RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ABCC10Q5T3U5 1492 aa21.09■□□□□ 0.97
SHCBP1-201ENST00000303383 DNMT1P26358 1616 aaKnown RBP21.09■□□□□ 0.97
SHCBP1-201ENST00000303383 AKNAQ7Z591 1439 aa21.08■□□□□ 0.96
SHCBP1-201ENST00000303383 UHRF1BP1LA0JNW5 1464 aa21.07■□□□□ 0.96
SHCBP1-201ENST00000303383 TSPY4P0CV99 314 aa21.06■□□□□ 0.96
SHCBP1-201ENST00000303383 TSPY10P0CW01 314 aa21.06■□□□□ 0.96
SHCBP1-201ENST00000303383 CDC42BPAQ5VT25 1732 aa21.06■□□□□ 0.96
SHCBP1-201ENST00000303383 ROCK1Q13464 1354 aa21.05■□□□□ 0.96
SHCBP1-201ENST00000303383 MAPKBP1O60336 1514 aa21.05■□□□□ 0.96
SHCBP1-201ENST00000303383 ZNF316A6NFI3 1004 aaPredicted RBP21.04■□□□□ 0.96
SHCBP1-201ENST00000303383 GCC2Q8IWJ2 1684 aa21.03■□□□□ 0.96
SHCBP1-201ENST00000303383 SIN3AQ96ST3 1273 aa21.03■□□□□ 0.96
SHCBP1-201ENST00000303383 ACIN1Q9UKV3 1341 aaKnown RBP21.02■□□□□ 0.96
SHCBP1-201ENST00000303383 ZCCHC11Q5TAX3 1644 aaKnown RBP21.02■□□□□ 0.96
SHCBP1-201ENST00000303383 NPM1P06748 294 aaKnown RBP eCLIP21.02■□□□□ 0.96
SHCBP1-201ENST00000303383 KDM5BQ9UGL1 1544 aa21.02■□□□□ 0.95
SHCBP1-201ENST00000303383 HNRNPMP52272 730 aaKnown RBP eCLIP21.01■□□□□ 0.952e-6■■■■□ 23.8
SHCBP1-201ENST00000303383 ANKRD30AQ9BXX3 1397 aa21■□□□□ 0.95
SHCBP1-201ENST00000303383 ARHGAP5Q13017 1502 aa20.99■□□□□ 0.95
SHCBP1-201ENST00000303383 PELP1Q8IZL8 1130 aaKnown RBP20.99■□□□□ 0.95
SHCBP1-201ENST00000303383 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.96■□□□□ 0.95
SHCBP1-201ENST00000303383 PREX2Q70Z35 1606 aa20.95■□□□□ 0.94
SHCBP1-201ENST00000303383 RSPH4AQ5TD94 716 aa20.95■□□□□ 0.94
SHCBP1-201ENST00000303383 TTC37Q6PGP7 1564 aa20.95■□□□□ 0.94
SHCBP1-201ENST00000303383 NCOA1Q15788 1441 aa20.94■□□□□ 0.94
SHCBP1-201ENST00000303383 C9orf84Q5VXU9 1444 aa20.93■□□□□ 0.94
SHCBP1-201ENST00000303383 EFCAB2Q5VUJ9 269 aa20.93■□□□□ 0.94
SHCBP1-201ENST00000303383 DIEXFQ68CQ4 756 aaKnown RBP20.93■□□□□ 0.94
SHCBP1-201ENST00000303383 ADGBQ8N7X0 1667 aa20.92■□□□□ 0.94
SHCBP1-201ENST00000303383 MPHOSPH9Q99550 1183 aa20.92■□□□□ 0.94
SHCBP1-201ENST00000303383 TIMELESSQ9UNS1 1208 aa20.92■□□□□ 0.94
SHCBP1-201ENST00000303383 CDC42BPBQ9Y5S2 1711 aa20.92■□□□□ 0.94
SHCBP1-201ENST00000303383 TONSLQ96HA7 1378 aa20.92■□□□□ 0.94
SHCBP1-201ENST00000303383 KDM6BO15054 1643 aa20.91■□□□□ 0.94
SHCBP1-201ENST00000303383 MYO5CQ9NQX4 1742 aa20.91■□□□□ 0.94
SHCBP1-201ENST00000303383 CROCC2H7BZ55 1655 aa20.9■□□□□ 0.94
SHCBP1-201ENST00000303383 SLC4A1APQ9BWU0 796 aaKnown RBP20.9■□□□□ 0.94
SHCBP1-201ENST00000303383 ADGRL2O95490 1459 aa20.89■□□□□ 0.93
SHCBP1-201ENST00000303383 CCDC141Q6ZP82 1450 aa20.89■□□□□ 0.93
SHCBP1-201ENST00000303383 SHANK2Q9UPX8 1470 aa20.89■□□□□ 0.93
SHCBP1-201ENST00000303383 SAMD9LQ8IVG5 1584 aa20.89■□□□□ 0.93
SHCBP1-201ENST00000303383 WDR7Q9Y4E6 1490 aa20.88■□□□□ 0.93
SHCBP1-201ENST00000303383 PLEKHH2Q8IVE3 1493 aa20.88■□□□□ 0.93
SHCBP1-201ENST00000303383 PLCH2O75038 1416 aa20.87■□□□□ 0.93
SHCBP1-201ENST00000303383 ANKRD50Q9ULJ7 1429 aa20.87■□□□□ 0.93
SHCBP1-201ENST00000303383 ARHGEF5Q12774 1597 aa20.86■□□□□ 0.93
SHCBP1-201ENST00000303383 SYCP2Q9BX26 1530 aa20.85■□□□□ 0.93
SHCBP1-201ENST00000303383 MBD5Q9P267 1494 aa20.84■□□□□ 0.93
SHCBP1-201ENST00000303383 KIF15Q9NS87 1388 aa20.84■□□□□ 0.93
SHCBP1-201ENST00000303383 ASXL2Q76L83 1435 aa20.83■□□□□ 0.93
SHCBP1-201ENST00000303383 FOXD1Q16676 465 aa20.83■□□□□ 0.92
SHCBP1-201ENST00000303383 KIAA1107Q9UPP5 1409 aa20.81■□□□□ 0.92
SHCBP1-201ENST00000303383 MYT1LQ9UL68 1186 aa20.79■□□□□ 0.92
SHCBP1-201ENST00000303383 PPP1R15AO75807 674 aaPredicted RBP20.78■□□□□ 0.92
SHCBP1-201ENST00000303383 NUP155O75694 1391 aa20.77■□□□□ 0.92
SHCBP1-201ENST00000303383 CYB5RLQ6IPT4 315 aa20.76■□□□□ 0.91
SHCBP1-201ENST00000303383 PKD2Q13563 968 aa20.73■□□□□ 0.91
SHCBP1-201ENST00000303383 FANCAO15360 1455 aa20.72■□□□□ 0.91
SHCBP1-201ENST00000303383 SPAG9O60271 1321 aaKnown RBP20.72■□□□□ 0.91
SHCBP1-201ENST00000303383 DENND4BO75064 1496 aaPredicted RBP20.71■□□□□ 0.91
SHCBP1-201ENST00000303383 ARAP3Q8WWN8 1544 aa20.71■□□□□ 0.91
SHCBP1-201ENST00000303383 ABCC1P33527 1531 aa20.7■□□□□ 0.9
SHCBP1-201ENST00000303383 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.7■□□□□ 0.9
SHCBP1-201ENST00000303383 ARHGEF12Q9NZN5 1544 aa20.7■□□□□ 0.9
SHCBP1-201ENST00000303383 ABCA9Q8IUA7 1624 aa20.7■□□□□ 0.9
SHCBP1-201ENST00000303383 PZPP20742 1482 aa20.69■□□□□ 0.9
SHCBP1-201ENST00000303383 MYT1Q01538 1121 aa20.69■□□□□ 0.9
SHCBP1-201ENST00000303383 AFAP1Q8N556 730 aa20.69■□□□□ 0.9
SHCBP1-201ENST00000303383 ANKRD30BQ9BXX2 1392 aa20.69■□□□□ 0.9
SHCBP1-201ENST00000303383 MAST1Q9Y2H9 1570 aa20.68■□□□□ 0.9
SHCBP1-201ENST00000303383 TRAPPC8Q9Y2L5 1435 aa20.68■□□□□ 0.9
SHCBP1-201ENST00000303383 ADGRL1O94910 1474 aa20.65■□□□□ 0.9
SHCBP1-201ENST00000303383 SCAPERQ9BY12 1400 aa20.64■□□□□ 0.9
SHCBP1-201ENST00000303383 CD109Q6YHK3 1445 aa20.64■□□□□ 0.89
SHCBP1-201ENST00000303383 L3MBTL2Q969R5 705 aa20.62■□□□□ 0.89
SHCBP1-201ENST00000303383 PLXNC1O60486 1568 aa20.62■□□□□ 0.89
SHCBP1-201ENST00000303383 DUOX2Q9NRD8 1548 aa20.62■□□□□ 0.89
SHCBP1-201ENST00000303383 RPRD2Q5VT52 1461 aaKnown RBP20.61■□□□□ 0.89
SHCBP1-201ENST00000303383 RIMBP3CA6NJZ7 1639 aa20.59■□□□□ 0.89
SHCBP1-201ENST00000303383 RIMBP3BA6NNM3 1639 aa20.59■□□□□ 0.89
SHCBP1-201ENST00000303383 RIMBP3Q9UFD9 1639 aa20.59■□□□□ 0.89
SHCBP1-201ENST00000303383 RTEL1-TNFRSF6BF6WH68 1400 aa20.58■□□□□ 0.88
SHCBP1-201ENST00000303383 ERBINQ96RT1 1412 aa20.57■□□□□ 0.88
SHCBP1-201ENST00000303383 KDM5DQ9BY66 1539 aa20.57■□□□□ 0.88
SHCBP1-201ENST00000303383 HIRIP3Q9BW71 556 aaPredicted RBP20.56■□□□□ 0.88
SHCBP1-201ENST00000303383 FAM135AQ9P2D6 1515 aa20.55■□□□□ 0.88
SHCBP1-201ENST00000303383 ZNF326Q5BKZ1 582 aaKnown RBP20.52■□□□□ 0.88
SHCBP1-201ENST00000303383 CFAP74Q9C0B2 1584 aa20.52■□□□□ 0.88
SHCBP1-201ENST00000303383 ATP7AQ04656 1500 aa20.52■□□□□ 0.88
SHCBP1-201ENST00000303383 ZFYVE16Q7Z3T8 1539 aa20.52■□□□□ 0.88
SHCBP1-201ENST00000303383 MIER1Q8N108 512 aa20.51■□□□□ 0.87
SHCBP1-201ENST00000303383 ZNF518AQ6AHZ1 1483 aa20.5■□□□□ 0.87
SHCBP1-201ENST00000303383 UNC13BO14795 1591 aa20.49■□□□□ 0.87
SHCBP1-201ENST00000303383 KIF3BO15066 747 aa20.49■□□□□ 0.87
SHCBP1-201ENST00000303383 KANK1Q14678 1352 aa20.48■□□□□ 0.87
SHCBP1-201ENST00000303383 FAM69CQ0P6D2 419 aa20.47■□□□□ 0.87
SHCBP1-201ENST00000303383 EIF4G2P78344 907 aaKnown RBP eCLIP20.47■□□□□ 0.87
SHCBP1-201ENST00000303383 TEX14Q8IWB6 1497 aa20.46■□□□□ 0.87
SHCBP1-201ENST00000303383 CCDC144AA2RUR9 1427 aa20.46■□□□□ 0.87
SHCBP1-201ENST00000303383 DDX10Q13206 875 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms