RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 HSP90AA2PQ14568 343 aaPredicted RBP15.41■□□□□ 0.06
ERCC1-202ENST00000300853 MAPKBP1O60336 1514 aa15.41■□□□□ 0.06
ERCC1-202ENST00000300853 KIF7Q2M1P5 1343 aa15.39■□□□□ 0.05
ERCC1-202ENST00000300853 SPRYD3Q8NCJ5 442 aa15.38■□□□□ 0.05
ERCC1-202ENST00000300853 FRAT2O75474 233 aaPredicted RBP15.38■□□□□ 0.05
ERCC1-202ENST00000300853 CC2D1BQ5T0F9 858 aaKnown RBP15.38■□□□□ 0.05
ERCC1-202ENST00000300853 CRBNQ96SW2 442 aa15.37■□□□□ 0.05
ERCC1-202ENST00000300853 LRRC9Q6ZRR7 1453 aa15.37■□□□□ 0.05
ERCC1-202ENST00000300853 SMG6Q86US8 1419 aaKnown RBP15.36■□□□□ 0.05
ERCC1-202ENST00000300853 UACAQ9BZF9 1416 aa15.36■□□□□ 0.05
ERCC1-202ENST00000300853 FHOD3Q2V2M9 1422 aa15.35■□□□□ 0.05
ERCC1-202ENST00000300853 EIF4G1Q04637 1599 aaKnown RBP15.35■□□□□ 0.05
ERCC1-202ENST00000300853 FAM161AQ3B820 660 aa15.35■□□□□ 0.05
ERCC1-202ENST00000300853 FAM43AQ8N2R8 423 aa15.34■□□□□ 0.05
ERCC1-202ENST00000300853 GOLGA6L3A6NEY3 463 aa15.33■□□□□ 0.04
ERCC1-202ENST00000300853 PDE3BQ13370 1112 aa15.33■□□□□ 0.04
ERCC1-202ENST00000300853 PRXQ9BXM0 1461 aa15.31■□□□□ 0.04
ERCC1-202ENST00000300853 C11orf95C9JLR9 678 aaPredicted RBP15.31■□□□□ 0.04
ERCC1-202ENST00000300853 RALBP1Q15311 655 aa15.31■□□□□ 0.04
ERCC1-202ENST00000300853 ERICH3Q5RHP9 1530 aa15.31■□□□□ 0.04
ERCC1-202ENST00000300853 SKAP1Q86WV1 359 aa15.3■□□□□ 0.04
ERCC1-202ENST00000300853 NLRP13Q86W25 1043 aa15.29■□□□□ 0.04
ERCC1-202ENST00000300853 CENPQQ7L2Z9 268 aaPredicted RBP15.28■□□□□ 0.04
ERCC1-202ENST00000300853 RGL3Q3MIN7 710 aa15.28■□□□□ 0.04
ERCC1-202ENST00000300853 MYBBP1AQ9BQG0 1328 aaKnown RBP15.27■□□□□ 0.04
ERCC1-202ENST00000300853 KTN1Q86UP2 1357 aaKnown RBP15.27■□□□□ 0.03
ERCC1-202ENST00000300853 FGD6Q6ZV73 1430 aa15.27■□□□□ 0.03
ERCC1-202ENST00000300853 CDCA7LQ96GN5 454 aa15.25■□□□□ 0.03
ERCC1-202ENST00000300853 PNISRQ8TF01 805 aaKnown RBP15.25■□□□□ 0.03
ERCC1-202ENST00000300853 KIF15Q9NS87 1388 aa15.24■□□□□ 0.03
ERCC1-202ENST00000300853 MYH16Q9H6N6 1097 aa15.24■□□□□ 0.03
ERCC1-202ENST00000300853 DCAF11Q8TEB1 546 aa15.24■□□□□ 0.03
ERCC1-202ENST00000300853 NBPF8Q3BBV2 869 aa15.23■□□□□ 0.03
ERCC1-202ENST00000300853 USP47Q96K76 1375 aa15.23■□□□□ 0.03
ERCC1-202ENST00000300853 TIAM1Q13009 1591 aa15.23■□□□□ 0.03
ERCC1-202ENST00000300853 WASHC2CQ9Y4E1 1318 aa15.23■□□□□ 0.03
ERCC1-202ENST00000300853 PKD2Q13563 968 aa15.21■□□□□ 0.03
ERCC1-202ENST00000300853 ARID3AQ99856 593 aa15.21■□□□□ 0.03
ERCC1-202ENST00000300853 KNSTRNQ9Y448 316 aa15.21■□□□□ 0.03
ERCC1-202ENST00000300853 ROCK2O75116 1388 aaKnown RBP15.21■□□□□ 0.02
ERCC1-202ENST00000300853 ST20-MTHFSA0A0A6YYL1 179 aa15.2■□□□□ 0.02
ERCC1-202ENST00000300853 NCLP19338 710 aaKnown RBP15.2■□□□□ 0.02
ERCC1-202ENST00000300853 GOLGA6L22H0YM25 854 aa15.19■□□□□ 0.02
ERCC1-202ENST00000300853 NEUROD2Q15784 382 aa15.18■□□□□ 0.02
ERCC1-202ENST00000300853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.18■□□□□ 0.025e-7■■□□□ 12.5
ERCC1-202ENST00000300853 POGKQ9P215 609 aa15.18■□□□□ 0.02
ERCC1-202ENST00000300853 IGF1RP08069 1367 aa15.18■□□□□ 0.02
ERCC1-202ENST00000300853 ATAD2BQ9ULI0 1458 aa15.18■□□□□ 0.02
ERCC1-202ENST00000300853 MSNP26038 577 aaKnown RBP15.17■□□□□ 0.02
ERCC1-202ENST00000300853 HSCBQ8IWL3 235 aa15.17■□□□□ 0.02
ERCC1-202ENST00000300853 HFM1A2PYH4 1435 aa15.17■□□□□ 0.02
ERCC1-202ENST00000300853 TSPY4P0CV99 314 aa15.16■□□□□ 0.02
ERCC1-202ENST00000300853 TSPY10P0CW01 314 aa15.16■□□□□ 0.02
ERCC1-202ENST00000300853 CFDP1Q9UEE9 299 aaPredicted RBP15.16■□□□□ 0.02
ERCC1-202ENST00000300853 GOLGA2Q08379 1002 aa15.15■□□□□ 0.02
ERCC1-202ENST00000300853 HSP90AB1P08238 724 aaKnown RBP15.14■□□□□ 0.01
ERCC1-202ENST00000300853 ZMYND15Q9H091 742 aa15.13■□□□□ 0.01
ERCC1-202ENST00000300853 NCOA1Q15788 1441 aa15.12■□□□□ 0.01
ERCC1-202ENST00000300853 BRD4O60885 1362 aaPredicted RBP15.12■□□□□ 0.01
ERCC1-202ENST00000300853 NAIPQ13075 1403 aa15.11■□□□□ 0.01
ERCC1-202ENST00000300853 TOP2BQ02880 1626 aa15.11■□□□□ 0.01
ERCC1-202ENST00000300853 TNNT2P45379 298 aaPredicted RBP15.11■□□□□ 0.01
ERCC1-202ENST00000300853 MYOM3Q5VTT5 1437 aa15.11■□□□□ 0.01
ERCC1-202ENST00000300853 MFAP1P55081 439 aaKnown RBP15.1■□□□□ 0.01
ERCC1-202ENST00000300853 DNTTIP2Q5QJE6 756 aaKnown RBP15.1■□□□□ 0.01
ERCC1-202ENST00000300853 FTSJ3Q8IY81 847 aaKnown RBP15.09■□□□□ 0.01
ERCC1-202ENST00000300853 RRP9O43818 475 aaKnown RBP15.09■□□□□ 0.01
ERCC1-202ENST00000300853 PTMAP06454 111 aaKnown RBP15.09■□□□□ 0.01
ERCC1-202ENST00000300853 TMF1P82094 1093 aa15.09■□□□□ 0.01
ERCC1-202ENST00000300853 CCDC146Q8IYE0 955 aa15.09■□□□□ 0.01
ERCC1-202ENST00000300853 MAPK8IP3Q9UPT6 1336 aa15.08■□□□□ 0
ERCC1-202ENST00000300853 GBP4Q96PP9 640 aa15.07■□□□□ 0
ERCC1-202ENST00000300853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.07■□□□□ 07e-7■■■■■ 52.8
ERCC1-202ENST00000300853 C20orf194Q5TEA3 1177 aa15.06■□□□□ 0
ERCC1-202ENST00000300853 COG6Q9Y2V7 657 aa15.05■□□□□ -0
ERCC1-202ENST00000300853 PANK3Q9H999 370 aa15.05■□□□□ -0
ERCC1-202ENST00000300853 CASKIN1Q8WXD9 1431 aa15.05■□□□□ -0
ERCC1-202ENST00000300853 NCOA2Q15596 1464 aa15.04■□□□□ -0
ERCC1-202ENST00000300853 MRE11P49959 708 aa15.04■□□□□ -0
ERCC1-202ENST00000300853 ZBTB7CA1YPR0 619 aa15.04■□□□□ -0
ERCC1-202ENST00000300853 DDX11L8A8MPP1 907 aa15.04■□□□□ -0
ERCC1-202ENST00000300853 CLUAP1Q96AJ1 413 aa15.04■□□□□ -0
ERCC1-202ENST00000300853 RNF123Q5XPI4 1314 aa15.03■□□□□ -0
ERCC1-202ENST00000300853 FBLN2P98095 1184 aa15.03■□□□□ -0
ERCC1-202ENST00000300853 TRAK2O60296 914 aa15.03■□□□□ -0
ERCC1-202ENST00000300853 FOXD4L1Q9NU39 408 aa15.03■□□□□ -0
ERCC1-202ENST00000300853 FAM13BQ9NYF5 915 aa15.03■□□□□ -0
ERCC1-202ENST00000300853 CHMP5Q9NZZ3 219 aa15.03■□□□□ -0
ERCC1-202ENST00000300853 MAP3K1Q13233 1512 aa15.02■□□□□ -0
ERCC1-202ENST00000300853 PODXL2Q9NZ53 605 aa15.02■□□□□ -0
ERCC1-202ENST00000300853 PMFBP1Q8TBY8 1022 aa15.02■□□□□ -0
ERCC1-202ENST00000300853 RWDD1Q9H446 243 aaPredicted RBP15.02□□□□□ -0.01
ERCC1-202ENST00000300853 NUP155O75694 1391 aa15.02□□□□□ -0.01
ERCC1-202ENST00000300853 FYCO1Q9BQS8 1478 aa15.01□□□□□ -0.01
ERCC1-202ENST00000300853 CENPJQ9HC77 1338 aaPredicted RBP15□□□□□ -0.01
ERCC1-202ENST00000300853 A0A0U1RQG5 324 aaPredicted RBP15□□□□□ -0.01
ERCC1-202ENST00000300853 RRAGDQ9NQL2 400 aaPredicted RBP15□□□□□ -0.01
ERCC1-202ENST00000300853 CFTRP13569 1480 aa15□□□□□ -0.01
ERCC1-202ENST00000300853 ESPNB1AK53 854 aa15□□□□□ -0.01
ERCC1-202ENST00000300853 CDCA8Q53HL2 280 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms