10.42□□□□□ -0.74
PPARGC1B-201ENST00000309241 SETQ01105 290 aaPredicted RBP10.41□□□□□ -0.74
PPARGC1B-201ENST00000309241 PDE3BQ13370 1112 aa10.41□□□□□ -0.74
PPARGC1B-201ENST00000309241 CNKSR2Q8WXI2 1034 aa10.41□□□□□ -0.74
PPARGC1B-201ENST00000309241 FRAT1Q92837 279 aaPredicted RBP10.41□□□□□ -0.74
PPARGC1B-201ENST00000309241 SRPK2P78362 688 aaKnown RBP10.41□□□□□ -0.74
PPARGC1B-201ENST00000309241 VPS53Q5VIR6 699 aa10.41□□□□□ -0.74
PPARGC1B-201ENST00000309241 CALD1Q05682 793 aaKnown RBP10.41□□□□□ -0.74
PPARGC1B-201ENST00000309241 FAM43AQ8N2R8 423 aa10.4□□□□□ -0.74
PPARGC1B-201ENST00000309241 DRC7Q8IY82 874 aa10.4□□□□□ -0.74
PPARGC1B-201ENST00000309241 ZMYND15Q9H091 742 aa10.4□□□□□ -0.74
PPARGC1B-201ENST00000309241 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.4□□□□□ -0.74
PPARGC1B-201ENST00000309241 DCAF8L1A6NGE4 600 aa10.4□□□□□ -0.75
PPARGC1B-201ENST00000309241 KIF27Q86VH2 1401 aa10.4□□□□□ -0.75
PPARGC1B-201ENST00000309241 DDX11L8A8MPP1 907 aa10.39□□□□□ -0.75
PPARGC1B-201ENST00000309241 EIF4G1Q04637 1599 aaKnown RBP10.39□□□□□ -0.75
PPARGC1B-201ENST00000309241 KIAA1211Q6ZU35 1233 aa10.39□□□□□ -0.75
PPARGC1B-201ENST00000309241 SENP3-EIF4A1A0A087X0R7 540 aa10.39□□□□□ -0.75
PPARGC1B-201ENST00000309241 TPM4P67936 248 aa10.38□□□□□ -0.75
PPARGC1B-201ENST00000309241 GPS2Q13227 327 aa10.38□□□□□ -0.75
PPARGC1B-201ENST00000309241 GORABQ5T7V8 394 aa10.38□□□□□ -0.75
PPARGC1B-201ENST00000309241 CARD11Q9BXL7 1154 aa10.37□□□□□ -0.75
PPARGC1B-201ENST00000309241 CHMP3Q9Y3E7 222 aa10.37□□□□□ -0.75
PPARGC1B-201ENST00000309241 MAPK8IP2Q13387 824 aaPredicted RBP10.37□□□□□ -0.75
PPARGC1B-201ENST00000309241 TAF7LQ5H9L4 462 aa10.37□□□□□ -0.75
PPARGC1B-201ENST00000309241 TPM2P07951 284 aa10.36□□□□□ -0.75
PPARGC1B-201ENST00000309241 SAFB2Q14151 953 aaKnown RBP eCLIP10.36□□□□□ -0.75
PPARGC1B-201ENST00000309241 BAZ1BQ9UIG0 1483 aaKnown RBP10.36□□□□□ -0.75
PPARGC1B-201ENST00000309241 TAF3Q5VWG9 929 aa10.36□□□□□ -0.75
PPARGC1B-201ENST00000309241 MEX3CQ5U5Q3 659 aaKnown RBP10.36□□□□□ -0.75
PPARGC1B-201ENST00000309241 GTF2E1P29083 439 aaPredicted RBP10.36□□□□□ -0.75
PPARGC1B-201ENST00000309241 KIF3AQ9Y496 699 aa10.35□□□□□ -0.75
PPARGC1B-201ENST00000309241 TCEAL9Q9UHQ7 104 aa10.35□□□□□ -0.75
PPARGC1B-201ENST00000309241 RASSF8Q8NHQ8 419 aa10.35□□□□□ -0.75
PPARGC1B-201ENST00000309241 GPATCH3Q96I76 525 aa10.35□□□□□ -0.75
PPARGC1B-201ENST00000309241 KTN1Q86UP2 1357 aaKnown RBP10.35□□□□□ -0.75
PPARGC1B-201ENST00000309241 EIF3AQ14152 1382 aaKnown RBP10.34□□□□□ -0.75
PPARGC1B-201ENST00000309241 ATP6V1DQ9Y5K8 247 aa10.34□□□□□ -0.75
PPARGC1B-201ENST00000309241 MSH5O43196 834 aa10.34□□□□□ -0.75
PPARGC1B-201ENST00000309241 IPO8O15397 1037 aaKnown RBP10.34□□□□□ -0.75
PPARGC1B-201ENST00000309241 RALBP1Q15311 655 aa10.34□□□□□ -0.75
PPARGC1B-201ENST00000309241 CCNB3Q8WWL7 1395 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms