RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 FKBP8Q14318 412 aa18.09■□□□□ 0.49
HIF3A-204ENST00000300862 ABCC5O15440 1437 aa18.08■□□□□ 0.48
HIF3A-204ENST00000300862 EIF4G3O43432 1585 aaKnown RBP18.08■□□□□ 0.48
HIF3A-204ENST00000300862 WASHC2AQ641Q2 1341 aa18.08■□□□□ 0.48
HIF3A-204ENST00000300862 PRG4Q92954 1404 aaPredicted RBP18.07■□□□□ 0.48
HIF3A-204ENST00000300862 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
HIF3A-204ENST00000300862 CDK11AQ9UQ88 783 aaPredicted RBP18.07■□□□□ 0.48
HIF3A-204ENST00000300862 ZNF777Q9ULD5 760 aaPredicted RBP18.06■□□□□ 0.48
HIF3A-204ENST00000300862 PRKCSHP14314 528 aaPredicted RBP18.05■□□□□ 0.48
HIF3A-204ENST00000300862 SLC4A1APQ9BWU0 796 aaKnown RBP18.05■□□□□ 0.48
HIF3A-204ENST00000300862 RAPGEF6Q8TEU7 1601 aa18.05■□□□□ 0.48
HIF3A-204ENST00000300862 PLB1Q6P1J6 1458 aa18.04■□□□□ 0.48
HIF3A-204ENST00000300862 EIF4G2P78344 907 aaKnown RBP eCLIP18.04■□□□□ 0.48
HIF3A-204ENST00000300862 CFDP1Q9UEE9 299 aaPredicted RBP18.03■□□□□ 0.48
HIF3A-204ENST00000300862 C11orf95C9JLR9 678 aaPredicted RBP18.01■□□□□ 0.47
HIF3A-204ENST00000300862 NBPF8Q3BBV2 869 aa18.01■□□□□ 0.47
HIF3A-204ENST00000300862 ROCK1Q13464 1354 aa18.01■□□□□ 0.47
HIF3A-204ENST00000300862 ANKRD30BQ9BXX2 1392 aa18.01■□□□□ 0.47
HIF3A-204ENST00000300862 ANP32EQ9BTT0 268 aa18■□□□□ 0.47
HIF3A-204ENST00000300862 JPH4Q96JJ6 628 aa17.99■□□□□ 0.47
HIF3A-204ENST00000300862 DNMT1P26358 1616 aaKnown RBP17.99■□□□□ 0.47
HIF3A-204ENST00000300862 CEP170Q5SW79 1584 aa17.99■□□□□ 0.47
HIF3A-204ENST00000300862 TROQ12816 1431 aaPredicted RBP17.98■□□□□ 0.47
HIF3A-204ENST00000300862 HNRNPUQ00839 825 aaKnown RBP eCLIP17.96■□□□□ 0.47
HIF3A-204ENST00000300862 MAGI1Q96QZ7 1491 aaPredicted RBP17.96■□□□□ 0.47
HIF3A-204ENST00000300862 SYNJ2O15056 1496 aa17.95■□□□□ 0.46
HIF3A-204ENST00000300862 CAMSAP2Q08AD1 1489 aa17.95■□□□□ 0.46
HIF3A-204ENST00000300862 NEFLP07196 543 aa17.95■□□□□ 0.46
HIF3A-204ENST00000300862 RPRD2Q5VT52 1461 aaKnown RBP17.95■□□□□ 0.46
HIF3A-204ENST00000300862 CCDC184Q52MB2 194 aa17.94■□□□□ 0.46
HIF3A-204ENST00000300862 GPATCH8Q9UKJ3 1502 aaKnown RBP17.94■□□□□ 0.46
HIF3A-204ENST00000300862 KIF14Q15058 1648 aa17.93■□□□□ 0.46
HIF3A-204ENST00000300862 NCOA1Q15788 1441 aa17.92■□□□□ 0.46
HIF3A-204ENST00000300862 TEX14Q8IWB6 1497 aa17.91■□□□□ 0.46
HIF3A-204ENST00000300862 ZNF326Q5BKZ1 582 aaKnown RBP17.9■□□□□ 0.46
HIF3A-204ENST00000300862 CARMIL2Q6F5E8 1435 aa17.9■□□□□ 0.46
HIF3A-204ENST00000300862 CCDC7Q96M83 1385 aa17.9■□□□□ 0.46
HIF3A-204ENST00000300862 PZPP20742 1482 aa17.9■□□□□ 0.46
HIF3A-204ENST00000300862 CNTLNQ9NXG0 1405 aa17.88■□□□□ 0.45
HIF3A-204ENST00000300862 PLEKHD1A6NEE1 506 aa17.88■□□□□ 0.45
HIF3A-204ENST00000300862 SLC24A1O60721 1099 aa17.88■□□□□ 0.45
HIF3A-204ENST00000300862 PKD2Q13563 968 aa17.88■□□□□ 0.45
HIF3A-204ENST00000300862 CNGB1Q14028 1251 aaPredicted RBP17.87■□□□□ 0.45
HIF3A-204ENST00000300862 NUP160Q12769 1436 aa17.87■□□□□ 0.45
HIF3A-204ENST00000300862 KIF7Q2M1P5 1343 aa17.85■□□□□ 0.45
HIF3A-204ENST00000300862 IRX6P78412 446 aaPredicted RBP17.85■□□□□ 0.45
HIF3A-204ENST00000300862 PRKRIP1Q9H875 184 aaPredicted RBP17.85■□□□□ 0.45
HIF3A-204ENST00000300862 FAM9BQ8IZU0 186 aa17.84■□□□□ 0.45
HIF3A-204ENST00000300862 POLR3GLQ9BT43 218 aa17.84■□□□□ 0.45
HIF3A-204ENST00000300862 ANKRD30AQ9BXX3 1397 aa17.84■□□□□ 0.45
HIF3A-204ENST00000300862 ITSN2Q9NZM3 1697 aa17.83■□□□□ 0.44
HIF3A-204ENST00000300862 SPATA31E1Q6ZUB1 1445 aa17.82■□□□□ 0.44
HIF3A-204ENST00000300862 ATP10BO94823 1461 aa17.82■□□□□ 0.44
HIF3A-204ENST00000300862 ANKRD50Q9ULJ7 1429 aa17.81■□□□□ 0.44
HIF3A-204ENST00000300862 KIAA1107Q9UPP5 1409 aa17.81■□□□□ 0.44
HIF3A-204ENST00000300862 HNRNPMP52272 730 aaKnown RBP eCLIP17.81■□□□□ 0.44
HIF3A-204ENST00000300862 MRS2Q9HD23 443 aa17.81■□□□□ 0.44
HIF3A-204ENST00000300862 NUP155O75694 1391 aa17.79■□□□□ 0.44
HIF3A-204ENST00000300862 ADCY10Q96PN6 1610 aa17.79■□□□□ 0.44
HIF3A-204ENST00000300862 ADGRL2O95490 1459 aa17.79■□□□□ 0.44
HIF3A-204ENST00000300862 ERICH6Q7L0X2 663 aa17.78■□□□□ 0.44
HIF3A-204ENST00000300862 ADGBQ8N7X0 1667 aa17.78■□□□□ 0.44
HIF3A-204ENST00000300862 TSPY4P0CV99 314 aa17.77■□□□□ 0.44
HIF3A-204ENST00000300862 TSPY10P0CW01 314 aa17.77■□□□□ 0.44
HIF3A-204ENST00000300862 ABCA8O94911 1581 aa17.77■□□□□ 0.44
HIF3A-204ENST00000300862 C9orf84Q5VXU9 1444 aa17.77■□□□□ 0.43
HIF3A-204ENST00000300862 ABCC10Q5T3U5 1492 aa17.76■□□□□ 0.43
HIF3A-204ENST00000300862 CROCC2H7BZ55 1655 aa17.76■□□□□ 0.43
HIF3A-204ENST00000300862 CDC42BPAQ5VT25 1732 aa17.75■□□□□ 0.43
HIF3A-204ENST00000300862 KDM2AQ9Y2K7 1162 aa17.75■□□□□ 0.43
HIF3A-204ENST00000300862 USP47Q96K76 1375 aa17.75■□□□□ 0.43
HIF3A-204ENST00000300862 BCL11AQ9H165 835 aa17.74■□□□□ 0.43
HIF3A-204ENST00000300862 RBM19Q9Y4C8 960 aaKnown RBP17.73■□□□□ 0.43
HIF3A-204ENST00000300862 PTPRGP23470 1445 aa17.73■□□□□ 0.43
HIF3A-204ENST00000300862 MBD5Q9P267 1494 aa17.72■□□□□ 0.43
HIF3A-204ENST00000300862 KIF15Q9NS87 1388 aa17.71■□□□□ 0.43
HIF3A-204ENST00000300862 SENP3-EIF4A1A0A087X0R7 540 aa17.69■□□□□ 0.42
HIF3A-204ENST00000300862 CARD11Q9BXL7 1154 aa17.68■□□□□ 0.42
HIF3A-204ENST00000300862 BCORL1Q5H9F3 1711 aa17.68■□□□□ 0.42
HIF3A-204ENST00000300862 DCAF11Q8TEB1 546 aa17.67■□□□□ 0.42
HIF3A-204ENST00000300862 DHX29Q7Z478 1369 aaKnown RBP17.66■□□□□ 0.42
HIF3A-204ENST00000300862 SHANK2Q9UPX8 1470 aa17.66■□□□□ 0.42
HIF3A-204ENST00000300862 ZBED9Q6R2W3 1325 aa17.63■□□□□ 0.41
HIF3A-204ENST00000300862 ST20-MTHFSA0A0A6YYL1 179 aa17.63■□□□□ 0.41
HIF3A-204ENST00000300862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.63■□□□□ 0.41
HIF3A-204ENST00000300862 POLR1AO95602 1720 aaPredicted RBP17.63■□□□□ 0.41
HIF3A-204ENST00000300862 KDM5CP41229 1560 aa17.61■□□□□ 0.41
HIF3A-204ENST00000300862 RGL3Q3MIN7 710 aa17.61■□□□□ 0.41
HIF3A-204ENST00000300862 SAMD9LQ8IVG5 1584 aa17.6■□□□□ 0.41
HIF3A-204ENST00000300862 UHRF1BP1Q6BDS2 1440 aa17.6■□□□□ 0.41
HIF3A-204ENST00000300862 CCDC141Q6ZP82 1450 aa17.59■□□□□ 0.41
HIF3A-204ENST00000300862 RALGAPBQ86X10 1494 aa17.59■□□□□ 0.41
HIF3A-204ENST00000300862 CDC42BPBQ9Y5S2 1711 aa17.58■□□□□ 0.4
HIF3A-204ENST00000300862 MSH5O43196 834 aa17.57■□□□□ 0.4
HIF3A-204ENST00000300862 KDM5DQ9BY66 1539 aa17.56■□□□□ 0.4
HIF3A-204ENST00000300862 ARHGEF5Q12774 1597 aa17.56■□□□□ 0.4
HIF3A-204ENST00000300862 SYCP2Q9BX26 1530 aa17.55■□□□□ 0.4
HIF3A-204ENST00000300862 FAM135AQ9P2D6 1515 aa17.55■□□□□ 0.4
HIF3A-204ENST00000300862 ROCK2O75116 1388 aaKnown RBP17.55■□□□□ 0.4
HIF3A-204ENST00000300862 ARHGAP5Q13017 1502 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms