RNA–Protein interactions for RNA: ENST00000304623.12

CTNND2-201, Transcript of catenin delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND2, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-201ENST00000304623 TULP1O00294 542 aaPredicted RBP25.21■■□□□ 1.63
CTNND2-201ENST00000304623 RCAN3Q9UKA8 241 aa25.2■■□□□ 1.62
CTNND2-201ENST00000304623 KANK1Q14678 1352 aa25.19■■□□□ 1.62
CTNND2-201ENST00000304623 RWDD1Q9H446 243 aaPredicted RBP25.17■■□□□ 1.62
CTNND2-201ENST00000304623 KIAA2012Q0VF49 1180 aa25.16■■□□□ 1.62
CTNND2-201ENST00000304623 RALBP1Q15311 655 aa25.16■■□□□ 1.62
CTNND2-201ENST00000304623 LMOD2Q6P5Q4 547 aa25.16■■□□□ 1.62
CTNND2-201ENST00000304623 GOLGA2Q08379 1002 aa25.14■■□□□ 1.61
CTNND2-201ENST00000304623 SRPK2P78362 688 aaKnown RBP25.12■■□□□ 1.61
CTNND2-201ENST00000304623 KIAA1211Q6ZU35 1233 aa25.11■■□□□ 1.61
CTNND2-201ENST00000304623 CALD1Q05682 793 aaKnown RBP25.09■■□□□ 1.61
CTNND2-201ENST00000304623 SYAP1Q96A49 352 aaPredicted RBP25.09■■□□□ 1.61
CTNND2-201ENST00000304623 TSHZ2Q9NRE2 1034 aa25.09■■□□□ 1.61
CTNND2-201ENST00000304623 IPO9Q96P70 1041 aaKnown RBP25.08■■□□□ 1.61
CTNND2-201ENST00000304623 VPS8Q8N3P4 1428 aa25.08■■□□□ 1.61
CTNND2-201ENST00000304623 ARHGAP35Q9NRY4 1499 aa25.08■■□□□ 1.61
CTNND2-201ENST00000304623 RTF1Q92541 710 aaKnown RBP25.08■■□□□ 1.6
CTNND2-201ENST00000304623 NPHP1O15259 732 aa25.07■■□□□ 1.6
CTNND2-201ENST00000304623 PMFBP1Q8TBY8 1022 aa25.07■■□□□ 1.6
CTNND2-201ENST00000304623 SLKQ9H2G2 1235 aaPredicted RBP25.07■■□□□ 1.6
CTNND2-201ENST00000304623 HDGFP51858 240 aaKnown RBP25.06■■□□□ 1.6
CTNND2-201ENST00000304623 CARMIL1Q5VZK9 1371 aa25.06■■□□□ 1.6
CTNND2-201ENST00000304623 HTATSF1O43719 755 aaKnown RBP25.06■■□□□ 1.6
CTNND2-201ENST00000304623 GOLGA6L3A6NEY3 463 aa25.05■■□□□ 1.6
CTNND2-201ENST00000304623 GZF1Q9H116 711 aaPredicted RBP25.05■■□□□ 1.6
CTNND2-201ENST00000304623 PKD2Q13563 968 aa25.03■■□□□ 1.6
CTNND2-201ENST00000304623 GNL2Q13823 731 aaKnown RBP25.02■■□□□ 1.6
CTNND2-201ENST00000304623 ITPRIPQ8IWB1 547 aa25.02■■□□□ 1.6
CTNND2-201ENST00000304623 HDGFL2Q7Z4V5 671 aaPredicted RBP25.01■■□□□ 1.59
CTNND2-201ENST00000304623 APBB1O00213 710 aa24.99■■□□□ 1.59
CTNND2-201ENST00000304623 U2AF1L5P0DN76 240 aaPredicted RBP24.98■■□□□ 1.59
CTNND2-201ENST00000304623 U2AF1Q01081 240 aaKnown RBP eCLIP24.98■■□□□ 1.59
CTNND2-201ENST00000304623 SOGA1O94964 1423 aa24.97■■□□□ 1.59
CTNND2-201ENST00000304623 PDE3BQ13370 1112 aa24.96■■□□□ 1.59
CTNND2-201ENST00000304623 ROCK2O75116 1388 aaKnown RBP24.96■■□□□ 1.59
CTNND2-201ENST00000304623 NACADO15069 1562 aa24.95■■□□□ 1.59
CTNND2-201ENST00000304623 RAB3GAP2Q9H2M9 1393 aa24.95■■□□□ 1.58
CTNND2-201ENST00000304623 BAZ1AQ9NRL2 1556 aaPredicted RBP24.94■■□□□ 1.58
CTNND2-201ENST00000304623 MFAP1P55081 439 aaKnown RBP24.94■■□□□ 1.58
CTNND2-201ENST00000304623 CHMP4AQ9BY43 222 aa24.94■■□□□ 1.58
CTNND2-201ENST00000304623 CUX2O14529 1486 aa24.93■■□□□ 1.58
CTNND2-201ENST00000304623 SOX12O15370 315 aa24.93■■□□□ 1.58
CTNND2-201ENST00000304623 MPHOSPH9Q99550 1183 aa24.92■■□□□ 1.58
CTNND2-201ENST00000304623 TPM4P67936 248 aa24.92■■□□□ 1.58
CTNND2-201ENST00000304623 SAFB2Q14151 953 aaKnown RBP eCLIP24.91■■□□□ 1.58
CTNND2-201ENST00000304623 EIF4G1Q04637 1599 aaKnown RBP24.91■■□□□ 1.58
CTNND2-201ENST00000304623 CSPP1Q1MSJ5 1256 aa24.9■■□□□ 1.58
CTNND2-201ENST00000304623 KANK4Q5T7N3 995 aaPredicted RBP24.89■■□□□ 1.58
CTNND2-201ENST00000304623 USP35Q9P2H5 1018 aa24.88■■□□□ 1.57
CTNND2-201ENST00000304623 FOXD1Q16676 465 aa24.88■■□□□ 1.57
CTNND2-201ENST00000304623 HMMRO75330 724 aa24.87■■□□□ 1.57
CTNND2-201ENST00000304623 NLRP13Q86W25 1043 aa24.86■■□□□ 1.57
CTNND2-201ENST00000304623 SMC4Q9NTJ3 1288 aa24.86■■□□□ 1.57
CTNND2-201ENST00000304623 EIF3AQ14152 1382 aaKnown RBP24.86■■□□□ 1.57
CTNND2-201ENST00000304623 CCDC34Q96HJ3 373 aa24.84■■□□□ 1.57
CTNND2-201ENST00000304623 HDAC5Q9UQL6 1122 aa24.84■■□□□ 1.57
CTNND2-201ENST00000304623 AMER1Q5JTC6 1135 aaPredicted RBP24.83■■□□□ 1.57
CTNND2-201ENST00000304623 STK31Q9BXU1 1019 aa24.83■■□□□ 1.57
CTNND2-201ENST00000304623 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.83■■□□□ 1.57
CTNND2-201ENST00000304623 GPATCH3Q96I76 525 aa24.83■■□□□ 1.56
CTNND2-201ENST00000304623 CENPJQ9HC77 1338 aaPredicted RBP24.82■■□□□ 1.56
CTNND2-201ENST00000304623 STK26Q9P289 416 aa24.82■■□□□ 1.56
CTNND2-201ENST00000304623 FMN1Q68DA7 1419 aa24.82■■□□□ 1.56
CTNND2-201ENST00000304623 NUP155O75694 1391 aa24.82■■□□□ 1.56
CTNND2-201ENST00000304623 PHLDB1Q86UU1 1377 aa24.82■■□□□ 1.56
CTNND2-201ENST00000304623 PHF14O94880 888 aa24.81■■□□□ 1.56
CTNND2-201ENST00000304623 CLSTN1O94985 981 aa24.81■■□□□ 1.56
CTNND2-201ENST00000304623 ARID3AQ99856 593 aa24.81■■□□□ 1.56
CTNND2-201ENST00000304623 ANKRD30AQ9BXX3 1397 aa24.8■■□□□ 1.56
CTNND2-201ENST00000304623 DDX11L8A8MPP1 907 aa24.8■■□□□ 1.56
CTNND2-201ENST00000304623 SPAG9O60271 1321 aaKnown RBP24.79■■□□□ 1.56
CTNND2-201ENST00000304623 TNNT3P45378 269 aaPredicted RBP24.79■■□□□ 1.56
CTNND2-201ENST00000304623 TRIM6-TRIM34B2RNG4 842 aa24.77■■□□□ 1.56
CTNND2-201ENST00000304623 ISY1Q9ULR0 285 aaKnown RBP24.77■■□□□ 1.56
CTNND2-201ENST00000304623 ST18O60284 1047 aa24.77■■□□□ 1.56
CTNND2-201ENST00000304623 NOC3LQ8WTT2 800 aaKnown RBP24.76■■□□□ 1.55
CTNND2-201ENST00000304623 GGT6Q6P531 493 aa24.75■■□□□ 1.55
CTNND2-201ENST00000304623 GOLGA6L1Q8N7Z2 621 aa24.75■■□□□ 1.55
CTNND2-201ENST00000304623 ERCC6Q03468 1493 aa24.74■■□□□ 1.55
CTNND2-201ENST00000304623 L3MBTL2Q969R5 705 aa24.74■■□□□ 1.55
CTNND2-201ENST00000304623 CLUAP1Q96AJ1 413 aa24.73■■□□□ 1.55
CTNND2-201ENST00000304623 HSP90B1P14625 803 aaKnown RBP24.73■■□□□ 1.55
CTNND2-201ENST00000304623 LMOD3Q0VAK6 560 aa24.73■■□□□ 1.55
CTNND2-201ENST00000304623 CENPQQ7L2Z9 268 aaPredicted RBP24.73■■□□□ 1.55
CTNND2-201ENST00000304623 RSPH6AQ9H0K4 717 aa24.72■■□□□ 1.55
CTNND2-201ENST00000304623 TERF2IPQ9NYB0 399 aa24.72■■□□□ 1.55
CTNND2-201ENST00000304623 KIF15Q9NS87 1388 aa24.71■■□□□ 1.55
CTNND2-201ENST00000304623 FAM161AQ3B820 660 aa24.7■■□□□ 1.54
CTNND2-201ENST00000304623 MLECQ14165 292 aa24.69■■□□□ 1.54
CTNND2-201ENST00000304623 GORABQ5T7V8 394 aa24.69■■□□□ 1.54
CTNND2-201ENST00000304623 CARMIL2Q6F5E8 1435 aa24.69■■□□□ 1.54
CTNND2-201ENST00000304623 FOXD4L1Q9NU39 408 aa24.69■■□□□ 1.54
CTNND2-201ENST00000304623 CCDC146Q8IYE0 955 aa24.69■■□□□ 1.54
CTNND2-201ENST00000304623 KIF3AQ9Y496 699 aa24.68■■□□□ 1.54
CTNND2-201ENST00000304623 MYBBP1AQ9BQG0 1328 aaKnown RBP24.68■■□□□ 1.54
CTNND2-201ENST00000304623 PDE4AP27815 886 aa24.68■■□□□ 1.54
CTNND2-201ENST00000304623 SKOR2Q2VWA4 1001 aaPredicted RBP24.68■■□□□ 1.54
CTNND2-201ENST00000304623 HSP90AA2PQ14568 343 aaPredicted RBP24.67■■□□□ 1.54
CTNND2-201ENST00000304623 KIF16BQ96L93 1317 aa24.67■■□□□ 1.54
CTNND2-201ENST00000304623 CECR2Q9BXF3 1484 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms