RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 YTHDC1Q96MU7 727 aaKnown RBP16.44■□□□□ 0.22
SCG2-201ENST00000305409 PPP1R15AO75807 674 aaPredicted RBP16.4■□□□□ 0.22
SCG2-201ENST00000305409 KCNH8Q96L42 1107 aa16.4■□□□□ 0.22
SCG2-201ENST00000305409 MPHOSPH9Q99550 1183 aa16.4■□□□□ 0.22
SCG2-201ENST00000305409 CAMSAP2Q08AD1 1489 aa16.4■□□□□ 0.22
SCG2-201ENST00000305409 TONSLQ96HA7 1378 aa16.39■□□□□ 0.21
SCG2-201ENST00000305409 HNRNPMP52272 730 aaKnown RBP eCLIP16.38■□□□□ 0.21
SCG2-201ENST00000305409 DENND4BO75064 1496 aaPredicted RBP16.36■□□□□ 0.21
SCG2-201ENST00000305409 AKNAQ7Z591 1439 aa16.34■□□□□ 0.21
SCG2-201ENST00000305409 ABCC10Q5T3U5 1492 aa16.34■□□□□ 0.21
SCG2-201ENST00000305409 DNMT1P26358 1616 aaKnown RBP16.34■□□□□ 0.21
SCG2-201ENST00000305409 SLC4A1APQ9BWU0 796 aaKnown RBP16.33■□□□□ 0.21
SCG2-201ENST00000305409 ROCK1Q13464 1354 aa16.32■□□□□ 0.2
SCG2-201ENST00000305409 PELP1Q8IZL8 1130 aaKnown RBP16.32■□□□□ 0.2
SCG2-201ENST00000305409 TIMELESSQ9UNS1 1208 aa16.32■□□□□ 0.2
SCG2-201ENST00000305409 GCC2Q8IWJ2 1684 aa16.31■□□□□ 0.2
SCG2-201ENST00000305409 NCOA1Q15788 1441 aa16.31■□□□□ 0.2
SCG2-201ENST00000305409 SHROOM2Q13796 1616 aa16.31■□□□□ 0.2
SCG2-201ENST00000305409 ADCY10Q96PN6 1610 aa16.3■□□□□ 0.2
SCG2-201ENST00000305409 DDX10Q13206 875 aaKnown RBP16.29■□□□□ 0.2
SCG2-201ENST00000305409 TSPY4P0CV99 314 aa16.28■□□□□ 0.2
SCG2-201ENST00000305409 TSPY10P0CW01 314 aa16.28■□□□□ 0.2
SCG2-201ENST00000305409 ITSN2Q9NZM3 1697 aa16.27■□□□□ 0.2
SCG2-201ENST00000305409 CDC42BPAQ5VT25 1732 aa16.27■□□□□ 0.2
SCG2-201ENST00000305409 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.19
SCG2-201ENST00000305409 ACIN1Q9UKV3 1341 aaKnown RBP16.26■□□□□ 0.19
SCG2-201ENST00000305409 CLASP1Q7Z460 1538 aa16.26■□□□□ 0.19
SCG2-201ENST00000305409 ANKRD30AQ9BXX3 1397 aa16.25■□□□□ 0.19
SCG2-201ENST00000305409 L3MBTL2Q969R5 705 aa16.25■□□□□ 0.19
SCG2-201ENST00000305409 C9orf84Q5VXU9 1444 aa16.24■□□□□ 0.19
SCG2-201ENST00000305409 ABCC2Q92887 1545 aa16.24■□□□□ 0.19
SCG2-201ENST00000305409 PKD2Q13563 968 aa16.22■□□□□ 0.19
SCG2-201ENST00000305409 CENPBP07199 599 aaPredicted RBP16.22■□□□□ 0.19
SCG2-201ENST00000305409 ANKRD50Q9ULJ7 1429 aa16.21■□□□□ 0.19
SCG2-201ENST00000305409 ANKRD30BQ9BXX2 1392 aa16.21■□□□□ 0.19
SCG2-201ENST00000305409 TTC37Q6PGP7 1564 aa16.2■□□□□ 0.18
SCG2-201ENST00000305409 KDM5BQ9UGL1 1544 aa16.19■□□□□ 0.18
SCG2-201ENST00000305409 MBD5Q9P267 1494 aa16.19■□□□□ 0.18
SCG2-201ENST00000305409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.19■□□□□ 0.18
SCG2-201ENST00000305409 PZPP20742 1482 aa16.19■□□□□ 0.18
SCG2-201ENST00000305409 ARHGAP5Q13017 1502 aa16.19■□□□□ 0.18
SCG2-201ENST00000305409 NUP155O75694 1391 aa16.18■□□□□ 0.18
SCG2-201ENST00000305409 KIF15Q9NS87 1388 aa16.18■□□□□ 0.18
SCG2-201ENST00000305409 ADGRL2O95490 1459 aa16.18■□□□□ 0.18
SCG2-201ENST00000305409 SAMD9LQ8IVG5 1584 aa16.17■□□□□ 0.18
SCG2-201ENST00000305409 NBPF8Q3BBV2 869 aa16.16■□□□□ 0.18
SCG2-201ENST00000305409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.16■□□□□ 0.18
SCG2-201ENST00000305409 CDC42BPBQ9Y5S2 1711 aa16.16■□□□□ 0.18
SCG2-201ENST00000305409 ZNF326Q5BKZ1 582 aaKnown RBP16.15■□□□□ 0.18
SCG2-201ENST00000305409 OSCARQ8IYS5 282 aa16.15■□□□□ 0.18
SCG2-201ENST00000305409 CROCC2H7BZ55 1655 aa16.15■□□□□ 0.18
SCG2-201ENST00000305409 SYCP2Q9BX26 1530 aa16.15■□□□□ 0.18
SCG2-201ENST00000305409 HSPA5P11021 654 aaKnown RBP16.14■□□□□ 0.17
SCG2-201ENST00000305409 ADGBQ8N7X0 1667 aa16.14■□□□□ 0.17
SCG2-201ENST00000305409 ZCCHC11Q5TAX3 1644 aaKnown RBP16.13■□□□□ 0.17
SCG2-201ENST00000305409 CCDC141Q6ZP82 1450 aa16.13■□□□□ 0.17
SCG2-201ENST00000305409 PREX2Q70Z35 1606 aa16.12■□□□□ 0.17
SCG2-201ENST00000305409 RPRD2Q5VT52 1461 aaKnown RBP16.11■□□□□ 0.17
SCG2-201ENST00000305409 EFCAB2Q5VUJ9 269 aa16.11■□□□□ 0.17
SCG2-201ENST00000305409 GTF3C3Q9Y5Q9 886 aa16.11■□□□□ 0.17
SCG2-201ENST00000305409 SHANK2Q9UPX8 1470 aa16.11■□□□□ 0.17
SCG2-201ENST00000305409 KIAA1107Q9UPP5 1409 aa16.1■□□□□ 0.17
SCG2-201ENST00000305409 ARHGEF12Q9NZN5 1544 aa16.1■□□□□ 0.17
SCG2-201ENST00000305409 AFAP1Q8N556 730 aa16.09■□□□□ 0.17
SCG2-201ENST00000305409 UHRF1BP1LA0JNW5 1464 aa16.09■□□□□ 0.17
SCG2-201ENST00000305409 RSPH4AQ5TD94 716 aa16.08■□□□□ 0.17
SCG2-201ENST00000305409 PLCH2O75038 1416 aa16.08■□□□□ 0.16
SCG2-201ENST00000305409 ARHGEF5Q12774 1597 aa16.07■□□□□ 0.16
SCG2-201ENST00000305409 EIF4G2P78344 907 aaKnown RBP eCLIP16.07■□□□□ 0.16
SCG2-201ENST00000305409 KDM2AQ9Y2K7 1162 aa16.06■□□□□ 0.16
SCG2-201ENST00000305409 MYT1Q01538 1121 aa16.06■□□□□ 0.16
SCG2-201ENST00000305409 TRAPPC8Q9Y2L5 1435 aa16.06■□□□□ 0.16
SCG2-201ENST00000305409 TEX14Q8IWB6 1497 aa16.05■□□□□ 0.16
SCG2-201ENST00000305409 C11orf95C9JLR9 678 aaPredicted RBP16.04■□□□□ 0.16
SCG2-201ENST00000305409 MYT1LQ9UL68 1186 aa16.04■□□□□ 0.16
SCG2-201ENST00000305409 MYO5CQ9NQX4 1742 aa16.03■□□□□ 0.16
SCG2-201ENST00000305409 PLEKHH2Q8IVE3 1493 aa16.03■□□□□ 0.16
SCG2-201ENST00000305409 WASHC2AQ641Q2 1341 aa16.03■□□□□ 0.16
SCG2-201ENST00000305409 RGL3Q3MIN7 710 aa16.01■□□□□ 0.15
SCG2-201ENST00000305409 WDR7Q9Y4E6 1490 aa16.01■□□□□ 0.15
SCG2-201ENST00000305409 ANP32CO43423 234 aa16■□□□□ 0.15
SCG2-201ENST00000305409 NPM1P06748 294 aaKnown RBP eCLIP16■□□□□ 0.15
SCG2-201ENST00000305409 ASXL2Q76L83 1435 aa16■□□□□ 0.15
SCG2-201ENST00000305409 SPAG9O60271 1321 aaKnown RBP15.99■□□□□ 0.15
SCG2-201ENST00000305409 DCAF11Q8TEB1 546 aa15.98■□□□□ 0.15
SCG2-201ENST00000305409 POLR3GLQ9BT43 218 aa15.97■□□□□ 0.15
SCG2-201ENST00000305409 FAM135AQ9P2D6 1515 aa15.97■□□□□ 0.15
SCG2-201ENST00000305409 CNGB1Q14028 1251 aaPredicted RBP15.95■□□□□ 0.14
SCG2-201ENST00000305409 FANCAO15360 1455 aa15.94■□□□□ 0.14
SCG2-201ENST00000305409 ABCC1P33527 1531 aa15.94■□□□□ 0.14
SCG2-201ENST00000305409 KDM5DQ9BY66 1539 aa15.93■□□□□ 0.14
SCG2-201ENST00000305409 SCAPERQ9BY12 1400 aa15.92■□□□□ 0.14
SCG2-201ENST00000305409 CYB5RLQ6IPT4 315 aa15.91■□□□□ 0.14
SCG2-201ENST00000305409 MAST1Q9Y2H9 1570 aa15.91■□□□□ 0.14
SCG2-201ENST00000305409 CARD11Q9BXL7 1154 aa15.9■□□□□ 0.14
SCG2-201ENST00000305409 PLA2R1Q13018 1463 aa15.9■□□□□ 0.14
SCG2-201ENST00000305409 DUOX2Q9NRD8 1548 aa15.89■□□□□ 0.13
SCG2-201ENST00000305409 CCDC144AA2RUR9 1427 aa15.89■□□□□ 0.13
SCG2-201ENST00000305409 CCDC7Q96M83 1385 aa15.89■□□□□ 0.13
SCG2-201ENST00000305409 KIF7Q2M1P5 1343 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms