RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 FHOD3Q2V2M9 1422 aa9.4□□□□□ -0.9
ZNF440-201ENST00000304060 C9orf84Q5VXU9 1444 aa9.4□□□□□ -0.9
ZNF440-201ENST00000304060 PTPRTO14522 1441 aa9.39□□□□□ -0.91
ZNF440-201ENST00000304060 ATP10AO60312 1499 aa9.39□□□□□ -0.91
ZNF440-201ENST00000304060 ATP10BO94823 1461 aa9.38□□□□□ -0.91
ZNF440-201ENST00000304060 ABCA8O94911 1581 aa9.38□□□□□ -0.91
ZNF440-201ENST00000304060 PPRC1Q5VV67 1664 aaKnown RBP9.38□□□□□ -0.91
ZNF440-201ENST00000304060 MYT1Q01538 1121 aa9.37□□□□□ -0.91
ZNF440-201ENST00000304060 IQSEC2Q5JU85 1478 aa9.37□□□□□ -0.91
ZNF440-201ENST00000304060 PPP6R1Q9UPN7 881 aa9.36□□□□□ -0.91
ZNF440-201ENST00000304060 SPATA31D1Q6ZQQ2 1576 aa9.36□□□□□ -0.91
ZNF440-201ENST00000304060 RIMS1Q86UR5 1692 aaKnown RBP9.36□□□□□ -0.91
ZNF440-201ENST00000304060 ARHGEF40Q8TER5 1519 aa9.36□□□□□ -0.91
ZNF440-201ENST00000304060 MADDQ8WXG6 1647 aa9.35□□□□□ -0.91
ZNF440-201ENST00000304060 FMN1Q68DA7 1419 aa9.35□□□□□ -0.91
ZNF440-201ENST00000304060 ADAMTSL3P82987 1691 aa9.34□□□□□ -0.91
ZNF440-201ENST00000304060 ABCA9Q8IUA7 1624 aa9.34□□□□□ -0.91
ZNF440-201ENST00000304060 BCORL1Q5H9F3 1711 aa9.34□□□□□ -0.91
ZNF440-201ENST00000304060 ZNF777Q9ULD5 760 aaPredicted RBP9.34□□□□□ -0.91
ZNF440-201ENST00000304060 PIP4K2BP78356 416 aa9.33□□□□□ -0.92
ZNF440-201ENST00000304060 CTTNBP2Q8WZ74 1663 aa9.33□□□□□ -0.92
ZNF440-201ENST00000304060 TRAPPC8Q9Y2L5 1435 aa9.33□□□□□ -0.92
ZNF440-201ENST00000304060 CEBPAP49715 358 aaPredicted RBP9.32□□□□□ -0.92
ZNF440-201ENST00000304060 SETD1BQ9UPS6 1966 aaKnown RBP9.32□□□□□ -0.92
ZNF440-201ENST00000304060 ZNF518AQ6AHZ1 1483 aa9.32□□□□□ -0.92
ZNF440-201ENST00000304060 RAPGEF6Q8TEU7 1601 aa9.31□□□□□ -0.92
ZNF440-201ENST00000304060 SPAG9O60271 1321 aaKnown RBP9.31□□□□□ -0.92
ZNF440-201ENST00000304060 PLCH2O75038 1416 aa9.3□□□□□ -0.92
ZNF440-201ENST00000304060 ANKLE2Q86XL3 938 aa9.3□□□□□ -0.92
ZNF440-201ENST00000304060 THEMISQ8N1K5 641 aaPredicted RBP9.3□□□□□ -0.92
ZNF440-201ENST00000304060 ARHGAP5Q13017 1502 aa9.29□□□□□ -0.92
ZNF440-201ENST00000304060 ILDR2Q71H61 639 aa9.29□□□□□ -0.92
ZNF440-201ENST00000304060 STAG3Q9UJ98 1225 aa9.28□□□□□ -0.92
ZNF440-201ENST00000304060 PRXQ9BXM0 1461 aa9.28□□□□□ -0.92
ZNF440-201ENST00000304060 GGT6Q6P531 493 aa9.27□□□□□ -0.92
ZNF440-201ENST00000304060 PTPRKQ15262 1439 aa9.27□□□□□ -0.93
ZNF440-201ENST00000304060 ZMYM4Q5VZL5 1548 aa9.26□□□□□ -0.93
ZNF440-201ENST00000304060 PLEKHH2Q8IVE3 1493 aa9.26□□□□□ -0.93
ZNF440-201ENST00000304060 RTN4Q9NQC3 1192 aaKnown RBP9.25□□□□□ -0.93
ZNF440-201ENST00000304060 CFDP1Q9UEE9 299 aaPredicted RBP9.25□□□□□ -0.93
ZNF440-201ENST00000304060 EID1Q9Y6B2 187 aa9.25□□□□□ -0.93
ZNF440-201ENST00000304060 NPATQ14207 1427 aa9.25□□□□□ -0.93
ZNF440-201ENST00000304060 PREX1Q8TCU6 1659 aa9.25□□□□□ -0.93
ZNF440-201ENST00000304060 AFAP1Q8N556 730 aa9.24□□□□□ -0.93
ZNF440-201ENST00000304060 BCANQ96GW7 911 aa9.24□□□□□ -0.93
ZNF440-201ENST00000304060 FER1L4A9Z1Z3 1794 aa9.24□□□□□ -0.93
ZNF440-201ENST00000304060 TSPY4P0CV99 314 aa9.23□□□□□ -0.93
ZNF440-201ENST00000304060 TSPY10P0CW01 314 aa9.23□□□□□ -0.93
ZNF440-201ENST00000304060 TTC37Q6PGP7 1564 aa9.23□□□□□ -0.93
ZNF440-201ENST00000304060 TROQ12816 1431 aaPredicted RBP9.23□□□□□ -0.93
ZNF440-201ENST00000304060 RSPH4AQ5TD94 716 aa9.23□□□□□ -0.93
ZNF440-201ENST00000304060 NCKAP5LQ9HCH0 1330 aa9.22□□□□□ -0.93
ZNF440-201ENST00000304060 HDGFP51858 240 aaKnown RBP9.22□□□□□ -0.93
ZNF440-201ENST00000304060 NUP153P49790 1475 aaKnown RBP9.22□□□□□ -0.93
ZNF440-201ENST00000304060 KIF14Q15058 1648 aa9.21□□□□□ -0.93
ZNF440-201ENST00000304060 HECW1Q76N89 1606 aa9.21□□□□□ -0.93
ZNF440-201ENST00000304060 CCDC18Q5T9S5 1454 aa9.21□□□□□ -0.94
ZNF440-201ENST00000304060 MEX3CQ5U5Q3 659 aaKnown RBP9.21□□□□□ -0.94
ZNF440-201ENST00000304060 CCNB3Q8WWL7 1395 aa9.21□□□□□ -0.94
ZNF440-201ENST00000304060 ARHGEF12Q9NZN5 1544 aa9.2□□□□□ -0.94
ZNF440-201ENST00000304060 NCOA1Q15788 1441 aa9.2□□□□□ -0.94
ZNF440-201ENST00000304060 AGLP35573 1532 aa9.2□□□□□ -0.94
ZNF440-201ENST00000304060 APLP2Q06481 763 aa9.2□□□□□ -0.94
ZNF440-201ENST00000304060 ZMYM3Q14202 1370 aa9.19□□□□□ -0.94
ZNF440-201ENST00000304060 SENP3Q9H4L4 574 aaPredicted RBP9.19□□□□□ -0.94
ZNF440-201ENST00000304060 WASHC2CQ9Y4E1 1318 aa9.19□□□□□ -0.94
ZNF440-201ENST00000304060 ZNF335Q9H4Z2 1342 aaPredicted RBP9.18□□□□□ -0.94
ZNF440-201ENST00000304060 HSPA1LP34931 641 aa9.18□□□□□ -0.94
ZNF440-201ENST00000304060 MTUS2Q5JR59 1369 aa9.18□□□□□ -0.94
ZNF440-201ENST00000304060 MLH3Q9UHC1 1453 aa9.18□□□□□ -0.94
ZNF440-201ENST00000304060 C14orf37Q86TY3 774 aa9.18□□□□□ -0.94
ZNF440-201ENST00000304060 CPS1P31327 1500 aa9.17□□□□□ -0.94
ZNF440-201ENST00000304060 PLA2R1Q13018 1463 aa9.17□□□□□ -0.94
ZNF440-201ENST00000304060 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.17□□□□□ -0.94
ZNF440-201ENST00000304060 FAM135AQ9P2D6 1515 aa9.17□□□□□ -0.94
ZNF440-201ENST00000304060 TNRQ92752 1358 aa9.16□□□□□ -0.94
ZNF440-201ENST00000304060 KIF3BO15066 747 aa9.15□□□□□ -0.94
ZNF440-201ENST00000304060 SAMD9Q5K651 1589 aa9.14□□□□□ -0.95
ZNF440-201ENST00000304060 RICTORQ6R327 1708 aa9.13□□□□□ -0.95
ZNF440-201ENST00000304060 MYO5CQ9NQX4 1742 aa9.13□□□□□ -0.95
ZNF440-201ENST00000304060 CAMSAP1Q5T5Y3 1602 aa9.13□□□□□ -0.95
ZNF440-201ENST00000304060 PPP1R15AO75807 674 aaPredicted RBP9.13□□□□□ -0.95
ZNF440-201ENST00000304060 FRMPD1Q5SYB0 1578 aa9.12□□□□□ -0.95
ZNF440-201ENST00000304060 KCNA4P22459 653 aa9.12□□□□□ -0.95
ZNF440-201ENST00000304060 KANK1Q14678 1352 aa9.12□□□□□ -0.95
ZNF440-201ENST00000304060 HNRNPMP52272 730 aaKnown RBP eCLIP9.11□□□□□ -0.95
ZNF440-201ENST00000304060 REREQ9P2R6 1566 aa9.11□□□□□ -0.95
ZNF440-201ENST00000304060 A2ML1A8K2U0 1454 aa9.11□□□□□ -0.95
ZNF440-201ENST00000304060 A2MP01023 1474 aa9.11□□□□□ -0.95
ZNF440-201ENST00000304060 ZNF772Q68DY9 489 aaPredicted RBP9.11□□□□□ -0.95
ZNF440-201ENST00000304060 CDK13Q14004 1512 aaKnown RBP9.1□□□□□ -0.95
ZNF440-201ENST00000304060 PROSER2Q86WR7 435 aaPredicted RBP9.09□□□□□ -0.95
ZNF440-201ENST00000304060 SHANK2Q9UPX8 1470 aa9.09□□□□□ -0.95
ZNF440-201ENST00000304060 NPHP4O75161 1426 aaPredicted RBP9.08□□□□□ -0.96
ZNF440-201ENST00000304060 TXNDC2Q86VQ3 553 aa9.08□□□□□ -0.96
ZNF440-201ENST00000304060 KIAA1107Q9UPP5 1409 aa9.08□□□□□ -0.96
ZNF440-201ENST00000304060 DCAF8L1A6NGE4 600 aa9.08□□□□□ -0.96
ZNF440-201ENST00000304060 NLRP1Q9C000 1473 aa9.07□□□□□ -0.96
ZNF440-201ENST00000304060 MSH6P52701 1360 aa9.05□□□□□ -0.96
ZNF440-201ENST00000304060 DIP2CQ9Y2E4 1556 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms