RNA–Protein interactions for RNA: ENST00000302424.11

TRIM8-201, Transcript of tripartite motif containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM8, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-201ENST00000302424 POLR3GLQ9BT43 218 aa25.08■■□□□ 1.61
TRIM8-201ENST00000302424 ADAMTS12P58397 1594 aa25.07■■□□□ 1.6
TRIM8-201ENST00000302424 FAM9BQ8IZU0 186 aa25.04■■□□□ 1.6
TRIM8-201ENST00000302424 TCOF1Q13428 1488 aaKnown RBP25.04■■□□□ 1.6
TRIM8-201ENST00000302424 WDR62O43379 1518 aa25.04■■□□□ 1.6
TRIM8-201ENST00000302424 MRC2Q9UBG0 1479 aa25.03■■□□□ 1.6
TRIM8-201ENST00000302424 PRG4Q92954 1404 aaPredicted RBP25■■□□□ 1.59
TRIM8-201ENST00000302424 CHMP7Q8WUX9 453 aaPredicted RBP25■■□□□ 1.59
TRIM8-201ENST00000302424 ABCC5O15440 1437 aa24.98■■□□□ 1.59
TRIM8-201ENST00000302424 DAPK1P53355 1430 aa24.98■■□□□ 1.59
TRIM8-201ENST00000302424 CFDP1Q9UEE9 299 aaPredicted RBP24.98■■□□□ 1.59
TRIM8-201ENST00000302424 DISP1Q96F81 1524 aa24.97■■□□□ 1.59
TRIM8-201ENST00000302424 NUP153P49790 1475 aaKnown RBP24.96■■□□□ 1.59
TRIM8-201ENST00000302424 MIA2Q96PC5 1412 aa24.96■■□□□ 1.59
TRIM8-201ENST00000302424 GCC2Q8IWJ2 1684 aa24.96■■□□□ 1.59
TRIM8-201ENST00000302424 ANKRD30BQ9BXX2 1392 aa24.93■■□□□ 1.58
TRIM8-201ENST00000302424 PLB1Q6P1J6 1458 aa24.93■■□□□ 1.58
TRIM8-201ENST00000302424 CDK11AQ9UQ88 783 aaPredicted RBP24.92■■□□□ 1.58
TRIM8-201ENST00000302424 MRS2Q9HD23 443 aa24.9■■□□□ 1.58
TRIM8-201ENST00000302424 KIAA0586Q9BVV6 1533 aa24.89■■□□□ 1.57
TRIM8-201ENST00000302424 KIAA0556O60303 1618 aa24.88■■□□□ 1.57
TRIM8-201ENST00000302424 PRKRIP1Q9H875 184 aaPredicted RBP24.88■■□□□ 1.57
TRIM8-201ENST00000302424 CCDC7Q96M83 1385 aa24.88■■□□□ 1.57
TRIM8-201ENST00000302424 IFT140Q96RY7 1462 aa24.86■■□□□ 1.57
TRIM8-201ENST00000302424 RBM19Q9Y4C8 960 aaKnown RBP24.86■■□□□ 1.57
TRIM8-201ENST00000302424 KIF7Q2M1P5 1343 aa24.85■■□□□ 1.57
TRIM8-201ENST00000302424 GRIN2AQ12879 1464 aa24.85■■□□□ 1.57
TRIM8-201ENST00000302424 PKD2Q13563 968 aa24.85■■□□□ 1.57
TRIM8-201ENST00000302424 CNTLNQ9NXG0 1405 aa24.83■■□□□ 1.57
TRIM8-201ENST00000302424 AKNAQ7Z591 1439 aa24.83■■□□□ 1.57
TRIM8-201ENST00000302424 ERCC6Q03468 1493 aa24.82■■□□□ 1.56
TRIM8-201ENST00000302424 JPH4Q96JJ6 628 aa24.82■■□□□ 1.56
TRIM8-201ENST00000302424 KDM2AQ9Y2K7 1162 aa24.81■■□□□ 1.56
TRIM8-201ENST00000302424 RPRD2Q5VT52 1461 aaKnown RBP24.81■■□□□ 1.56
TRIM8-201ENST00000302424 RAPGEF6Q8TEU7 1601 aa24.81■■□□□ 1.56
TRIM8-201ENST00000302424 EIF4G3O43432 1585 aaKnown RBP24.8■■□□□ 1.56
TRIM8-201ENST00000302424 NCOA1Q15788 1441 aa24.78■■□□□ 1.56
TRIM8-201ENST00000302424 DNMT1P26358 1616 aaKnown RBP24.78■■□□□ 1.56
TRIM8-201ENST00000302424 ROCK1Q13464 1354 aa24.78■■□□□ 1.56
TRIM8-201ENST00000302424 CAMSAP2Q08AD1 1489 aa24.77■■□□□ 1.56
TRIM8-201ENST00000302424 TEX14Q8IWB6 1497 aa24.77■■□□□ 1.56
TRIM8-201ENST00000302424 KIF14Q15058 1648 aa24.77■■□□□ 1.56
TRIM8-201ENST00000302424 MYT1Q01538 1121 aa24.75■■□□□ 1.55
TRIM8-201ENST00000302424 TROQ12816 1431 aaPredicted RBP24.75■■□□□ 1.55
TRIM8-201ENST00000302424 PZPP20742 1482 aa24.74■■□□□ 1.55
TRIM8-201ENST00000302424 HNRNPMP52272 730 aaKnown RBP eCLIP24.74■■□□□ 1.55
TRIM8-201ENST00000302424 GPATCH8Q9UKJ3 1502 aaKnown RBP24.73■■□□□ 1.55
TRIM8-201ENST00000302424 CEP170Q5SW79 1584 aa24.71■■□□□ 1.55
TRIM8-201ENST00000302424 PLEKHD1A6NEE1 506 aa24.71■■□□□ 1.55
TRIM8-201ENST00000302424 B4GALNT3Q6L9W6 998 aa24.68■■□□□ 1.54
TRIM8-201ENST00000302424 ANP32EQ9BTT0 268 aa24.68■■□□□ 1.54
TRIM8-201ENST00000302424 NUP155O75694 1391 aa24.68■■□□□ 1.54
TRIM8-201ENST00000302424 SPATA31E1Q6ZUB1 1445 aa24.67■■□□□ 1.54
TRIM8-201ENST00000302424 USP47Q96K76 1375 aa24.65■■□□□ 1.54
TRIM8-201ENST00000302424 ANKRD50Q9ULJ7 1429 aa24.62■■□□□ 1.53
TRIM8-201ENST00000302424 ANKRD30AQ9BXX3 1397 aa24.62■■□□□ 1.53
TRIM8-201ENST00000302424 DCAF11Q8TEB1 546 aa24.62■■□□□ 1.53
TRIM8-201ENST00000302424 CARD11Q9BXL7 1154 aa24.61■■□□□ 1.53
TRIM8-201ENST00000302424 KIAA1107Q9UPP5 1409 aa24.61■■□□□ 1.53
TRIM8-201ENST00000302424 TSPY4P0CV99 314 aa24.6■■□□□ 1.53
TRIM8-201ENST00000302424 TSPY10P0CW01 314 aa24.6■■□□□ 1.53
TRIM8-201ENST00000302424 SYNJ2O15056 1496 aa24.6■■□□□ 1.53
TRIM8-201ENST00000302424 RGL3Q3MIN7 710 aa24.59■■□□□ 1.53
TRIM8-201ENST00000302424 CARMIL2Q6F5E8 1435 aa24.59■■□□□ 1.53
TRIM8-201ENST00000302424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.58■■□□□ 1.53
TRIM8-201ENST00000302424 ST20-MTHFSA0A0A6YYL1 179 aa24.57■■□□□ 1.52
TRIM8-201ENST00000302424 SALL2Q9Y467 1007 aaPredicted RBP24.56■■□□□ 1.52
TRIM8-201ENST00000302424 MSH5O43196 834 aa24.56■■□□□ 1.52
TRIM8-201ENST00000302424 BCORL1Q5H9F3 1711 aa24.56■■□□□ 1.52
TRIM8-201ENST00000302424 SENP3Q9H4L4 574 aaPredicted RBP24.54■■□□□ 1.52
TRIM8-201ENST00000302424 ATP10BO94823 1461 aa24.54■■□□□ 1.52
TRIM8-201ENST00000302424 MAGI1Q96QZ7 1491 aaPredicted RBP24.54■■□□□ 1.52
TRIM8-201ENST00000302424 ZBED9Q6R2W3 1325 aa24.54■■□□□ 1.52
TRIM8-201ENST00000302424 DHX29Q7Z478 1369 aaKnown RBP24.53■■□□□ 1.52
TRIM8-201ENST00000302424 C9orf84Q5VXU9 1444 aa24.52■■□□□ 1.52
TRIM8-201ENST00000302424 PPP4R2Q9NY27 417 aa24.5■■□□□ 1.51
TRIM8-201ENST00000302424 ITSN2Q9NZM3 1697 aa24.49■■□□□ 1.51
TRIM8-201ENST00000302424 KIF15Q9NS87 1388 aa24.48■■□□□ 1.51
TRIM8-201ENST00000302424 TMC1Q8TDI8 760 aa24.48■■□□□ 1.51
TRIM8-201ENST00000302424 MBD5Q9P267 1494 aa24.46■■□□□ 1.51
TRIM8-201ENST00000302424 ADGBQ8N7X0 1667 aa24.46■■□□□ 1.51
TRIM8-201ENST00000302424 CDC42BPAQ5VT25 1732 aa24.45■■□□□ 1.5
TRIM8-201ENST00000302424 NUP160Q12769 1436 aa24.45■■□□□ 1.5
TRIM8-201ENST00000302424 ADGRL2O95490 1459 aa24.44■■□□□ 1.5
TRIM8-201ENST00000302424 NBPF1Q3BBV0 1214 aa24.43■■□□□ 1.5
TRIM8-201ENST00000302424 ABCC10Q5T3U5 1492 aa24.41■■□□□ 1.5
TRIM8-201ENST00000302424 PTPRGP23470 1445 aa24.41■■□□□ 1.5
TRIM8-201ENST00000302424 CROCC2H7BZ55 1655 aa24.41■■□□□ 1.5
TRIM8-201ENST00000302424 PNISRQ8TF01 805 aaKnown RBP24.38■■□□□ 1.49
TRIM8-201ENST00000302424 ROCK2O75116 1388 aaKnown RBP24.37■■□□□ 1.49
TRIM8-201ENST00000302424 KDM5CP41229 1560 aa24.37■■□□□ 1.49
TRIM8-201ENST00000302424 ADCY10Q96PN6 1610 aa24.37■■□□□ 1.49
TRIM8-201ENST00000302424 ABCA8O94911 1581 aa24.36■■□□□ 1.49
TRIM8-201ENST00000302424 POLR1AO95602 1720 aaPredicted RBP24.33■■□□□ 1.49
TRIM8-201ENST00000302424 NUDCQ9Y266 331 aa24.33■■□□□ 1.48
TRIM8-201ENST00000302424 CC2D1BQ5T0F9 858 aaKnown RBP24.31■■□□□ 1.48
TRIM8-201ENST00000302424 RALGAPBQ86X10 1494 aa24.29■■□□□ 1.48
TRIM8-201ENST00000302424 CCDC136Q96JN2 1154 aa24.27■■□□□ 1.48
TRIM8-201ENST00000302424 UHRF1BP1Q6BDS2 1440 aa24.26■■□□□ 1.47
TRIM8-201ENST00000302424 PLPPR3Q6T4P5 718 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms