RNA–Protein interactions for RNA: ENST00000309083.6

PTMS-201, Transcript of parathymosin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTMS, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-201ENST00000309083 HNRNPUL2Q1KMD3 747 aaKnown RBP29.71■■■□□ 2.35
PTMS-201ENST00000309083 SIGLEC1Q9BZZ2 1709 aa29.69■■■□□ 2.34
PTMS-201ENST00000309083 ARID3CA6NKF2 412 aa29.69■■■□□ 2.34
PTMS-201ENST00000309083 PLPPR3Q6T4P5 718 aa29.68■■■□□ 2.34
PTMS-201ENST00000309083 PLEKHD1A6NEE1 506 aa29.67■■■□□ 2.34
PTMS-201ENST00000309083 ABCA9Q8IUA7 1624 aa29.67■■■□□ 2.34
PTMS-201ENST00000309083 LRRC9Q6ZRR7 1453 aa29.66■■■□□ 2.34
PTMS-201ENST00000309083 ARHGEF40Q8TER5 1519 aa29.66■■■□□ 2.34
PTMS-201ENST00000309083 MTUS2Q5JR59 1369 aa29.64■■■□□ 2.33
PTMS-201ENST00000309083 EHBP1L1Q8N3D4 1523 aa29.63■■■□□ 2.33
PTMS-201ENST00000309083 TROQ12816 1431 aaPredicted RBP29.62■■■□□ 2.33
PTMS-201ENST00000309083 STRCQ7RTU9 1775 aa29.6■■■□□ 2.33
PTMS-201ENST00000309083 KANK4Q5T7N3 995 aaPredicted RBP29.6■■■□□ 2.33
PTMS-201ENST00000309083 PHLDB1Q86UU1 1377 aa29.6■■■□□ 2.33
PTMS-201ENST00000309083 NEO1Q92859 1461 aa29.57■■■□□ 2.32
PTMS-201ENST00000309083 RICTORQ6R327 1708 aa29.52■■■□□ 2.32
PTMS-201ENST00000309083 TTC37Q6PGP7 1564 aa29.5■■■□□ 2.31
PTMS-201ENST00000309083 FER1L4A9Z1Z3 1794 aa29.49■■■□□ 2.31
PTMS-201ENST00000309083 SUPT6HQ7KZ85 1726 aaKnown RBP29.48■■■□□ 2.31
PTMS-201ENST00000309083 PREX1Q8TCU6 1659 aa29.47■■■□□ 2.31
PTMS-201ENST00000309083 KIF14Q15058 1648 aa29.47■■■□□ 2.31
PTMS-201ENST00000309083 YEATS2Q9ULM3 1422 aa29.45■■■□□ 2.31
PTMS-201ENST00000309083 NCOA2Q15596 1464 aa29.43■■■□□ 2.3
PTMS-201ENST00000309083 FANCAO15360 1455 aa29.42■■■□□ 2.3
PTMS-201ENST00000309083 PPARGC1BQ86YN6 1023 aaKnown RBP29.4■■■□□ 2.3
PTMS-201ENST00000309083 LTBP4Q8N2S1 1624 aa29.4■■■□□ 2.3
PTMS-201ENST00000309083 POGZQ7Z3K3 1410 aa29.36■■■□□ 2.29
PTMS-201ENST00000309083 DENND4BO75064 1496 aaPredicted RBP29.35■■■□□ 2.29
PTMS-201ENST00000309083 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.35■■■□□ 2.293e-12■■■■□ 19.8
PTMS-201ENST00000309083 MLECQ14165 292 aa29.34■■■□□ 2.29
PTMS-201ENST00000309083 ZMYM4Q5VZL5 1548 aa29.34■■■□□ 2.29
PTMS-201ENST00000309083 CCNB3Q8WWL7 1395 aa29.33■■■□□ 2.29
PTMS-201ENST00000309083 AKNAQ7Z591 1439 aa29.33■■■□□ 2.29
PTMS-201ENST00000309083 ZFYVE16Q7Z3T8 1539 aa29.31■■■□□ 2.28
PTMS-201ENST00000309083 ARHGEF12Q9NZN5 1544 aa29.3■■■□□ 2.28
PTMS-201ENST00000309083 MYOM3Q5VTT5 1437 aa29.29■■■□□ 2.28
PTMS-201ENST00000309083 CEBPAP49715 358 aaPredicted RBP29.28■■■□□ 2.28
PTMS-201ENST00000309083 DMRT2Q9Y5R5 561 aa29.28■■■□□ 2.28
PTMS-201ENST00000309083 GPATCH8Q9UKJ3 1502 aaKnown RBP29.27■■■□□ 2.28
PTMS-201ENST00000309083 MIA2Q96PC5 1412 aa29.26■■■□□ 2.27
PTMS-201ENST00000309083 ITSN2Q9NZM3 1697 aa29.25■■■□□ 2.27
PTMS-201ENST00000309083 PTPRTO14522 1441 aa29.25■■■□□ 2.27
PTMS-201ENST00000309083 IQSEC2Q5JU85 1478 aa29.24■■■□□ 2.27
PTMS-201ENST00000309083 PLCH2O75038 1416 aa29.24■■■□□ 2.27
PTMS-201ENST00000309083 MYO5CQ9NQX4 1742 aa29.21■■■□□ 2.27
PTMS-201ENST00000309083 PREX2Q70Z35 1606 aa29.2■■■□□ 2.27
PTMS-201ENST00000309083 CDC42BPAQ5VT25 1732 aa29.2■■■□□ 2.26
PTMS-201ENST00000309083 FGD6Q6ZV73 1430 aa29.2■■■□□ 2.26
PTMS-201ENST00000309083 RRBP1Q9P2E9 1410 aaKnown RBP29.19■■■□□ 2.26
PTMS-201ENST00000309083 CFDP1Q9UEE9 299 aaPredicted RBP29.18■■■□□ 2.26
PTMS-201ENST00000309083 UHRF1BP1Q6BDS2 1440 aa29.16■■■□□ 2.26
PTMS-201ENST00000309083 EFCAB2Q5VUJ9 269 aa29.14■■■□□ 2.26
PTMS-201ENST00000309083 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.13■■■□□ 2.258e-7■■■■□ 22.6
PTMS-201ENST00000309083 CFAP74Q9C0B2 1584 aa29.13■■■□□ 2.25
PTMS-201ENST00000309083 MAGI2Q86UL8 1455 aa29.13■■■□□ 2.25
PTMS-201ENST00000309083 ARHGAP5Q13017 1502 aa29.13■■■□□ 2.25
PTMS-201ENST00000309083 CDC42BPBQ9Y5S2 1711 aa29.12■■■□□ 2.25
PTMS-201ENST00000309083 SETD1BQ9UPS6 1966 aaKnown RBP29.11■■■□□ 2.25
PTMS-201ENST00000309083 TCOF1Q13428 1488 aaKnown RBP29.1■■■□□ 2.25
PTMS-201ENST00000309083 MED1Q15648 1581 aaPredicted RBP29.1■■■□□ 2.25
PTMS-201ENST00000309083 PLEKHH2Q8IVE3 1493 aa29.08■■■□□ 2.25
PTMS-201ENST00000309083 PTPN23Q9H3S7 1636 aa29.08■■■□□ 2.25
PTMS-201ENST00000309083 TRIM26Q12899 539 aaPredicted RBP29.04■■■□□ 2.24
PTMS-201ENST00000309083 KIAA1107Q9UPP5 1409 aa29.03■■■□□ 2.24
PTMS-201ENST00000309083 ATP10AO60312 1499 aa29.03■■■□□ 2.24
PTMS-201ENST00000309083 C3P01024 1663 aa29.02■■■□□ 2.24
PTMS-201ENST00000309083 CAMSAP2Q08AD1 1489 aa29.02■■■□□ 2.24
PTMS-201ENST00000309083 C9orf84Q5VXU9 1444 aa29.02■■■□□ 2.24
PTMS-201ENST00000309083 ZNF777Q9ULD5 760 aaPredicted RBP29.01■■■□□ 2.23
PTMS-201ENST00000309083 NCOA1Q15788 1441 aa29.01■■■□□ 2.23
PTMS-201ENST00000309083 SAMD9LQ8IVG5 1584 aa29.01■■■□□ 2.23
PTMS-201ENST00000309083 UBAP1LF5GYI3 381 aa28.99■■■□□ 2.23
PTMS-201ENST00000309083 FAM50AQ14320 339 aaKnown RBP28.99■■■□□ 2.23
PTMS-201ENST00000309083 ZNF644Q9H582 1327 aaPredicted RBP28.97■■■□□ 2.23
PTMS-201ENST00000309083 RSPH4AQ5TD94 716 aa28.97■■■□□ 2.23
PTMS-201ENST00000309083 ABCC1P33527 1531 aa28.95■■■□□ 2.23
PTMS-201ENST00000309083 SCAPERQ9BY12 1400 aa28.94■■■□□ 2.22
PTMS-201ENST00000309083 ZNF335Q9H4Z2 1342 aaPredicted RBP28.93■■■□□ 2.22
PTMS-201ENST00000309083 ARHGEF5Q12774 1597 aa28.92■■■□□ 2.22
PTMS-201ENST00000309083 MBD5Q9P267 1494 aa28.91■■■□□ 2.22
PTMS-201ENST00000309083 SYCP2Q9BX26 1530 aa28.89■■■□□ 2.21
PTMS-201ENST00000309083 DNMT1P26358 1616 aaKnown RBP28.87■■■□□ 2.21
PTMS-201ENST00000309083 CCDC141Q6ZP82 1450 aa28.86■■■□□ 2.21
PTMS-201ENST00000309083 HSPA1LP34931 641 aa28.86■■■□□ 2.21
PTMS-201ENST00000309083 HNRNPMP52272 730 aaKnown RBP eCLIP28.86■■■□□ 2.21
PTMS-201ENST00000309083 CAMSAP1Q5T5Y3 1602 aa28.86■■■□□ 2.21
PTMS-201ENST00000309083 DAPK1P53355 1430 aa28.86■■■□□ 2.21
PTMS-201ENST00000309083 ABCC5O15440 1437 aa28.85■■■□□ 2.21
PTMS-201ENST00000309083 SHANK2Q9UPX8 1470 aa28.83■■■□□ 2.21
PTMS-201ENST00000309083 TRAPPC8Q9Y2L5 1435 aa28.81■■■□□ 2.2
PTMS-201ENST00000309083 DIP2CQ9Y2E4 1556 aa28.8■■■□□ 2.2
PTMS-201ENST00000309083 ZNF518AQ6AHZ1 1483 aa28.8■■■□□ 2.2
PTMS-201ENST00000309083 TSPY4P0CV99 314 aa28.8■■■□□ 2.2
PTMS-201ENST00000309083 TSPY10P0CW01 314 aa28.8■■■□□ 2.2
PTMS-201ENST00000309083 NCKAP5LQ9HCH0 1330 aa28.76■■■□□ 2.19
PTMS-201ENST00000309083 CROCC2H7BZ55 1655 aa28.76■■■□□ 2.19
PTMS-201ENST00000309083 KDM5CP41229 1560 aa28.75■■■□□ 2.19
PTMS-201ENST00000309083 MAST1Q9Y2H9 1570 aa28.75■■■□□ 2.19
PTMS-201ENST00000309083 ITGAEP38570 1179 aa28.74■■■□□ 2.19
PTMS-201ENST00000309083 PTPRKQ15262 1439 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms