RNA–Protein interactions for RNA: ENST00000301050.6

CACNB3-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB3, Length 2,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-201ENST00000301050 ANP32CO43423 234 aa22.03■■□□□ 1.12
CACNB3-201ENST00000301050 TCOF1Q13428 1488 aaKnown RBP22.02■■□□□ 1.12
CACNB3-201ENST00000301050 IRX6P78412 446 aaPredicted RBP22.01■■□□□ 1.11
CACNB3-201ENST00000301050 HFM1A2PYH4 1435 aa22■■□□□ 1.11
CACNB3-201ENST00000301050 CHD1O14646 1710 aa22■■□□□ 1.11
CACNB3-201ENST00000301050 CHIC2Q9UKJ5 165 aa21.97■■□□□ 1.11
CACNB3-201ENST00000301050 NAIPQ13075 1403 aa21.97■■□□□ 1.11
CACNB3-201ENST00000301050 PRG4Q92954 1404 aaPredicted RBP21.97■■□□□ 1.11
CACNB3-201ENST00000301050 SIN3AQ96ST3 1273 aa21.96■■□□□ 1.11
CACNB3-201ENST00000301050 MIA2Q96PC5 1412 aa21.96■■□□□ 1.11
CACNB3-201ENST00000301050 HIRIP3Q9BW71 556 aaPredicted RBP21.94■■□□□ 1.1
CACNB3-201ENST00000301050 RRP7BPQ9NSQ0 103 aa21.93■■□□□ 1.1
CACNB3-201ENST00000301050 TROQ12816 1431 aaPredicted RBP21.92■■□□□ 1.1
CACNB3-201ENST00000301050 ABCA8O94911 1581 aa21.91■■□□□ 1.1
CACNB3-201ENST00000301050 KIF14Q15058 1648 aa21.89■■□□□ 1.1
CACNB3-201ENST00000301050 ZNF644Q9H582 1327 aaPredicted RBP21.89■■□□□ 1.09
CACNB3-201ENST00000301050 NBR1Q14596 966 aa21.89■■□□□ 1.09
CACNB3-201ENST00000301050 UACAQ9BZF9 1416 aa21.87■■□□□ 1.09
CACNB3-201ENST00000301050 ERICH6BQ5W0A0 696 aa21.87■■□□□ 1.09
CACNB3-201ENST00000301050 NOP58Q9Y2X3 529 aaKnown RBP21.87■■□□□ 1.09
CACNB3-201ENST00000301050 GCC2Q8IWJ2 1684 aa21.87■■□□□ 1.09
CACNB3-201ENST00000301050 PPP4R2Q9NY27 417 aa21.86■■□□□ 1.09
CACNB3-201ENST00000301050 SALL2Q9Y467 1007 aaPredicted RBP21.86■■□□□ 1.09
CACNB3-201ENST00000301050 HNRNPUQ00839 825 aaKnown RBP eCLIP21.86■■□□□ 1.09
CACNB3-201ENST00000301050 KDM6BO15054 1643 aa21.85■■□□□ 1.09
CACNB3-201ENST00000301050 ADCY10Q96PN6 1610 aa21.84■■□□□ 1.09
CACNB3-201ENST00000301050 DAPK1P53355 1430 aa21.83■■□□□ 1.09
CACNB3-201ENST00000301050 ATP10BO94823 1461 aa21.83■■□□□ 1.09
CACNB3-201ENST00000301050 PTPRGP23470 1445 aa21.83■■□□□ 1.08
CACNB3-201ENST00000301050 PAK3O75914 559 aaPredicted RBP21.83■■□□□ 1.08
CACNB3-201ENST00000301050 DNMT1P26358 1616 aaKnown RBP21.81■■□□□ 1.08
CACNB3-201ENST00000301050 ABCC5O15440 1437 aa21.81■■□□□ 1.08
CACNB3-201ENST00000301050 ITSN2Q9NZM3 1697 aa21.8■■□□□ 1.08
CACNB3-201ENST00000301050 GPATCH8Q9UKJ3 1502 aaKnown RBP21.8■■□□□ 1.08
CACNB3-201ENST00000301050 AKNAQ7Z591 1439 aa21.8■■□□□ 1.08
CACNB3-201ENST00000301050 CFDP1Q9UEE9 299 aaPredicted RBP21.79■■□□□ 1.08
CACNB3-201ENST00000301050 TIMELESSQ9UNS1 1208 aa21.79■■□□□ 1.08
CACNB3-201ENST00000301050 SHROOM2Q13796 1616 aa21.79■■□□□ 1.08
CACNB3-201ENST00000301050 CAMSAP2Q08AD1 1489 aa21.79■■□□□ 1.08
CACNB3-201ENST00000301050 PLEKHD1A6NEE1 506 aa21.78■■□□□ 1.08
CACNB3-201ENST00000301050 ZNF777Q9ULD5 760 aaPredicted RBP21.78■■□□□ 1.08
CACNB3-201ENST00000301050 ERCC6L2Q5T890 1561 aa21.77■■□□□ 1.08
CACNB3-201ENST00000301050 B4GALNT3Q6L9W6 998 aa21.73■■□□□ 1.07
CACNB3-201ENST00000301050 ROCK1Q13464 1354 aa21.71■■□□□ 1.07
CACNB3-201ENST00000301050 CDC42BPAQ5VT25 1732 aa21.71■■□□□ 1.07
CACNB3-201ENST00000301050 ABCC10Q5T3U5 1492 aa21.71■■□□□ 1.07
CACNB3-201ENST00000301050 DENND4BO75064 1496 aaPredicted RBP21.7■■□□□ 1.07
CACNB3-201ENST00000301050 TONSLQ96HA7 1378 aa21.69■■□□□ 1.06
CACNB3-201ENST00000301050 IL27Q8NEV9 243 aa21.69■■□□□ 1.06
CACNB3-201ENST00000301050 CCDC136Q96JN2 1154 aa21.69■■□□□ 1.06
CACNB3-201ENST00000301050 CLASP1Q7Z460 1538 aa21.66■■□□□ 1.06
CACNB3-201ENST00000301050 RTL5Q5HYW3 569 aaPredicted RBP21.66■■□□□ 1.06
CACNB3-201ENST00000301050 CROCC2H7BZ55 1655 aa21.65■■□□□ 1.06
CACNB3-201ENST00000301050 MPHOSPH9Q99550 1183 aa21.65■■□□□ 1.06
CACNB3-201ENST00000301050 ADGBQ8N7X0 1667 aa21.64■■□□□ 1.06
CACNB3-201ENST00000301050 FOXD1Q16676 465 aa21.63■■□□□ 1.05
CACNB3-201ENST00000301050 IPO9Q96P70 1041 aaKnown RBP21.6■■□□□ 1.05
CACNB3-201ENST00000301050 NCOA1Q15788 1441 aa21.6■■□□□ 1.05
CACNB3-201ENST00000301050 ABCC2Q92887 1545 aa21.6■■□□□ 1.05
CACNB3-201ENST00000301050 RTN4Q9NQC3 1192 aaKnown RBP21.6■■□□□ 1.05
CACNB3-201ENST00000301050 ADGRL2O95490 1459 aa21.57■■□□□ 1.04
CACNB3-201ENST00000301050 ANP32AP39687 249 aaKnown RBP21.56■■□□□ 1.04
CACNB3-201ENST00000301050 KDM5BQ9UGL1 1544 aa21.56■■□□□ 1.04
CACNB3-201ENST00000301050 CDC42BPBQ9Y5S2 1711 aa21.55■■□□□ 1.04
CACNB3-201ENST00000301050 ZBTB47Q9UFB7 747 aaPredicted RBP21.54■■□□□ 1.04
CACNB3-201ENST00000301050 HNRNPMP52272 730 aaKnown RBP eCLIP21.54■■□□□ 1.04
CACNB3-201ENST00000301050 TTC37Q6PGP7 1564 aa21.54■■□□□ 1.04
CACNB3-201ENST00000301050 PREX2Q70Z35 1606 aa21.54■■□□□ 1.04
CACNB3-201ENST00000301050 ANKRD30AQ9BXX3 1397 aa21.54■■□□□ 1.04
CACNB3-201ENST00000301050 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.53■■□□□ 1.04
CACNB3-201ENST00000301050 C9orf84Q5VXU9 1444 aa21.52■■□□□ 1.04
CACNB3-201ENST00000301050 SLC4A1APQ9BWU0 796 aaKnown RBP21.52■■□□□ 1.04
CACNB3-201ENST00000301050 SAMD9LQ8IVG5 1584 aa21.52■■□□□ 1.04
CACNB3-201ENST00000301050 UBE2Q2Q8WVN8 375 aa21.52■■□□□ 1.03
CACNB3-201ENST00000301050 CCDC184Q52MB2 194 aa21.51■■□□□ 1.03
CACNB3-201ENST00000301050 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.51■■□□□ 1.03
CACNB3-201ENST00000301050 SHANK2Q9UPX8 1470 aa21.5■■□□□ 1.03
CACNB3-201ENST00000301050 PZPP20742 1482 aa21.49■■□□□ 1.03
CACNB3-201ENST00000301050 ZCCHC11Q5TAX3 1644 aaKnown RBP21.49■■□□□ 1.03
CACNB3-201ENST00000301050 WASHC2AQ641Q2 1341 aa21.49■■□□□ 1.03
CACNB3-201ENST00000301050 ANKRD30BQ9BXX2 1392 aa21.48■■□□□ 1.03
CACNB3-201ENST00000301050 MBD5Q9P267 1494 aa21.47■■□□□ 1.03
CACNB3-201ENST00000301050 ARHGEF5Q12774 1597 aa21.47■■□□□ 1.03
CACNB3-201ENST00000301050 ANKRD50Q9ULJ7 1429 aa21.47■■□□□ 1.03
CACNB3-201ENST00000301050 ARHGAP5Q13017 1502 aa21.46■■□□□ 1.03
CACNB3-201ENST00000301050 TSPY4P0CV99 314 aa21.46■■□□□ 1.03
CACNB3-201ENST00000301050 TSPY10P0CW01 314 aa21.46■■□□□ 1.03
CACNB3-201ENST00000301050 ZBED9Q6R2W3 1325 aa21.46■■□□□ 1.03
CACNB3-201ENST00000301050 UHRF1BP1LA0JNW5 1464 aa21.44■■□□□ 1.02
CACNB3-201ENST00000301050 SYCP2Q9BX26 1530 aa21.43■■□□□ 1.02
CACNB3-201ENST00000301050 MYO5CQ9NQX4 1742 aa21.43■■□□□ 1.02
CACNB3-201ENST00000301050 CCDC141Q6ZP82 1450 aa21.43■■□□□ 1.02
CACNB3-201ENST00000301050 FAM9BQ8IZU0 186 aa21.42■■□□□ 1.02
CACNB3-201ENST00000301050 L3MBTL2Q969R5 705 aa21.42■■□□□ 1.02
CACNB3-201ENST00000301050 RPRD2Q5VT52 1461 aaKnown RBP21.41■■□□□ 1.02
CACNB3-201ENST00000301050 KIF15Q9NS87 1388 aa21.41■■□□□ 1.02
CACNB3-201ENST00000301050 PKD2Q13563 968 aa21.37■■□□□ 1.01
CACNB3-201ENST00000301050 KIAA1107Q9UPP5 1409 aa21.37■■□□□ 1.01
CACNB3-201ENST00000301050 C11orf95C9JLR9 678 aaPredicted RBP21.36■■□□□ 1.01
CACNB3-201ENST00000301050 NUP155O75694 1391 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 185.9 ms